FN1572-S Chr1 15980148 15980149 0 0 Deletion 1 FN1572-S Chr1 17317010 C-G 0 0 Single Base Substitution 0 INTRON HET FN1572-S Chr1 18103534 18103538 0 0 Deletion 4 FN1572-S Chr1 22023748 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g39134 EF hand family protein, putative, expressed FN1572-S Chr1 22030801 22030820 0 0 Deletion 19 FN1572-S Chr1 23876354 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1572-S Chr1 24247804 24247823 0 0 Deletion 19 FN1572-S Chr1 26424691 26424691 0 0 Insertion 1 FN1572-S Chr1 34057660 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1572-S Chr1 38220280 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g65810 expressed protein FN1572-S Chr1 5763703 5763703 0 0 Insertion 2 FN1572-S Chr10 15131277 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1572-S Chr10 4011324 4011328 0 0 Deletion 4 FN1572-S Chr10 8419283 8419303 0 0 Deletion 20 FN1572-S Chr10 8966168 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1572-S Chr10 965356 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1572-S Chr11 10378174 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1572-S Chr11 1052674 1052675 0 0 Deletion 1 FN1572-S Chr11 15445916 15445918 0 0 Deletion 2 LOC_Os11g26880 RALFL14 - Rapid ALkalinization Factor RALF family protein precursor, expressed FN1572-S Chr11 16278872 16278874 0 0 Deletion 2 FN1572-S Chr11 20878014 20878014 0 0 Insertion 2 FN1572-S Chr11 23038297 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1572-S Chr11 26802247 26802248 0 0 Deletion 1 LOC_Os11g44340 calmodulin binding protein, putative, expressed FN1572-S Chr11 316664 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1572-S Chr11 3949172 3949173 0 0 Deletion 1 FN1572-S Chr11 7584810 C-G 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN1572-S Chr11 8201250 T-A 0 0 Single Base Substitution 0 INTRON Homo FN1572-S Chr11 9521670 9521670 0 0 Insertion 4 FN1572-S Chr12 14030721 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g24550 expressed protein FN1572-S Chr12 15304766 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1572-S Chr12 21983154 21983154 0 0 Insertion 3 FN1572-S Chr12 25858661 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1572-S Chr12 7670531 7670531 0 0 Insertion 1 FN1572-S Chr2 10344164 10344173 0 0 Deletion 9 FN1572-S Chr2 11781594 11781596 0 0 Deletion 2 LOC_Os02g20010 retrotransposon protein, putative, LINE subclass, expressed FN1572-S Chr2 18460158 18460158 0 0 Insertion 46 FN1572-S Chr2 20373422 20528420 0 0 Inversion 154998 FN1572-S Chr2 20530797 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1572-S Chr2 21450013 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g35690 transcription factor like protein, putative, expressed FN1572-S Chr2 23844830 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1572-S Chr2 31095427 31095429 0 0 Deletion 2 FN1572-S Chr2 3756077 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1572-S Chr2 8384036 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1572-S Chr2 8402922 G-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os02g15070 glutelin, putative, expressed FN1572-S Chr3 14735242 G-A 0 0 Single Base Substitution 0 INTRON HET FN1572-S Chr3 14735244 G-A 0 0 Single Base Substitution 0 INTRON HET FN1572-S Chr3 15930731 15930735 0 0 Deletion 4 FN1572-S Chr3 16351803 16351803 0 0 Insertion 1 FN1572-S Chr3 18983750 18983750 0 0 Insertion 3 FN1572-S Chr3 21887146 21887146 0 0 Insertion 2 FN1572-S Chr3 2459293 2459300 0 0 Deletion 7 FN1572-S Chr3 25164238 25164238 0 0 Insertion 2 FN1572-S Chr3 25218515 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1572-S Chr3 2629229 2629235 0 0 Deletion 6 FN1572-S Chr3 26651621 26651623 0 0 Deletion 2 LOC_Os03g47120 CBS domain containing protein, expressed FN1572-S Chr3 26668444 26909289 0 0 Inversion 240845 FN1572-S Chr3 26668456 26909293 0 0 Inversion 240837 FN1572-S Chr3 2702327 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1572-S Chr3 28059235 28059245 0 0 Deletion 10 FN1572-S Chr3 339564 339565 0 0 Deletion 1 FN1572-S Chr3 35435131 35436273 0 0 Deletion 1142 FN1572-S Chr4 10376462 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1572-S Chr4 10635111 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1572-S Chr4 13856772 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g24210 retrotransposon protein, putative, Ty1-copia subclass FN1572-S Chr4 15051148 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1572-S Chr4 17509994 17509997 0 0 Deletion 3 LOC_Os04g29450 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1572-S Chr4 20610492 20610492 0 0 Insertion 75 LOC_Os04g34030 U-box domain-containing protein, putative, expressed FN1572-S Chr4 22444168 22444177 0 0 Deletion 9 FN1572-S Chr4 22587228 22587228 0 0 Insertion 1 LOC_Os04g37960 synaptonemal complex protein 2, putative, expressed FN1572-S Chr4 2327588 G-C 0 0 Single Base Substitution 0 INTRON HET FN1572-S Chr4 24275655 24275655 0 0 Insertion 2 FN1572-S Chr4 26280502 26280511 0 0 Deletion 9 FN1572-S Chr4 26317313 26317313 0 0 Insertion 1 FN1572-S Chr5 18261001 18301000 0 0 Deletion 40000 LOC_Os05g31400 retrotransposon protein, putative, unclassified, expressed FN1572-S Chr5 18261001 18301000 0 0 Deletion 40000 LOC_Os05g31410 retrotransposon protein, putative, unclassified, expressed FN1572-S Chr5 18261001 18301000 0 0 Deletion 40000 LOC_Os05g31420 GRAS family transcription factor containing protein, expressed FN1572-S Chr5 18261001 18301000 0 0 Deletion 40000 LOC_Os05g31430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1572-S Chr5 18261001 18301000 0 0 Deletion 40000 LOC_Os05g31440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1572-S Chr5 18261001 18301000 0 0 Deletion 40000 LOC_Os05g31450 retrotransposon protein, putative, unclassified FN1572-S Chr5 18261001 18301000 0 0 Deletion 40000 LOC_Os05g31460 transposon protein, putative, unclassified, expressed FN1572-S Chr5 19846466 19846466 0 0 Insertion 1 FN1572-S Chr5 27226910 27226910 0 0 Insertion 71 FN1572-S Chr5 27640846 27640847 0 0 Deletion 1 FN1572-S Chr5 27640847 27640848 0 0 Deletion 1 FN1572-S Chr5 29652448 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1572-S Chr5 4602640 G-T 0 0 Single Base Substitution 0 INTRON HET FN1572-S Chr5 482251 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1572-S Chr5 929372 T-G 0 0 Single Base Substitution 0 INTRON Homo FN1572-S Chr6 18938673 18938673 0 0 Insertion 1 FN1572-S Chr6 26324330 26324332 0 0 Deletion 2 FN1572-S Chr6 3903740 3903741 0 0 Deletion 1 LOC_Os06g08070 transposon protein, putative, unclassified, expressed FN1572-S Chr6 448491 448491 0 0 Insertion 1 FN1572-S Chr7 12237763 12237763 0 0 Insertion 1 FN1572-S Chr7 1405933 1405934 0 0 Deletion 1 LOC_Os07g03520 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1572-S Chr7 23315021 23315021 0 0 Insertion 1 FN1572-S Chr7 5689086 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1572-S Chr8 15056860 15056862 0 0 Deletion 2 FN1572-S Chr8 16567981 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g27110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1572-S Chr9 11963444 11963445 0 0 Deletion 1 FN1572-S Chr9 14737212 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1572-S Chr9 14737227 14737227 0 0 Insertion 1 FN1572-S Chr9 18228192 C-T 0 0 Single Base Substitution 0 INTRON HET