FN1656-S Chr1 24433294 A-C 0 0 Single Base Substitution 0 INTRON HET FN1656-S Chr1 32100690 32100690 0 0 Insertion 2 FN1656-S Chr1 37862461 37862465 0 0 Deletion 4 FN1656-S Chr1 786478 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1656-S Chr1 8536920 8536923 0 0 Deletion 3 LOC_Os01g15250 expressed protein FN1656-S Chr10 1251520 T-C 0 0 Single Base Substitution 0 INTRON HET FN1656-S Chr10 15427342 15427352 0 0 Deletion 10 LOC_Os10g29660 TATA-binding protein, putative, expressed FN1656-S Chr10 18607453 18607454 0 0 Deletion 1 FN1656-S Chr10 19859685 Chr1 7956326 0 Translocation 0 LOC_Os01g14200 retrotransposon protein, putative, unclassified, expressed FN1656-S Chr10 19859685 Chr1 7956326 0 Translocation 0 LOC_Os10g37110 transposon protein, putative, unclassified, expressed FN1656-S Chr10 2320531 2330130 0 0 Deletion 9599 LOC_Os10g04810 retrotransposon protein, putative, Ty3-gypsy subclass FN1656-S Chr10 264628 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1656-S Chr11 12007871 Chr7 12281530 0 Translocation 0 FN1656-S Chr11 1685396 1685405 0 0 Deletion 9 FN1656-S Chr11 2087750 2087750 0 0 Insertion 19 FN1656-S Chr11 23608179 23608180 0 0 Deletion 1 FN1656-S Chr11 24750230 24750230 0 0 Insertion 1 FN1656-S Chr11 25331003 Chr2 2430966 0 Translocation 0 FN1656-S Chr11 27797888 Chr5 23590066 0 Translocation 0 LOC_Os05g40160 NB-ARC domain containing protein, expressed FN1656-S Chr11 3833574 3833576 0 0 Deletion 2 FN1656-S Chr11 658820 658831 0 0 Deletion 11 LOC_Os11g02300 CPuORF36 - conserved peptide uORF-containing transcript, expressed FN1656-S Chr12 10411675 10411676 0 0 Deletion 1 FN1656-S Chr12 1307178 1307179 0 0 Deletion 1 FN1656-S Chr12 13357022 Chr8 626798 0 Translocation 0 FN1656-S Chr12 21283337 21283337 0 0 Insertion 1 FN1656-S Chr12 27291929 27291930 0 0 Deletion 1 FN1656-S Chr12 5829886 Chr1 11618352 0 Translocation 0 LOC_Os01g20840 lipase class 3 family protein, putative, expressed FN1656-S Chr12 7965012 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1656-S Chr2 10185657 10185669 0 0 Deletion 12 FN1656-S Chr2 16204891 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1656-S Chr2 16204892 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1656-S Chr2 16996836 16996836 0 0 Insertion 41 FN1656-S Chr2 19518317 19518331 0 0 Deletion 14 FN1656-S Chr2 29401125 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g48030 expressed protein FN1656-S Chr3 11963307 G-A 0 0 Single Base Substitution 0 INTRON Homo FN1656-S Chr3 11963308 T-A 0 0 Single Base Substitution 0 INTRON Homo FN1656-S Chr3 19875001 19917000 0 0 Deletion 42000 LOC_Os03g35860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1656-S Chr3 19875001 19917000 0 0 Deletion 42000 LOC_Os03g35870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1656-S Chr3 19875001 19917000 0 0 Deletion 42000 LOC_Os03g35880 expressed protein FN1656-S Chr3 19875001 19917000 0 0 Deletion 42000 LOC_Os03g35886 expressed protein FN1656-S Chr3 19875001 19917000 0 0 Deletion 42000 LOC_Os03g35894 retrotransposon, putative, centromere-specific, expressed FN1656-S Chr3 2137997 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1656-S Chr3 36350257 36350260 0 0 Deletion 3 LOC_Os03g64320 expressed protein FN1656-S Chr3 4735987 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1656-S Chr3 4802736 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1656-S Chr3 5511437 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g10780 flap endonuclease, putative, expressed FN1656-S Chr3 8571484 8571498 0 0 Deletion 14 LOC_Os03g15560 wibg, putative, expressed FN1656-S Chr3 9414817 9414820 0 0 Deletion 3 FN1656-S Chr4 12880107 13665754 0 0 Inversion 785647 LOC_Os04g22720 expressed protein FN1656-S Chr4 12880120 13665752 0 0 Inversion 785632 LOC_Os04g22720 expressed protein FN1656-S Chr4 14248770 14248773 0 0 Deletion 3 FN1656-S Chr4 16131940 16131944 0 0 Deletion 4 FN1656-S Chr4 17102396 17102397 0 0 Deletion 1 FN1656-S Chr4 24923572 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1656-S Chr4 27791301 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1656-S Chr4 27818116 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1656-S Chr4 283620 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g01400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1656-S Chr4 30657067 30657070 0 0 Deletion 3 FN1656-S Chr4 5104950 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1656-S Chr4 6237038 6237079 0 0 Deletion 41 FN1656-S Chr4 7198004 7198005 0 0 Deletion 1 FN1656-S Chr4 8448669 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1656-S Chr5 1911547 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1656-S Chr5 21705756 28051528 0 0 Inversion 6345772 LOC_Os05g37140 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed FN1656-S Chr5 21706557 22207511 0 0 Inversion 500954 LOC_Os05g37140 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed FN1656-S Chr5 2217585 2217589 0 0 Deletion 4 LOC_Os05g04690 CHIT11 - Chitinase family protein precursor, expressed FN1656-S Chr5 24397905 G-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os05g41700 retrotransposon protein, putative, unclassified, expressed FN1656-S Chr6 1138629 1138630 0 0 Deletion 1 LOC_Os06g03080 aspartic protease, putative, expressed FN1656-S Chr6 28839041 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1656-S Chr7 13619588 14224617 0 0 Inversion 605029 FN1656-S Chr7 13619621 14224697 0 0 Inversion 605076 FN1656-S Chr7 5214494 5214511 0 0 Deletion 17 FN1656-S Chr7 5707452 5707453 0 0 Deletion 1 LOC_Os07g10550 cyclin-related protein, putative, expressed FN1656-S Chr8 14201794 14201803 0 0 Deletion 9 FN1656-S Chr8 14790001 14875000 0 0 Deletion 85000 LOC_Os08g24490 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1656-S Chr8 14790001 14875000 0 0 Deletion 85000 LOC_Os08g24500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1656-S Chr8 14790001 14875000 0 0 Deletion 85000 LOC_Os08g24510 hypothetical protein FN1656-S Chr8 14790001 14875000 0 0 Deletion 85000 LOC_Os08g24520 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1656-S Chr8 14790001 14875000 0 0 Deletion 85000 LOC_Os08g24530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1656-S Chr8 14790001 14875000 0 0 Deletion 85000 LOC_Os08g24540 retrotransposon protein, putative, unclassified FN1656-S Chr8 14790001 14875000 0 0 Deletion 85000 LOC_Os08g24550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1656-S Chr8 14790001 14875000 0 0 Deletion 85000 LOC_Os08g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1656-S Chr8 14790001 14875000 0 0 Deletion 85000 LOC_Os08g24570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1656-S Chr8 14790001 14875000 0 0 Deletion 85000 LOC_Os08g24580 retrotransposon protein, putative, Ty3-gypsy subclass FN1656-S Chr8 14790001 14875000 0 0 Deletion 85000 LOC_Os08g24590 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1656-S Chr8 14823122 14823122 0 0 Insertion 1 FN1656-S Chr8 15027507 Chr7 11295934 0 Translocation 0 FN1656-S Chr8 17948399 Chr7 9687590 0 Translocation 0 FN1656-S Chr8 20947315 20947316 0 0 Deletion 1 LOC_Os08g33540 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed FN1656-S Chr8 22966125 22966132 0 0 Deletion 7 FN1656-S Chr8 24029328 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1656-S Chr8 24897129 24897138 0 0 Deletion 9 FN1656-S Chr8 4646296 4646299 0 0 Deletion 3 FN1656-S Chr9 10102964 10102965 0 0 Deletion 1 FN1656-S Chr9 2319397 2319404 0 0 Deletion 7 FN1656-S Chr9 4743966 4743968 0 0 Deletion 2 FN1656-S Chr9 5589398 5589402 0 0 Deletion 4 FN1656-S Chr9 8718997 8718999 0 0 Deletion 2