FN1602-S Chr1 11692734 11692736 0 0 Deletion 2 FN1602-S Chr1 14795471 14795477 0 0 Deletion 6 FN1602-S Chr1 18845021 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1602-S Chr1 24733844 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr1 26482514 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr1 33543520 33543783 0 0 Inversion 263 FN1602-S Chr1 36834561 36834587 0 0 Deletion 26 FN1602-S Chr1 41758090 41758092 0 0 Deletion 2 FN1602-S Chr1 9023509 9023511 0 0 Deletion 2 LOC_Os01g16030 ADP-ribosylation factor, putative, expressed FN1602-S Chr10 20860785 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1602-S Chr10 5617307 A-G 0 0 Single Base Substitution 0 INTRON Homo FN1602-S Chr10 7074441 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1602-S Chr10 9894834 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr11 10188795 10188796 0 0 Deletion 1 FN1602-S Chr11 12580749 Chr8 22301638 0 Translocation 0 FN1602-S Chr11 18576864 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr11 23699280 Chr4 29551823 0 Translocation 0 FN1602-S Chr11 25200701 25200701 0 0 Insertion 1 FN1602-S Chr11 25904717 25904717 0 0 Insertion 2 FN1602-S Chr11 3684651 Chr9 7178701 0 Translocation 0 FN1602-S Chr12 12120466 12120468 0 0 Deletion 2 FN1602-S Chr12 14259175 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g24870 SWIM zinc finger family protein, putative, expressed FN1602-S Chr12 17843383 Chr10 5024981 0 Translocation 0 LOC_Os10g09290 expressed protein FN1602-S Chr12 22400881 22400882 0 0 Deletion 1 FN1602-S Chr12 22453002 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr12 22455917 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr12 22937389 22937395 0 0 Deletion 6 FN1602-S Chr12 25116628 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g40590 helix-loop-helix DNA-binding domain containing protein, expressed FN1602-S Chr12 4109996 4109997 0 0 Deletion 1 FN1602-S Chr12 4391342 4391345 0 0 Deletion 3 FN1602-S Chr2 11916433 11916433 0 0 Insertion 1 FN1602-S Chr2 15356632 15356643 0 0 Deletion 11 FN1602-S Chr2 17593767 Chr1 17520933 0 Translocation 0 LOC_Os01g32000 retrotransposon protein, putative, unclassified, expressed FN1602-S Chr2 17593767 Chr1 17520933 0 Translocation 0 LOC_Os02g29570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1602-S Chr2 18364040 18364052 0 0 Deletion 12 LOC_Os02g30800 POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed FN1602-S Chr2 18371365 18371365 0 0 Insertion 2 FN1602-S Chr2 23639566 23639566 0 0 Insertion 1 FN1602-S Chr2 26676506 26713034 0 0 Inversion 36528 LOC_Os02g44136 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1602-S Chr2 34076018 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1602-S Chr3 14861878 14861880 0 0 Deletion 2 FN1602-S Chr3 17795871 17797730 0 0 Deletion 1859 FN1602-S Chr3 25019319 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr3 28918139 28918141 0 0 Deletion 2 FN1602-S Chr4 11173495 11173495 0 0 Insertion 50 LOC_Os04g20054 retrotransposon protein, putative, unclassified, expressed FN1602-S Chr4 158845 158873 0 0 Deletion 28 FN1602-S Chr4 20012995 20012996 0 0 Deletion 1 FN1602-S Chr4 34357601 34357602 0 0 Deletion 1 FN1602-S Chr4 6134887 6134887 0 0 Insertion 72 FN1602-S Chr4 7535958 7536123 0 0 Inversion 165 LOC_Os04g13510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1602-S Chr5 15568322 15568328 0 0 Deletion 6 FN1602-S Chr5 15651639 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1602-S Chr5 21101749 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr5 2120575 2120626 0 0 Deletion 51 FN1602-S Chr5 21256537 21256545 0 0 Deletion 8 FN1602-S Chr5 235655 C-T 0 0 Single Base Substitution 0 INTRON HET FN1602-S Chr5 29813952 29813952 0 0 Insertion 1 FN1602-S Chr5 7582322 7582323 0 0 Deletion 1 FN1602-S Chr5 8561659 8561721 0 0 Deletion 62 LOC_Os05g15070 ligA, putative, expressed FN1602-S Chr6 31137929 31137933 0 0 Deletion 4 FN1602-S Chr6 5681640 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN1602-S Chr6 5913473 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g11280 12-oxophytodienoate reductase, putative, expressed FN1602-S Chr6 6351935 6351951 0 0 Deletion 16 LOC_Os06g11920 endonuclease/exonuclease/phosphatase family domain containing protein, expressed FN1602-S Chr7 16487925 16521720 0 0 Inversion 33795 LOC_Os07g28230 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1602-S Chr7 16487925 16521720 0 0 Inversion 33795 LOC_Os07g28260 expressed protein FN1602-S Chr7 16776463 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr7 17210582 17210616 0 0 Deletion 34 FN1602-S Chr7 18427700 18427704 0 0 Deletion 4 FN1602-S Chr7 21194732 Chr3 17797725 0 Translocation 0 LOC_Os07g35440 retrotransposon protein, putative, unclassified FN1602-S Chr7 25655275 25655282 0 0 Deletion 7 FN1602-S Chr7 2573181 2573181 0 0 Insertion 31 FN1602-S Chr7 4959596 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1602-S Chr7 4959597 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g09400 RNA ligase isoform 1, putative, expressed FN1602-S Chr7 4959598 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g09400 RNA ligase isoform 1, putative, expressed FN1602-S Chr8 10015254 10015255 0 0 Deletion 1 FN1602-S Chr8 12372464 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr8 1785015 C-T 0 0 Single Base Substitution 0 INTRON HET FN1602-S Chr8 19566291 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr8 2173213 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr8 22997370 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g36440 HVA22, putative, expressed FN1602-S Chr8 22997371 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1602-S Chr9 15703674 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1602-S Chr9 16282318 16282319 0 0 Deletion 1 FN1602-S Chr9 22245374 22245379 0 0 Deletion 5 FN1602-S Chr9 679459 679481 0 0 Deletion 22 FN1602-S Chr9 8909530 8909534 0 0 Deletion 4 FN1602-S Chr9 8981681 8981681 0 0 Insertion 3