FN1561-S Chr1 10242633 10242634 0 0 Deletion 1 FN1561-S Chr1 10546350 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g18700 retrotransposon protein, putative, unclassified, expressed FN1561-S Chr1 13723501 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr1 14681959 14681959 0 0 Insertion 4 FN1561-S Chr1 15232696 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr1 15664982 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr1 16290790 16290791 0 0 Deletion 1 FN1561-S Chr1 19685526 A-T 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr1 24292437 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1561-S Chr1 30087385 30087385 0 0 Insertion 1 FN1561-S Chr1 39533490 39533514 0 0 Deletion 24 FN1561-S Chr1 39667120 G-A 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr1 40371445 40748258 0 0 Inversion 376813 LOC_Os01g70340 expressed protein FN1561-S Chr1 40516455 40516456 0 0 Deletion 1 FN1561-S Chr1 8219688 8219690 0 0 Deletion 2 FN1561-S Chr10 11061856 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr10 15038340 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr10 609301 609302 0 0 Deletion 1 FN1561-S Chr10 7770267 7770268 0 0 Deletion 1 FN1561-S Chr10 9351973 G-A 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr11 10844075 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr11 13256182 G-A 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr11 13928659 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr11 14806545 14806553 0 0 Deletion 8 FN1561-S Chr11 15175691 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g26480 retrotransposon, putative, centromere-specific FN1561-S Chr11 16798793 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr11 20177120 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr11 22562917 22562917 0 0 Insertion 2 FN1561-S Chr11 25434957 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr11 8457811 8476601 0 0 Inversion 18790 LOC_Os11g15030 SAM dependent carboxyl methyltransferase, putative, expressed FN1561-S Chr11 8457815 Chr4 34434699 0 Translocation 0 LOC_Os11g15030 SAM dependent carboxyl methyltransferase, putative, expressed FN1561-S Chr11 8458705 Chr4 34435452 0 Translocation 0 LOC_Os11g15030 SAM dependent carboxyl methyltransferase, putative, expressed FN1561-S Chr11 8476603 8513902 0 0 Inversion 37299 LOC_Os11g15120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1561-S Chr11 9047887 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr12 12091021 12091021 0 0 Insertion 12 FN1561-S Chr12 18801542 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr12 18801543 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr12 18897960 18897963 0 0 Deletion 3 FN1561-S Chr12 19761757 19761768 0 0 Deletion 11 FN1561-S Chr12 26357669 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1561-S Chr12 4435501 4435501 0 0 Insertion 2 FN1561-S Chr12 5665446 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr12 6919730 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr12 8032818 T-C 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr2 16436186 16436187 0 0 Deletion 1 LOC_Os02g27750 transposon protein, putative, unclassified, expressed FN1561-S Chr2 18802620 18802621 0 0 Deletion 1 FN1561-S Chr2 2791140 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1561-S Chr2 29921110 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr2 31215776 31215777 0 0 Deletion 1 FN1561-S Chr2 3598467 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1561-S Chr2 6638812 6638820 0 0 Deletion 8 LOC_Os02g12690 cytochrome P450, putative, expressed FN1561-S Chr3 19366749 A-G 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr3 20832214 C-T 0 0 Single Base Substitution 0 INTRON Homo FN1561-S Chr3 23248550 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1561-S Chr3 24070052 24070059 0 0 Deletion 7 FN1561-S Chr3 30157618 C-T 0 0 Single Base Substitution 0 INTRON Homo FN1561-S Chr3 31637977 31637983 0 0 Deletion 6 FN1561-S Chr3 4512859 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr3 7129959 C-T 0 0 Single Base Substitution 0 INTRON Homo FN1561-S Chr3 8491716 8491716 0 0 Insertion 1 FN1561-S Chr4 10630720 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr4 11128621 11128622 0 0 Deletion 1 FN1561-S Chr4 11145129 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g19990 retrotransposon protein, putative, unclassified, expressed FN1561-S Chr4 16812853 16812854 0 0 Deletion 1 FN1561-S Chr4 16965101 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr4 17016600 17016612 0 0 Deletion 12 FN1561-S Chr4 20270409 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr4 23435488 23435495 0 0 Deletion 7 FN1561-S Chr4 26335759 26335763 0 0 Deletion 4 FN1561-S Chr4 2902454 C-T 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr4 5066942 5066943 0 0 Deletion 1 FN1561-S Chr4 7471318 7471318 0 0 Insertion 1 FN1561-S Chr4 8774490 8774494 0 0 Deletion 4 FN1561-S Chr5 12804950 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr5 14170159 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr5 14520416 14520416 0 0 Insertion 2 FN1561-S Chr5 17516657 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g30220 disease resistance RPP13-like protein 1, putative, expressed FN1561-S Chr5 27210441 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr5 27791966 27791967 0 0 Deletion 1 FN1561-S Chr5 27923625 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g48710 expressed protein FN1561-S Chr5 5556666 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr6 11183396 11183418 0 0 Deletion 22 FN1561-S Chr6 13029627 13029628 0 0 Deletion 1 FN1561-S Chr6 13086576 13086584 0 0 Deletion 8 LOC_Os06g22520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1561-S Chr6 15747380 Chr4 19596842 0 Translocation 0 FN1561-S Chr6 17973048 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr6 20382925 20382928 0 0 Deletion 3 FN1561-S Chr6 20496905 20496906 0 0 Deletion 1 FN1561-S Chr6 24284966 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr6 24604853 24604854 0 0 Deletion 1 FN1561-S Chr6 24658443 24658464 0 0 Deletion 21 FN1561-S Chr6 2906012 2906012 0 0 Insertion 6 FN1561-S Chr6 29095453 29107115 0 0 Deletion 11662 LOC_Os06g48090 retrotransposon protein, putative, unclassified, expressed FN1561-S Chr6 29095453 29107115 0 0 Deletion 11662 LOC_Os06g48100 retrotransposon protein, putative, unclassified, expressed FN1561-S Chr6 4767770 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr6 5855839 5855839 0 0 Insertion 6 FN1561-S Chr7 11354958 11354960 0 0 Deletion 2 FN1561-S Chr7 12403177 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1561-S Chr7 170870 170873 0 0 Deletion 3 FN1561-S Chr7 19245128 19245131 0 0 Deletion 3 FN1561-S Chr7 22370967 22370974 0 0 Deletion 7 LOC_Os07g37350 armadillo/beta-catenin repeat family protein, putative, expressed FN1561-S Chr7 3855484 3855486 0 0 Deletion 2 FN1561-S Chr7 9728966 9728969 0 0 Deletion 3 FN1561-S Chr8 11336106 11336107 0 0 Deletion 1 LOC_Os08g18990 retrotransposon protein, putative, unclassified, expressed FN1561-S Chr8 13813346 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr8 13898483 13898484 0 0 Deletion 1 FN1561-S Chr8 14441033 14441034 0 0 Deletion 1 FN1561-S Chr8 15166096 15237330 0 0 Inversion 71234 LOC_Os08g25010 TBC domain containing protein, expressed FN1561-S Chr8 15237319 15320761 0 0 Inversion 83442 FN1561-S Chr8 16840942 16840942 0 0 Insertion 1 FN1561-S Chr8 24826593 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1561-S Chr8 25703346 A-T 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr8 27540871 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1561-S Chr8 9230878 9230878 0 0 Insertion 26 FN1561-S Chr8 9670621 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g15880 NBS-LRR disease resistance protein, putative, expressed FN1561-S Chr8 9912385 9912387 0 0 Deletion 2 FN1561-S Chr9 10077839 C-A 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr9 10816466 10816467 0 0 Deletion 1 FN1561-S Chr9 19575681 19581250 0 0 Deletion 5569 LOC_Os09g32830 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed FN1561-S Chr9 19674789 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1561-S Chr9 19674790 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g32964 peroxidase precursor, putative, expressed FN1561-S Chr9 22410881 G-A 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr9 3997712 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g07860 retrotransposon protein, putative, unclassified FN1561-S Chr9 5235311 T-C 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr9 697206 C-T 0 0 Single Base Substitution 0 INTRON HET FN1561-S Chr9 8023478 8023481 0 0 Deletion 3 LOC_Os09g13710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1561-S Chr9 8610790 8610791 0 0 Deletion 1 FN1561-S Chr9 9055287 9055288 0 0 Deletion 1 LOC_Os09g15020 retrotransposon protein, putative, unclassified, expressed