FN1559-S Chr1 10051794 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr1 13683846 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr1 14293372 14293390 0 0 Deletion 18 FN1559-S Chr1 16601881 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr1 17610435 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr1 17610446 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr1 20904982 20904982 0 0 Insertion 2 FN1559-S Chr1 24338155 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr1 26582459 26582459 0 0 Insertion 2 FN1559-S Chr1 32817984 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g56820 AGAP000951-PA, putative, expressed FN1559-S Chr1 38952881 38952895 0 0 Deletion 14 FN1559-S Chr1 6378936 C-T 0 0 Single Base Substitution 0 INTRON Homo FN1559-S Chr1 6378937 A-C 0 0 Single Base Substitution 0 INTRON Homo FN1559-S Chr1 8744515 8744516 0 0 Deletion 1 FN1559-S Chr10 12587234 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g24520 retrotransposon protein, putative, Ty3-gypsy subclass FN1559-S Chr10 15468601 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1559-S Chr10 18119507 18119512 0 0 Deletion 5 FN1559-S Chr10 26902 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1559-S Chr10 3824825 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr10 7668455 7668476 0 0 Deletion 21 FN1559-S Chr10 9644226 A-G 0 0 Single Base Substitution 0 INTRON HET FN1559-S Chr11 11735399 11735404 0 0 Deletion 5 FN1559-S Chr11 16562250 16562254 0 0 Deletion 4 FN1559-S Chr11 18944413 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr11 24399163 24399168 0 0 Deletion 5 FN1559-S Chr12 17145481 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr12 17648776 17648790 0 0 Deletion 14 FN1559-S Chr12 23924680 23924682 0 0 Deletion 2 FN1559-S Chr12 2979479 3193048 0 0 Inversion 213569 LOC_Os12g06260 harpin-induced protein 1 domain containing protein, expressed FN1559-S Chr12 2979479 3193048 0 0 Inversion 213569 LOC_Os12g06580 retrotransposon protein, putative, Ty1-copia subclass FN1559-S Chr12 3959845 3959845 0 0 Insertion 2 FN1559-S Chr2 12079171 12079172 0 0 Deletion 1 FN1559-S Chr2 1580074 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr2 23301094 23301094 0 0 Insertion 1 FN1559-S Chr2 26304188 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1559-S Chr2 29830175 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1559-S Chr2 9418179 9418181 0 0 Deletion 2 FN1559-S Chr3 13678381 13678390 0 0 Deletion 9 FN1559-S Chr3 14127239 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1559-S Chr3 15413771 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g26960 intron-binding protein aquarius, putative, expressed FN1559-S Chr3 19272508 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g33700 retrotransposon protein, putative, unclassified, expressed FN1559-S Chr3 20481567 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr3 29025283 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr3 30745490 30745490 0 0 Insertion 1 FN1559-S Chr4 23578503 23578505 0 0 Deletion 2 FN1559-S Chr4 23624265 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1559-S Chr4 3503148 3503149 0 0 Deletion 1 FN1559-S Chr4 3964304 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1559-S Chr5 11225195 11225210 0 0 Deletion 15 LOC_Os05g19310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1559-S Chr5 11425184 11425184 0 0 Insertion 1 FN1559-S Chr5 11477980 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr5 12662134 12662134 0 0 Insertion 1 FN1559-S Chr5 25660375 25660377 0 0 Deletion 2 FN1559-S Chr5 29605817 29605817 0 0 Insertion 36 FN1559-S Chr5 5217207 5217207 0 0 Insertion 34 FN1559-S Chr5 531804 531804 0 0 Insertion 30 FN1559-S Chr5 7929188 7929193 0 0 Deletion 5 FN1559-S Chr5 8664270 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1559-S Chr6 10202955 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1559-S Chr6 13442360 13868415 0 0 Inversion 426055 LOC_Os06g23040 expressed protein FN1559-S Chr6 13442360 13868415 0 0 Inversion 426055 LOC_Os06g23730 retrotransposon, putative, centromere-specific FN1559-S Chr6 14026068 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1559-S Chr6 14857211 14857212 0 0 Deletion 1 FN1559-S Chr6 23677324 23677325 0 0 Deletion 1 FN1559-S Chr6 24322010 24322028 0 0 Deletion 18 FN1559-S Chr6 4343114 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1559-S Chr6 938723 A-G 0 0 Single Base Substitution 0 INTRON Homo FN1559-S Chr7 19044128 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1559-S Chr7 19156138 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1559-S Chr7 25649053 C-A 0 0 Single Base Substitution 0 UTR_5_PRIME Homo FN1559-S Chr7 3542988 3542988 0 0 Insertion 1 FN1559-S Chr7 6864161 6864164 0 0 Deletion 3 FN1559-S Chr8 2725878 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g05240 retrotransposon protein, putative, unclassified, expressed FN1559-S Chr8 8807498 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1559-S Chr9 10471879 10472007 0 0 Deletion 128 FN1559-S Chr9 4349164 4349165 0 0 Deletion 1 FN1559-S Chr9 7435641 11121071 0 0 Inversion 3685430 FN1559-S Chr9 7439012 11132047 0 0 Inversion 3693035 LOC_Os09g12910 expressed protein FN1559-S Chr9 7439012 11132047 0 0 Inversion 3693035 LOC_Os09g18159 light repressible receptor protein kinase, putative, expressed FN1559-S Chr9 7614956 7614957 0 0 Deletion 1 FN1559-S Chr9 8832951 T-G 0 0 Single Base Substitution 0 INTERGENIC HET