FN1568-S Chr1 14149775 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1568-S Chr1 23103354 23103364 0 0 Deletion 10 FN1568-S Chr1 26792150 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g46950 aldose 1-epimerase, putative, expressed FN1568-S Chr1 27933585 27933585 0 0 Insertion 2 FN1568-S Chr1 30276415 30276415 0 0 Insertion 2 FN1568-S Chr1 32335278 G-A 0 0 Single Base Substitution 0 INTRON HET FN1568-S Chr1 32543954 32543969 0 0 Deletion 15 FN1568-S Chr1 34523434 34523435 0 0 Deletion 1 FN1568-S Chr1 36423308 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1568-S Chr1 4634006 4634006 0 0 Insertion 25 FN1568-S Chr1 5364970 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1568-S Chr1 7284691 7284691 0 0 Insertion 8 FN1568-S Chr1 9084020 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1568-S Chr10 10043080 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g20020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1568-S Chr10 1820324 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1568-S Chr10 2066447 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1568-S Chr10 2484291 G-A 0 0 Single Base Substitution 0 INTRON HET FN1568-S Chr10 4586821 4586822 0 0 Deletion 1 FN1568-S Chr10 4913981 4913982 0 0 Deletion 1 FN1568-S Chr10 9876252 9876254 0 0 Deletion 2 FN1568-S Chr11 13011947 13011955 0 0 Deletion 8 FN1568-S Chr11 17833607 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1568-S Chr11 18949700 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1568-S Chr11 23963378 23963390 0 0 Deletion 12 FN1568-S Chr11 7072743 7072743 0 0 Insertion 1 LOC_Os11g12590 expressed protein FN1568-S Chr11 8194440 8194441 0 0 Deletion 1 FN1568-S Chr12 12051331 12051332 0 0 Deletion 1 FN1568-S Chr12 14980045 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g25830 retrotransposon protein, putative, unclassified, expressed FN1568-S Chr12 21009930 21009931 0 0 Deletion 1 FN1568-S Chr12 4118059 4118060 0 0 Deletion 1 FN1568-S Chr12 5665594 5665594 0 0 Insertion 1 FN1568-S Chr12 7329412 7329413 0 0 Deletion 1 FN1568-S Chr12 8542550 13372020 0 0 Inversion 4829470 LOC_Os12g23590 retrotransposon protein, putative, unclassified FN1568-S Chr2 11041086 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1568-S Chr2 12223511 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1568-S Chr2 14042927 T-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os02g24230 retrotransposon, putative, centromere-specific, expressed FN1568-S Chr2 29687523 29687524 0 0 Deletion 1 FN1568-S Chr2 33766950 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1568-S Chr2 9716265 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1568-S Chr3 10265833 T-A 0 0 Single Base Substitution 0 INTRON HET FN1568-S Chr3 1858419 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1568-S Chr3 22989017 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1568-S Chr3 23513678 23513685 0 0 Deletion 7 FN1568-S Chr3 25747445 A-G 0 0 Single Base Substitution 0 INTRON Homo FN1568-S Chr3 26820029 26820036 0 0 Deletion 7 FN1568-S Chr3 33875862 33875867 0 0 Deletion 5 FN1568-S Chr3 9475940 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1568-S Chr4 17471541 17471550 0 0 Deletion 9 FN1568-S Chr4 7978559 7978560 0 0 Deletion 1 FN1568-S Chr4 8607096 8607096 0 0 Insertion 41 FN1568-S Chr5 10263761 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g17840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1568-S Chr5 14921597 18954040 0 0 Inversion 4032443 LOC_Os05g25660 expressed protein FN1568-S Chr5 14933263 18954034 0 0 Inversion 4020771 FN1568-S Chr5 17503641 17503641 0 0 Insertion 42 FN1568-S Chr5 28229700 28229701 0 0 Deletion 1 FN1568-S Chr6 25885779 25885779 0 0 Insertion 8 FN1568-S Chr6 4532809 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1568-S Chr6 7220499 7220500 0 0 Deletion 1 FN1568-S Chr7 18675147 19334772 0 0 Inversion 659625 FN1568-S Chr7 19774622 19774623 0 0 Deletion 1 FN1568-S Chr7 2356905 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1568-S Chr7 5491073 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g10220 anthocyanidin 3-O-glucosyltransferase, putative, expressed FN1568-S Chr7 8487738 8741108 0 0 Inversion 253370 FN1568-S Chr7 8487751 8602892 0 0 Inversion 115141 FN1568-S Chr7 8768911 A-T 0 0 Single Base Substitution 0 INTRON HET FN1568-S Chr8 11377104 11377109 0 0 Deletion 5 FN1568-S Chr8 14218219 14218236 0 0 Deletion 17 LOC_Os08g23480 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1568-S Chr8 14891261 14891262 0 0 Deletion 1 FN1568-S Chr8 15985283 C-T 0 0 Single Base Substitution 0 INTRON HET FN1568-S Chr8 16141389 C-T 0 0 Single Base Substitution 0 INTRON HET FN1568-S Chr8 16142178 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION Homo FN1568-S Chr8 16866911 16866911 0 0 Insertion 2 FN1568-S Chr8 9614618 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os08g15830 retrotransposon protein, putative, unclassified, expressed FN1568-S Chr9 4239018 G-A 0 0 Single Base Substitution 0 INTRON HET FN1568-S Chr9 5731802 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1568-S Chr9 6658819 6658820 0 0 Deletion 1