FN1650-S Chr1 10092188 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1650-S Chr1 18736798 C-A 0 0 Single Base Substitution 0 INTRON Homo FN1650-S Chr1 20143596 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1650-S Chr1 20813836 20813838 0 0 Deletion 2 LOC_Os01g37270 retrotransposon protein, putative, unclassified FN1650-S Chr1 26252860 T-C 0 0 Single Base Substitution 0 INTRON HET FN1650-S Chr1 28470221 C-T 0 0 Single Base Substitution 0 INTRON HET FN1650-S Chr1 29195750 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr1 3512294 A-G 0 0 Single Base Substitution 0 INTRON HET FN1650-S Chr1 40578244 40578247 0 0 Deletion 3 FN1650-S Chr1 42866990 42866993 0 0 Deletion 3 FN1650-S Chr10 11429651 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g22130 retrotransposon protein, putative, unclassified, expressed FN1650-S Chr10 21747312 21747313 0 0 Deletion 1 FN1650-S Chr10 4961285 Chr7 3359558 0 Translocation 0 FN1650-S Chr10 5074124 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g09400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1650-S Chr10 7349824 7349834 0 0 Deletion 10 FN1650-S Chr10 8411526 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr11 12088883 12115598 0 0 Deletion 26715 FN1650-S Chr11 13614688 Chr4 15843 0 Translocation 0 FN1650-S Chr11 1919887 19701008 0 0 Inversion 17781121 FN1650-S Chr11 2138983 2138990 0 0 Deletion 7 FN1650-S Chr11 25992001 26028000 0 0 Deletion 36000 LOC_Os11g43090 retrotransposon protein, putative, Ty3-gypsy subclass FN1650-S Chr11 25992001 26028000 0 0 Deletion 36000 LOC_Os11g43100 retrotransposon protein, putative, Ty3-gypsy subclass FN1650-S Chr11 25992001 26028000 0 0 Deletion 36000 LOC_Os11g43110 transposon protein, putative, CACTA, En/Spm sub-class FN1650-S Chr11 25992001 26028000 0 0 Deletion 36000 LOC_Os11g43120 transposon protein, putative, CACTA, En/Spm sub-class FN1650-S Chr11 25992001 26028000 0 0 Deletion 36000 LOC_Os11g43130 retrotransposon protein, putative, unclassified FN1650-S Chr11 25992001 26028000 0 0 Deletion 36000 LOC_Os11g43140 expressed protein FN1650-S Chr11 2809592 2809623 0 0 Deletion 31 FN1650-S Chr11 28452495 Chr4 22510681 0 Translocation 0 LOC_Os11g47310 receptor kinase-like protein, identical, putative, expressed FN1650-S Chr11 4131781 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1650-S Chr11 5070069 Chr10 7556024 0 Translocation 0 FN1650-S Chr11 6919815 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1650-S Chr11 7588458 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1650-S Chr12 15708415 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1650-S Chr12 15711844 15711846 0 0 Deletion 2 LOC_Os12g26820 retrotransposon protein, putative, unclassified FN1650-S Chr12 24522921 24522926 0 0 Deletion 5 FN1650-S Chr2 14519816 14519824 0 0 Deletion 8 LOC_Os02g25040 retrotransposon protein, putative, unclassified, expressed FN1650-S Chr2 16283558 16283569 0 0 Deletion 11 LOC_Os02g27510 transposon protein, putative, unclassified, expressed FN1650-S Chr2 18534196 18534196 0 0 Insertion 2 FN1650-S Chr2 20510035 20510038 0 0 Deletion 3 FN1650-S Chr2 27684006 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1650-S Chr2 28612817 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr2 29515176 29515181 0 0 Deletion 5 FN1650-S Chr2 30949176 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr2 33018962 33018962 0 0 Insertion 2 FN1650-S Chr2 33671974 33672020 0 0 Deletion 46 FN1650-S Chr2 35771204 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g58500 phospholipase A2, putative, expressed FN1650-S Chr2 35771205 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1650-S Chr2 4869246 4869247 0 0 Deletion 1 LOC_Os02g09480 myb-like DNA-binding domain containing protein, putative, expressed FN1650-S Chr3 12419285 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1650-S Chr3 13559330 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1650-S Chr3 17032675 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g29900 transposon protein, putative, unclassified, expressed FN1650-S Chr3 19866781 A-T 0 0 Single Base Substitution 0 START_GAINED HET LOC_Os03g35849 expressed protein FN1650-S Chr3 20120884 20120884 0 0 Insertion 2 LOC_Os03g36270 retrotransposon protein, putative, unclassified, expressed FN1650-S Chr3 23492601 C-G 0 0 Single Base Substitution 0 UTR_5_PRIME Homo FN1650-S Chr3 25693159 25693159 0 0 Insertion 2 FN1650-S Chr3 27907261 G-A 0 0 Single Base Substitution 0 INTRON HET FN1650-S Chr3 30293103 30293106 0 0 Deletion 3 LOC_Os03g52830 FATC domain containing protein, expressed FN1650-S Chr3 34227901 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g60180 GTPase of unknown function domain containing protein, putative, expressed FN1650-S Chr3 35653844 35653847 0 0 Deletion 3 FN1650-S Chr3 36371977 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr3 365270 365270 0 0 Insertion 1 FN1650-S Chr4 15111427 15111428 0 0 Deletion 1 FN1650-S Chr4 15582141 15582151 0 0 Deletion 10 FN1650-S Chr4 15744792 15744802 0 0 Deletion 10 FN1650-S Chr4 23765167 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN1650-S Chr4 24198643 24198652 0 0 Deletion 9 FN1650-S Chr4 30148952 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr4 31713913 31713913 0 0 Insertion 3 FN1650-S Chr5 10314538 10314539 0 0 Deletion 1 FN1650-S Chr5 11210714 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr5 16735054 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr5 1828370 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1650-S Chr5 22900574 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g39040 retrotransposon protein, putative, unclassified, expressed FN1650-S Chr5 29687009 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr5 3412152 3412157 0 0 Deletion 5 LOC_Os05g06610 retrotransposon protein, putative, unclassified, expressed FN1650-S Chr5 8121865 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr5 8121867 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr6 12654310 12654311 0 0 Deletion 1 FN1650-S Chr6 13827061 Chr3 31363407 0 Translocation 0 FN1650-S Chr6 17319242 17319244 0 0 Deletion 2 FN1650-S Chr6 2546873 C-A 0 0 Single Base Substitution 0 UTR_5_PRIME Homo FN1650-S Chr6 25556332 25556334 0 0 Deletion 2 FN1650-S Chr6 4437310 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g08850 cyclic nucleotide-gated ion channel 14, putative, expressed FN1650-S Chr6 4920979 4920982 0 0 Deletion 3 FN1650-S Chr6 9910664 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1650-S Chr7 15155308 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1650-S Chr7 20923497 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1650-S Chr7 22131048 22131048 0 0 Insertion 5 FN1650-S Chr7 3988063 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr7 8020454 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g14060 retrotransposon protein, putative, unclassified, expressed FN1650-S Chr8 10991578 Chr3 15245749 0 Translocation 0 LOC_Os03g26704 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1650-S Chr8 10991578 Chr3 15245749 0 Translocation 0 LOC_Os08g17910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1650-S Chr8 11382016 11382017 0 0 Deletion 1 FN1650-S Chr8 13524985 T-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1650-S Chr8 14237743 14237746 0 0 Deletion 3 LOC_Os08g23510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1650-S Chr8 20001320 C-T 0 0 Single Base Substitution 0 INTRON HET FN1650-S Chr8 20947546 20947557 0 0 Deletion 11 FN1650-S Chr8 21320636 21320636 0 0 Insertion 50 FN1650-S Chr8 2621877 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr8 5085662 5085665 0 0 Deletion 3 LOC_Os08g08770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1650-S Chr8 555817 555829 0 0 Deletion 12 LOC_Os08g01900 armadillo/beta-catenin repeat family protein, putative, expressed FN1650-S Chr8 6428079 6428084 0 0 Deletion 5 LOC_Os08g10900 retrotransposon protein, putative, Ty3-gypsy subclass FN1650-S Chr8 8336123 8336123 0 0 Insertion 2 FN1650-S Chr9 10524645 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr9 13151096 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1650-S Chr9 19514508 19514508 0 0 Insertion 1 FN1650-S Chr9 4334476 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr9 7843117 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1650-S Chr9 790815 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g02110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed