FN1634-S Chr1 11019110 11019118 0 0 Deletion 8 FN1634-S Chr1 12885196 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g22920 gibberellin 2-beta-dioxygenase, putative, expressed FN1634-S Chr1 12885197 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g22920 gibberellin 2-beta-dioxygenase, putative, expressed FN1634-S Chr1 19739872 19739881 0 0 Deletion 9 FN1634-S Chr1 19851610 19851611 0 0 Deletion 1 FN1634-S Chr1 32783665 G-A 0 0 Single Base Substitution 0 START_GAINED HET LOC_Os01g56800 MATH domain containing protein, expressed FN1634-S Chr1 34856725 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr1 36757344 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g63444 expressed protein FN1634-S Chr1 42913055 42913055 0 0 Insertion 1 FN1634-S Chr1 42914797 42914800 0 0 Deletion 3 FN1634-S Chr1 8434486 8434486 0 0 Insertion 62 FN1634-S Chr10 14322278 14626660 0 0 Inversion 304382 LOC_Os10g27170 calmodulin-binding protein, putative, expressed FN1634-S Chr10 14322317 14626669 0 0 Inversion 304352 LOC_Os10g27170 calmodulin-binding protein, putative, expressed FN1634-S Chr10 14827428 14827439 0 0 Deletion 11 FN1634-S Chr10 15329998 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1634-S Chr10 15906249 15906255 0 0 Deletion 6 FN1634-S Chr10 15906346 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr10 15906347 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr10 16419872 16419884 0 0 Deletion 12 FN1634-S Chr10 7497182 7497182 0 0 Insertion 2 FN1634-S Chr11 16315983 16315985 0 0 Deletion 2 FN1634-S Chr11 16678289 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr11 17399199 17877199 0 0 Inversion 478000 FN1634-S Chr11 2204136 2204150 0 0 Deletion 14 FN1634-S Chr11 24348487 24348500 0 0 Deletion 13 FN1634-S Chr11 25833282 25833284 0 0 Deletion 2 FN1634-S Chr11 3168493 3168493 0 0 Insertion 18 FN1634-S Chr11 4878367 4878367 0 0 Insertion 2 FN1634-S Chr11 649603 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr12 1249658 1249661 0 0 Deletion 3 FN1634-S Chr12 13229311 13229327 0 0 Deletion 16 FN1634-S Chr12 9729905 9729905 0 0 Insertion 2 FN1634-S Chr2 12213236 12213237 0 0 Deletion 1 FN1634-S Chr2 17756787 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr2 23649329 23649329 0 0 Insertion 28 FN1634-S Chr2 27390355 27390356 0 0 Deletion 1 FN1634-S Chr2 27667797 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr2 29161015 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g47690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1634-S Chr2 33789179 T-A 0 0 Single Base Substitution 0 INTRON HET FN1634-S Chr2 4252267 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr2 9443849 9443850 0 0 Deletion 1 FN1634-S Chr3 1576025 1576038 0 0 Deletion 13 FN1634-S Chr3 16289691 16289691 0 0 Insertion 2 FN1634-S Chr3 16854817 16854817 0 0 Insertion 2 FN1634-S Chr3 1714089 3566935 0 0 Tandem-Duplication 1852846 FN1634-S Chr3 17224898 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr3 1734737 1743739 0 0 Deletion 9002 LOC_Os03g03860 expressed protein FN1634-S Chr3 17762343 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr3 18369894 18369894 0 0 Insertion 77 FN1634-S Chr3 1844126 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g04040 expressed protein FN1634-S Chr3 24449554 24449555 0 0 Deletion 1 LOC_Os03g43720 transporter family protein, putative, expressed FN1634-S Chr3 25392671 25392671 0 0 Insertion 1 FN1634-S Chr3 26522806 26522808 0 0 Deletion 2 FN1634-S Chr3 28517266 28517296 0 0 Deletion 30 FN1634-S Chr3 3524178 Chr1 629528 0 Translocation 0 FN1634-S Chr3 3527694 Chr1 629486 0 Translocation 0 LOC_Os03g06940 beta-galactosidase, putative, expressed FN1634-S Chr3 3560627 3566984 0 0 Deletion 6357 LOC_Os03g06980 nucleic acid binding protein, putative, expressed FN1634-S Chr3 3560627 3566984 0 0 Deletion 6357 LOC_Os03g06990 oxidoreductase, putative, expressed FN1634-S Chr3 6050504 6057752 0 0 Deletion 7248 LOC_Os03g11614 OsMADS1 - MADS-box family gene with MIKCc type-box, expressed FN1634-S Chr3 6050513 Chr2 1675802 0 Translocation 0 LOC_Os02g03940 expressed protein FN1634-S Chr3 6057732 Chr2 1675808 0 Translocation 0 LOC_Os02g03940 expressed protein FN1634-S Chr3 6057732 Chr2 1675808 0 Translocation 0 LOC_Os03g11614 OsMADS1 - MADS-box family gene with MIKCc type-box, expressed FN1634-S Chr3 9295058 9295062 0 0 Deletion 4 LOC_Os03g16770 hypothetical protein FN1634-S Chr4 13598829 13598831 0 0 Deletion 2 FN1634-S Chr4 14515072 14515073 0 0 Deletion 1 FN1634-S Chr4 1836036 T-A 0 0 Single Base Substitution 0 INTRON HET FN1634-S Chr4 18779650 18779650 0 0 Insertion 9 LOC_Os04g31400 expressed protein FN1634-S Chr4 22080967 22080973 0 0 Deletion 6 FN1634-S Chr4 22308947 Chr3 1734738 0 Translocation 0 LOC_Os04g37430 lipoxygenase protein, putative, expressed FN1634-S Chr4 23295106 Chr3 1743776 0 Translocation 0 LOC_Os04g39170 expressed protein FN1634-S Chr4 26610764 26610764 0 0 Insertion 1 FN1634-S Chr4 30028690 30028690 0 0 Insertion 4 FN1634-S Chr4 35212755 35212766 0 0 Deletion 11 FN1634-S Chr4 4774335 4774341 0 0 Deletion 6 FN1634-S Chr4 5384199 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr4 5920782 G-A 0 0 Single Base Substitution 0 INTRON HET FN1634-S Chr4 6345537 G-A 0 0 Single Base Substitution 0 INTRON HET FN1634-S Chr4 8439565 8439566 0 0 Deletion 1 FN1634-S Chr4 9469462 9469462 0 0 Insertion 1 FN1634-S Chr5 11988951 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g20430 retrotransposon protein, putative, unclassified, expressed FN1634-S Chr5 16603496 16603496 0 0 Insertion 18 FN1634-S Chr5 18978342 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1634-S Chr5 19472537 G-C 0 0 Single Base Substitution 0 INTRON Homo FN1634-S Chr5 23542626 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1634-S Chr5 26631103 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1634-S Chr5 29348402 29348402 0 0 Insertion 1 LOC_Os05g51160 Myb transcription factor, putative, expressed FN1634-S Chr5 7208984 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g12560 expressed protein FN1634-S Chr5 8950485 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr6 10472670 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr6 17335844 17335850 0 0 Deletion 6 FN1634-S Chr6 17499979 17499982 0 0 Deletion 3 FN1634-S Chr6 19227474 19227479 0 0 Deletion 5 LOC_Os06g33030 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1634-S Chr6 19505216 19505216 0 0 Insertion 1 FN1634-S Chr6 23037107 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr6 26612108 26612108 0 0 Insertion 24 FN1634-S Chr6 26943244 26943244 0 0 Insertion 1 LOC_Os06g44620 AMP-binding domain containing protein, expressed FN1634-S Chr6 2804514 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN1634-S Chr6 28435598 T-C 0 0 Single Base Substitution 0 INTRON HET FN1634-S Chr6 29709042 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1634-S Chr6 53848 53850 0 0 Deletion 2 FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03279 SCP-like extracellular protein, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03297 retrotransposon protein, putative, unclassified, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03310 transposon protein, putative, unclassified, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03319 SCP-like extracellular protein, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03328 phototropin, putative, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03337 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03350 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03368 SCP-like extracellular protein, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03377 SCP-like extracellular protein, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03390 retrotransposon protein, putative, unclassified, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03409 SCP-like extracellular protein, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03418 phototropin, putative, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03427 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03440 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03449 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03458 SCP-like extracellular protein, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03467 SCP-like extracellular protein, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03476 retrotransposon protein, putative, unclassified, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03490 transposon protein, putative, unclassified, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03499 SCP-like extracellular protein, expressed FN1634-S Chr7 1319001 1411000 0 0 Deletion 92000 LOC_Os07g03520 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1634-S Chr7 14210902 Chr1 10896698 0 Translocation 0 LOC_Os01g19270 expressed protein FN1634-S Chr7 14340894 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr7 3048001 3105000 0 0 Deletion 57000 LOC_Os07g06262 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1634-S Chr7 3048001 3105000 0 0 Deletion 57000 LOC_Os07g06274 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1634-S Chr7 3048001 3105000 0 0 Deletion 57000 LOC_Os07g06300 ethylene-insensitive protein 2, putative, expressed FN1634-S Chr7 3048001 3105000 0 0 Deletion 57000 LOC_Os07g06315 expressed protein FN1634-S Chr7 3048001 3105000 0 0 Deletion 57000 LOC_Os07g06325 retrotransposon protein, putative, unclassified FN1634-S Chr7 3048001 3105000 0 0 Deletion 57000 LOC_Os07g06335 hypothetical protein FN1634-S Chr7 3048001 3105000 0 0 Deletion 57000 LOC_Os07g06345 expressed protein FN1634-S Chr7 3048001 3105000 0 0 Deletion 57000 LOC_Os07g06355 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1634-S Chr7 3048001 3105000 0 0 Deletion 57000 LOC_Os07g06380 peroxidase precursor, putative, expressed FN1634-S Chr7 4771348 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr7 8457698 8457698 0 0 Insertion 12 FN1634-S Chr8 10751531 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr8 12285357 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1634-S Chr8 12666498 12666513 0 0 Deletion 15 FN1634-S Chr8 15048170 15048171 0 0 Deletion 1 FN1634-S Chr8 23108300 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr8 25696213 T-A 0 0 Single Base Substitution 0 INTRON HET FN1634-S Chr8 5180813 5189460 0 0 Deletion 8647 LOC_Os08g08910 hypothetical protein FN1634-S Chr8 5180813 5189460 0 0 Deletion 8647 LOC_Os08g08920 Cupin domain containing protein, expressed FN1634-S Chr8 5180827 Chr7 14210904 0 Translocation 0 LOC_Os08g08910 hypothetical protein FN1634-S Chr8 5189457 Chr1 10897036 0 Translocation 0 LOC_Os01g19270 expressed protein FN1634-S Chr8 5189504 Chr7 14210903 0 Translocation 0 FN1634-S Chr8 5312461 5312463 0 0 Deletion 2 LOC_Os08g09160 retrotransposon protein, putative, unclassified, expressed FN1634-S Chr8 536100 536101 0 0 Deletion 1 FN1634-S Chr9 2890704 T-C 0 0 Single Base Substitution 0 INTRON HET FN1634-S Chr9 3764679 3764691 0 0 Deletion 12 FN1634-S Chr9 4011896 4011898 0 0 Deletion 2 LOC_Os09g07890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1634-S Chr9 4772102 4772103 0 0 Deletion 1 FN1634-S Chr9 5973566 5973567 0 0 Deletion 1 LOC_Os09g10890 retrotransposon protein, putative, unclassified, expressed FN1634-S Chr9 8107003 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1634-S Chr9 8510921 T-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET