FN1563-S Chr1 13172887 13172888 0 0 Deletion 1 FN1563-S Chr1 17951280 A-T 0 0 Single Base Substitution 0 INTRON Homo FN1563-S Chr1 19983252 19983253 0 0 Deletion 1 LOC_Os01g36120 expressed protein FN1563-S Chr1 2040349 2040353 0 0 Deletion 4 FN1563-S Chr1 27134019 27134019 0 0 Insertion 2 LOC_Os01g47470 serine/threonine-protein kinase, putative, expressed FN1563-S Chr1 28124056 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1563-S Chr1 28471704 28471714 0 0 Deletion 10 FN1563-S Chr1 29168337 29168358 0 0 Deletion 21 FN1563-S Chr1 3312874 3315206 0 0 Deletion 2332 LOC_Os01g07030 POEI40 - Pollen Ole e I allergen and extensin family protein precursor, expressed FN1563-S Chr1 3312874 3315206 0 0 Deletion 2332 LOC_Os01g07040 POEI41 - Pollen Ole e I allergen and extensin family protein precursor, expressed FN1563-S Chr1 34079544 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1563-S Chr1 35770112 35770112 0 0 Insertion 2 FN1563-S Chr1 35977553 35977555 0 0 Deletion 2 FN1563-S Chr1 36861452 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1563-S Chr1 9307313 T-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1563-S Chr10 12117486 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1563-S Chr10 12590164 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g24530 retrotransposon protein, putative, Ty3-gypsy subclass FN1563-S Chr10 18605262 18605262 0 0 Insertion 60 FN1563-S Chr10 2543903 2543903 0 0 Insertion 33 LOC_Os10g05190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1563-S Chr10 6740454 6740455 0 0 Deletion 1 FN1563-S Chr10 9198301 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1563-S Chr11 15168301 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1563-S Chr11 17093579 G-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os11g29450 retrotransposon protein, putative, unclassified, expressed FN1563-S Chr11 25515776 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1563-S Chr12 17141968 17141968 0 0 Insertion 2 FN1563-S Chr12 19915787 19915799 0 0 Deletion 12 FN1563-S Chr12 24848070 24917872 0 0 Inversion 69802 FN1563-S Chr12 27143135 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1563-S Chr2 1506254 1506254 0 0 Insertion 2 FN1563-S Chr2 2137491 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1563-S Chr2 2137493 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1563-S Chr2 29551509 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g48290 thioredoxin reductase 2, putative, expressed FN1563-S Chr2 29551510 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1563-S Chr2 29632464 29632464 0 0 Insertion 1 FN1563-S Chr2 4647994 4647995 0 0 Deletion 1 FN1563-S Chr3 14556294 14556329 0 0 Deletion 35 FN1563-S Chr3 18215405 18215414 0 0 Deletion 9 FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g31992 retrotransposon protein, putative, Ty3-gypsy subclass FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32010 hypothetical protein FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32020 conserved hypothetical protein FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32030 DNA-directed RNA polymerase II subunit RPB1, putative, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32040 phenazine biosynthesis protein, putative, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32050 peroxidase precursor, putative, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32070 retrotransposon protein, putative, unclassified, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32090 pentatricopeptide, putative, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32100 spotted leaf 11, putative, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32119 retrotransposon protein, putative, unclassified, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32140 expressed protein FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32150 expressed protein FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32160 calmodulin binding protein, putative, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32170 NAD dependent epimerase/dehydratase family protein, putative, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32180 polygalacturonase inhibitor 1 precursor, putative, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32190 transposon protein, putative, unclassified, expressed FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32200 expressed protein FN1563-S Chr3 18300001 18428000 0 0 Deletion 128000 LOC_Os03g32210 retrotransposon protein, putative, unclassified FN1563-S Chr3 19594721 19737436 0 0 Inversion 142715 LOC_Os03g35340 expressed protein FN1563-S Chr3 19594721 19737436 0 0 Inversion 142715 LOC_Os03g35620 expressed protein FN1563-S Chr3 19597153 19922450 0 0 Inversion 325297 LOC_Os03g35340 expressed protein FN1563-S Chr3 26766752 26766761 0 0 Deletion 9 FN1563-S Chr3 27054328 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1563-S Chr3 3505290 3505290 0 0 Insertion 1 FN1563-S Chr3 7333578 7333589 0 0 Deletion 11 FN1563-S Chr3 9783060 9783060 0 0 Insertion 1 FN1563-S Chr4 12799540 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1563-S Chr4 17081042 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1563-S Chr4 18853573 18853573 0 0 Insertion 44 FN1563-S Chr4 2305618 2305618 0 0 Insertion 1 FN1563-S Chr4 29823676 29823693 0 0 Deletion 17 LOC_Os04g50010 hypothetical protein FN1563-S Chr4 34100214 34100220 0 0 Deletion 6 FN1563-S Chr5 1936660 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g04250 expressed protein FN1563-S Chr5 23726251 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1563-S Chr5 27762798 27762806 0 0 Deletion 8 FN1563-S Chr5 6287691 Chr3 19597146 0 Translocation 0 LOC_Os03g35340 expressed protein FN1563-S Chr5 6287695 Chr3 19594748 0 Translocation 0 LOC_Os03g35340 expressed protein FN1563-S Chr6 15553460 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g27470 retrotransposon, putative, centromere-specific FN1563-S Chr6 15988354 15988354 0 0 Insertion 2 FN1563-S Chr6 23042672 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1563-S Chr6 4214009 4214012 0 0 Deletion 3 FN1563-S Chr6 8712959 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1563-S Chr6 8927647 8927657 0 0 Deletion 10 FN1563-S Chr6 8981674 8981674 0 0 Insertion 2 FN1563-S Chr7 10483236 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1563-S Chr7 13271855 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1563-S Chr7 18708336 18708343 0 0 Deletion 7 FN1563-S Chr8 10244432 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1563-S Chr8 14445514 14445514 0 0 Insertion 2 FN1563-S Chr8 15137422 15137422 0 0 Insertion 2 FN1563-S Chr8 20191517 20191519 0 0 Deletion 2 FN1563-S Chr8 2230406 2395465 0 0 Inversion 165059 FN1563-S Chr8 25434676 25434678 0 0 Deletion 2 FN1563-S Chr8 26568155 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1563-S Chr8 7744849 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1563-S Chr9 20231379 20231380 0 0 Deletion 1 FN1563-S Chr9 22474988 22474988 0 0 Insertion 57 FN1563-S Chr9 4781773 4781773 0 0 Insertion 2