FN1617-S Chr1 13673150 13673196 0 0 Deletion 46 FN1617-S Chr1 15227828 15227829 0 0 Deletion 1 FN1617-S Chr1 15807036 15807041 0 0 Deletion 5 FN1617-S Chr1 23960258 23960258 0 0 Insertion 6 LOC_Os01g42270 transcriptional corepressor LEUNIG, putative, expressed FN1617-S Chr1 26244124 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr1 29323403 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1617-S Chr1 29615782 29615782 0 0 Insertion 16 FN1617-S Chr1 34587426 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1617-S Chr1 37279013 37279029 0 0 Deletion 16 LOC_Os01g64190 expressed protein FN1617-S Chr1 41827538 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr1 5223729 5223729 0 0 Insertion 1 FN1617-S Chr1 7486635 7486636 0 0 Deletion 1 FN1617-S Chr10 13123027 13123031 0 0 Deletion 4 FN1617-S Chr10 15057021 Chr3 14226468 0 Translocation 0 FN1617-S Chr10 15057823 Chr3 14316455 0 Translocation 0 LOC_Os03g25070 CAMK_CAMK_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN1617-S Chr10 22174105 22174110 0 0 Deletion 5 FN1617-S Chr10 6182237 6182237 0 0 Insertion 1 FN1617-S Chr10 7629684 7629684 0 0 Insertion 4 FN1617-S Chr11 11492226 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1617-S Chr11 14318408 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1617-S Chr11 16606113 16606122 0 0 Deletion 9 FN1617-S Chr11 23000969 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1617-S Chr11 23000970 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1617-S Chr11 5281345 Chr7 5459882 0 Translocation 0 FN1617-S Chr12 16756382 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g28330 retrotransposon protein, putative, unclassified, expressed FN1617-S Chr12 21252615 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr12 24348928 24348928 0 0 Insertion 1 FN1617-S Chr12 26252926 26252945 0 0 Deletion 19 FN1617-S Chr12 4000534 4007515 0 0 Deletion 6981 LOC_Os12g07890 expressed protein FN1617-S Chr12 4000534 4007515 0 0 Deletion 6981 LOC_Os12g07900 expressed protein FN1617-S Chr12 4238928 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr12 9640589 9640590 0 0 Deletion 1 FN1617-S Chr2 11913615 11913616 0 0 Deletion 1 FN1617-S Chr2 1864451 1864451 0 0 Insertion 1 LOC_Os02g04240 wee1-like protein kinase, putative, expressed FN1617-S Chr2 21090153 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1617-S Chr2 27197808 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr2 27241890 27241891 0 0 Deletion 1 LOC_Os02g44975 expressed protein FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g24950 expressed protein FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g24960 ulp1 protease family, C-terminal catalytic domain containing protein, expressed FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g24970 SWIM zinc finger family protein, putative FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g24980 SWIM zinc finger family protein, putative FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g24990 ulp1 protease family, C-terminal catalytic domain containing protein FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g25000 GDSL-like lipase/acylhydrolase, putative, expressed FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g25010 GDSL-like lipase/acylhydrolase, putative, expressed FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g25020 expressed protein FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g25030 GDSL-like lipase/acylhydrolase, putative, expressed FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g25040 GDSL-like lipase/acylhydrolase, putative, expressed FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g25050 chaperonin, putative, expressed FN1617-S Chr3 14226001 14316000 0 0 Deletion 90000 LOC_Os03g25060 expressed protein FN1617-S Chr3 14336058 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr3 16105416 C-T 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os03g28020 retrotransposon protein, putative, unclassified, expressed FN1617-S Chr3 18101646 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr3 19009001 19009013 0 0 Deletion 12 FN1617-S Chr3 2214559 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr3 24230687 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1617-S Chr3 28442153 28442154 0 0 Deletion 1 FN1617-S Chr3 33683797 C-G 0 0 Single Base Substitution 0 INTRON HET FN1617-S Chr3 4421687 4421688 0 0 Deletion 1 FN1617-S Chr4 10889671 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1617-S Chr4 14006466 14006468 0 0 Deletion 2 FN1617-S Chr4 17197780 17197782 0 0 Deletion 2 FN1617-S Chr4 2372159 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g04914 retrotransposon protein, putative, unclassified, expressed FN1617-S Chr4 23739020 Chr3 6420341 0 Translocation 0 LOC_Os03g12230 caleosin related protein, putative, expressed FN1617-S Chr4 23739020 Chr3 6420341 0 Translocation 0 LOC_Os04g39864 Os4bglu11 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed FN1617-S Chr4 23739026 Chr3 6412010 0 Translocation 0 LOC_Os04g39864 Os4bglu11 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed FN1617-S Chr4 23739206 A-C 0 0 Single Base Substitution 0 INTRON HET FN1617-S Chr4 32903332 32903332 0 0 Insertion 1 FN1617-S Chr4 6460453 6460454 0 0 Deletion 1 FN1617-S Chr4 9014862 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr5 12017251 12017251 0 0 Insertion 21 FN1617-S Chr5 21963316 21963321 0 0 Deletion 5 FN1617-S Chr5 22922439 22923060 0 0 Deletion 621 FN1617-S Chr5 2699176 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr5 27610245 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g48170 retrotransposon protein, putative, unclassified, expressed FN1617-S Chr5 27770559 27770566 0 0 Deletion 7 FN1617-S Chr5 28116512 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1617-S Chr5 3492547 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr6 11834017 29552990 0 0 Inversion 17718973 FN1617-S Chr6 13653659 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr6 17913709 17913710 0 0 Deletion 1 FN1617-S Chr6 5201317 5201317 0 0 Insertion 2 FN1617-S Chr6 5767785 5767785 0 0 Insertion 14 FN1617-S Chr6 5806532 5806557 0 0 Deletion 25 FN1617-S Chr6 8338915 8338918 0 0 Deletion 3 FN1617-S Chr7 10574466 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr7 19341461 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr7 20518301 20518350 0 0 Deletion 49 FN1617-S Chr7 24405229 C-G 0 0 Single Base Substitution 0 INTRON HET FN1617-S Chr7 29495747 29495748 0 0 Deletion 1 FN1617-S Chr7 29495753 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr7 4124573 4124573 0 0 Insertion 2 FN1617-S Chr7 6795312 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g12140 PPR repeat domain containing protein, putative, expressed FN1617-S Chr7 7797921 7797922 0 0 Deletion 1 FN1617-S Chr8 14026605 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g23230 expressed protein FN1617-S Chr8 5683258 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr8 750802 750804 0 0 Deletion 2 LOC_Os08g02204 expressed protein FN1617-S Chr9 11057437 11057437 0 0 Insertion 29 FN1617-S Chr9 11234113 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr9 14643606 Chr7 2367382 0 Translocation 0 FN1617-S Chr9 1992724 C-T 0 0 Single Base Substitution 0 INTRON HET FN1617-S Chr9 20848685 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr9 22892231 22892232 0 0 Deletion 1 FN1617-S Chr9 3455563 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1617-S Chr9 5000671 C-T 0 0 Single Base Substitution 0 INTERGENIC HET