FN1582-S Chr1 20828342 20828354 0 0 Deletion 12 LOC_Os01g37310 SWIM zinc finger family protein, putative, expressed FN1582-S Chr1 24736871 24736875 0 0 Deletion 4 FN1582-S Chr1 2905956 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr1 34682272 34682286 0 0 Deletion 14 FN1582-S Chr1 34685373 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN1582-S Chr1 38991092 38991093 0 0 Deletion 1 LOC_Os01g67180 ribonuclease T2 family domain containing protein, expressed FN1582-S Chr1 39516444 39516444 0 0 Insertion 1 FN1582-S Chr1 41888232 T-C 0 0 Single Base Substitution 0 INTRON Homo FN1582-S Chr1 41911113 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1582-S Chr1 4354515 4354515 0 0 Insertion 20 FN1582-S Chr10 11543084 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr10 15485623 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr10 15607017 C-T 0 0 Single Base Substitution 0 INTRON HET FN1582-S Chr10 16021815 A-C 0 0 Single Base Substitution 0 INTRON HET FN1582-S Chr10 17103332 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g32649 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1582-S Chr10 21404312 21404314 0 0 Deletion 2 FN1582-S Chr10 5714379 5714381 0 0 Deletion 2 LOC_Os10g10400 expressed protein FN1582-S Chr11 11705485 11705494 0 0 Deletion 9 LOC_Os11g20239 expressed protein FN1582-S Chr11 13740768 13740770 0 0 Deletion 2 FN1582-S Chr11 1789739 1789739 0 0 Insertion 18 FN1582-S Chr11 19525863 19525864 0 0 Deletion 1 FN1582-S Chr11 25044555 25044555 0 0 Insertion 4 FN1582-S Chr11 6431256 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr11 6812669 6812707 0 0 Deletion 38 LOC_Os11g12210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1582-S Chr11 7500363 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr11 9674140 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr11 9776742 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1582-S Chr11 9776743 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1582-S Chr12 10454864 10454865 0 0 Deletion 1 FN1582-S Chr12 12892953 12892956 0 0 Deletion 3 LOC_Os12g22839 expressed protein FN1582-S Chr12 1323993 1324002 0 0 Deletion 9 LOC_Os12g03410 expressed protein FN1582-S Chr12 14308950 14308951 0 0 Deletion 1 FN1582-S Chr12 19931456 20147609 0 0 Inversion 216153 LOC_Os12g32992 expressed protein FN1582-S Chr12 19932072 20147619 0 0 Inversion 215547 LOC_Os12g32992 expressed protein FN1582-S Chr12 20130429 C-T 0 0 Single Base Substitution 0 INTRON HET FN1582-S Chr12 20753925 20753926 0 0 Deletion 1 LOC_Os12g34230 expressed protein FN1582-S Chr12 23964397 23964400 0 0 Deletion 3 FN1582-S Chr12 24139232 24139233 0 0 Deletion 1 FN1582-S Chr12 26298022 26298023 0 0 Deletion 1 FN1582-S Chr2 12273509 12273509 0 0 Insertion 1 FN1582-S Chr2 16056395 16056395 0 0 Insertion 14 FN1582-S Chr2 22955336 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr2 33957497 33957501 0 0 Deletion 4 LOC_Os02g55440 transmembrane 9 superfamily member, putative, expressed FN1582-S Chr2 9301574 9374480 0 0 Inversion 72906 LOC_Os02g16430 transposon protein, putative, unclassified, expressed FN1582-S Chr3 16145165 16145165 0 0 Insertion 5 FN1582-S Chr3 17477755 17477792 0 0 Deletion 37 LOC_Os03g30660 expressed protein FN1582-S Chr3 17591944 17591953 0 0 Deletion 9 FN1582-S Chr3 18057435 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr3 20636239 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr3 24779693 24779700 0 0 Deletion 7 FN1582-S Chr3 28680855 28680856 0 0 Deletion 1 FN1582-S Chr3 29610598 29610611 0 0 Deletion 13 FN1582-S Chr3 3182862 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr3 3323518 3323519 0 0 Deletion 1 LOC_Os03g06610 expressed protein FN1582-S Chr3 8662808 8662817 0 0 Deletion 9 LOC_Os03g15700 splicing factor 3A subunit 2, putative, expressed FN1582-S Chr4 13565278 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr4 18237422 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1582-S Chr4 18237428 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1582-S Chr4 23541906 23541909 0 0 Deletion 3 FN1582-S Chr4 24012802 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1582-S Chr4 27569533 27569535 0 0 Deletion 2 FN1582-S Chr4 28592517 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g48050 RING zinc finger protein, putative, expressed FN1582-S Chr4 31255617 A-T 0 0 Single Base Substitution 0 INTRON HET FN1582-S Chr4 33828361 33828362 0 0 Deletion 1 LOC_Os04g56720 RCC2, putative, expressed FN1582-S Chr4 6961001 6996000 0 0 Deletion 35000 LOC_Os04g12580 receptor-like protein kinase, putative, expressed FN1582-S Chr4 6961001 6996000 0 0 Deletion 35000 LOC_Os04g12589 expressed protein FN1582-S Chr4 6961001 6996000 0 0 Deletion 35000 LOC_Os04g12600 receptor-like protein kinase, putative, expressed FN1582-S Chr4 6961001 6996000 0 0 Deletion 35000 LOC_Os04g12610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1582-S Chr4 6961001 6996000 0 0 Deletion 35000 LOC_Os04g12620 expressed protein FN1582-S Chr5 12480 12480 0 0 Insertion 1 FN1582-S Chr5 14674614 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr5 16890864 A-T 0 0 Single Base Substitution 0 INTRON Homo FN1582-S Chr5 17829070 17829071 0 0 Deletion 1 FN1582-S Chr5 1957770 2200396 0 0 Inversion 242626 FN1582-S Chr5 2181843 2200584 0 0 Inversion 18741 LOC_Os05g04640 WRKY5, expressed FN1582-S Chr5 273160 436057 0 0 Inversion 162897 LOC_Os05g01470 methionine S-methyltransferase, putative, expressed FN1582-S Chr5 2919532 2919533 0 0 Deletion 1 FN1582-S Chr5 2945821 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr5 3158444 3158454 0 0 Deletion 10 FN1582-S Chr5 4495621 4495622 0 0 Deletion 1 FN1582-S Chr5 701983 718641 0 0 Deletion 16658 LOC_Os05g02220 ACT domain containing protein, expressed FN1582-S Chr5 701983 718641 0 0 Deletion 16658 LOC_Os05g02230 expressed protein FN1582-S Chr5 701983 718641 0 0 Deletion 16658 LOC_Os05g02240 ATCHX20, putative, expressed FN1582-S Chr5 701983 718641 0 0 Deletion 16658 LOC_Os05g02250 expressed protein FN1582-S Chr6 10823902 10823902 0 0 Insertion 6 FN1582-S Chr6 19962385 19990541 0 0 Tandem-Duplication 28156 LOC_Os06g34320 retrotransposon protein, putative, unclassified, expressed FN1582-S Chr6 19962385 19990541 0 0 Tandem-Duplication 28156 LOC_Os06g34330 expressed protein FN1582-S Chr6 19962385 19990541 0 0 Tandem-Duplication 28156 LOC_Os06g34340 expressed protein FN1582-S Chr6 20108934 20125267 0 0 Deletion 16333 LOC_Os06g34570 retrotransposon protein, putative, unclassified, expressed FN1582-S Chr6 20108934 20125267 0 0 Deletion 16333 LOC_Os06g34580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1582-S Chr6 20108934 20125267 0 0 Deletion 16333 LOC_Os06g34590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1582-S Chr6 20108934 20125267 0 0 Deletion 16333 LOC_Os06g34600 retrotransposon protein, putative, Ty3-gypsy subclass FN1582-S Chr6 20455286 G-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os06g35140 MYB family transcription factor, putative, expressed FN1582-S Chr6 25181895 25181896 0 0 Deletion 1 FN1582-S Chr6 2540280 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1582-S Chr6 27130855 27130855 0 0 Insertion 1 FN1582-S Chr6 2917498 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr6 4163578 G-A 0 0 Single Base Substitution 0 INTRON HET FN1582-S Chr6 8170059 8170059 0 0 Insertion 1 FN1582-S Chr7 12478322 12478324 0 0 Deletion 2 FN1582-S Chr7 15452983 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1582-S Chr7 20874214 20874214 0 0 Insertion 1 FN1582-S Chr7 23767125 G-A 0 0 Single Base Substitution 0 INTRON HET FN1582-S Chr7 24445852 24445854 0 0 Deletion 2 FN1582-S Chr8 14290468 14290477 0 0 Deletion 9 FN1582-S Chr8 151810 151810 0 0 Insertion 2 FN1582-S Chr8 18249104 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1582-S Chr8 2422828 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr8 3989663 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1582-S Chr9 13555217 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET