FN1565-S Chr1 18874130 18880574 0 0 Deletion 6444 LOC_Os01g34230 retrotransposon protein, putative, Ty3-gypsy subclass FN1565-S Chr1 18874130 18880574 0 0 Deletion 6444 LOC_Os01g34240 retrotransposon protein, putative, Ty3-gypsy subclass FN1565-S Chr1 18874130 18880574 0 0 Deletion 6444 LOC_Os01g34250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1565-S Chr1 27025804 27026182 0 0 Deletion 378 FN1565-S Chr1 31300977 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr1 38799864 38799864 0 0 Insertion 2 FN1565-S Chr1 40896618 41008621 0 0 Inversion 112003 LOC_Os01g70860 esterase, putative, expressed FN1565-S Chr1 4909131 4909131 0 0 Insertion 4 LOC_Os01g09570 6-phosphofructokinase, putative, expressed FN1565-S Chr1 5284523 5284523 0 0 Insertion 2 FN1565-S Chr1 9134165 C-T 0 0 Single Base Substitution 0 INTRON HET FN1565-S Chr10 13842581 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr10 19118966 19118966 0 0 Insertion 1 FN1565-S Chr11 10581486 G-T 0 0 Single Base Substitution 0 INTRON HET FN1565-S Chr11 15339862 15339864 0 0 Deletion 2 FN1565-S Chr11 15774660 15774663 0 0 Deletion 3 LOC_Os11g27410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1565-S Chr11 19649004 Chr1 18880597 0 Translocation 0 LOC_Os01g34250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1565-S Chr11 22130900 22130900 0 0 Insertion 30 FN1565-S Chr11 22790210 22790210 0 0 Insertion 2 FN1565-S Chr12 10092483 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g17620 retrotransposon protein, putative, unclassified, expressed FN1565-S Chr12 14409151 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1565-S Chr12 3653299 3653299 0 0 Insertion 4 FN1565-S Chr2 13871482 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr2 13965549 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr2 15211763 A-G 0 0 Single Base Substitution 0 INTRON HET FN1565-S Chr2 15876877 15876877 0 0 Insertion 2 FN1565-S Chr2 30406480 30406482 0 0 Deletion 2 FN1565-S Chr2 34769003 34769012 0 0 Deletion 9 FN1565-S Chr3 1403813 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1565-S Chr3 1403814 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g03270 fringe-related protein, putative, expressed FN1565-S Chr3 24547225 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr3 25670560 25670560 0 0 Insertion 1 FN1565-S Chr3 35283026 35283026 0 0 Insertion 1 FN1565-S Chr4 13643676 C-T 0 0 Single Base Substitution 0 INTRON HET FN1565-S Chr4 22571352 22571358 0 0 Deletion 6 FN1565-S Chr4 29559382 T-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN1565-S Chr4 3131103 3131118 0 0 Deletion 15 FN1565-S Chr4 34962084 35161616 0 0 Inversion 199532 LOC_Os04g58780 pentatricopeptide repeat protein, putative, expressed FN1565-S Chr4 34962084 35161616 0 0 Inversion 199532 LOC_Os04g59100 retrotransposon protein, putative, unclassified, expressed FN1565-S Chr4 8623823 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1565-S Chr5 1056479 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1565-S Chr5 1418980 1418994 0 0 Deletion 14 LOC_Os05g03410 expressed protein FN1565-S Chr5 14802562 14802562 0 0 Insertion 1 FN1565-S Chr5 16704311 16704319 0 0 Deletion 8 LOC_Os05g28520 MRH1, putative, expressed FN1565-S Chr5 17728207 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr5 25149287 25149303 0 0 Deletion 16 FN1565-S Chr5 3202191 3202217 0 0 Deletion 26 FN1565-S Chr5 3223267 3223268 0 0 Deletion 1 FN1565-S Chr5 325308 325309 0 0 Deletion 1 FN1565-S Chr5 6658731 7994713 0 0 Inversion 1335982 LOC_Os05g11730 CGMC_GSK.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed FN1565-S Chr5 7922188 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr5 8451850 8451851 0 0 Deletion 1 FN1565-S Chr5 9361426 A-T 0 0 Single Base Substitution 0 INTRON HET FN1565-S Chr6 10714019 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1565-S Chr6 10858551 10858555 0 0 Deletion 4 FN1565-S Chr6 13081288 13082914 0 0 Deletion 1626 LOC_Os06g22510 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1565-S Chr6 13421983 C-T 0 0 Single Base Substitution 0 INTRON HET FN1565-S Chr6 1539342 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g03830 retinol dehydrogenase, putative, expressed FN1565-S Chr6 15835133 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g27900 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1565-S Chr6 19598851 19598856 0 0 Deletion 5 FN1565-S Chr6 24778654 24778664 0 0 Deletion 10 FN1565-S Chr6 26326080 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr6 27083846 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr6 7957747 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr7 11644610 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g20170 actin-depolymerizing factor, putative, expressed FN1565-S Chr7 13733594 13733595 0 0 Deletion 1 FN1565-S Chr7 14601802 14601802 0 0 Insertion 1 FN1565-S Chr7 15855178 15855178 0 0 Insertion 6 FN1565-S Chr7 16268550 16268578 0 0 Deletion 28 FN1565-S Chr7 18220433 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr7 208063 208063 0 0 Insertion 2 FN1565-S Chr7 24084870 24084883 0 0 Deletion 13 FN1565-S Chr7 24161355 24161359 0 0 Deletion 4 FN1565-S Chr7 26079906 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr7 27412774 27412774 0 0 Insertion 1 FN1565-S Chr7 27800586 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g46550 annexin, putative, expressed FN1565-S Chr7 7296632 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr8 16403001 16434000 0 0 Deletion 31000 LOC_Os08g26900 retrotransposon protein, putative, Ty3-gypsy subclass FN1565-S Chr8 16403001 16434000 0 0 Deletion 31000 LOC_Os08g26910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1565-S Chr8 16403001 16434000 0 0 Deletion 31000 LOC_Os08g26920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1565-S Chr8 16403001 16434000 0 0 Deletion 31000 LOC_Os08g26930 transposon protein, putative, CACTA, En/Spm sub-class FN1565-S Chr8 17862621 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr8 5256277 6432462 0 0 Inversion 1176185 LOC_Os08g10920 retrotransposon protein, putative, unclassified, expressed FN1565-S Chr8 6616602 6616621 0 0 Deletion 19 FN1565-S Chr8 6618116 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1565-S Chr9 15022001 15055000 0 0 Deletion 33000 LOC_Os09g25100 CAMK_KIN1/SNF1/Nim1_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN1565-S Chr9 15022001 15055000 0 0 Deletion 33000 LOC_Os09g25110 transposon protein, putative, unclassified FN1565-S Chr9 15022001 15055000 0 0 Deletion 33000 LOC_Os09g25120 transposon protein, putative, unclassified, expressed FN1565-S Chr9 21604482 21604495 0 0 Deletion 13 FN1565-S Chr9 9796427 9796430 0 0 Deletion 3