FN1658-S Chr1 16779637 T-G 0 0 Single Base Substitution 0 HET FN1658-S Chr1 19749394 19749395 0 0 Insertion 1 HET FN1658-S Chr1 23558315 G-A 0 0 Single Base Substitution 0 Homo FN1658-S Chr1 25469575 G-A 0 0 Single Base Substitution 0 HET FN1658-S Chr1 37304413 G-C 0 0 Single Base Substitution 0 Homo FN1658-S Chr1 38522457 38522458 0 0 Deletion 1 frameshift_variant&splice_region_variant Homo LOC_Os01g66330 ATP-dependent Clp protease ATP-binding subunit clpX, putative, expressed FN1658-S Chr1 38653332 G-T 0 0 Single Base Substitution 0 Homo FN1658-S Chr1 39012022 39012038 0 0 Deletion 16 HET FN1658-S Chr10 10556292 T-A 0 0 Single Base Substitution 0 Homo FN1658-S Chr10 17308774 G-A 0 0 Single Base Substitution 0 HET FN1658-S Chr10 18799365 G-A 0 0 Single Base Substitution 0 Homo FN1658-S Chr10 19201891 T-C 0 0 Single Base Substitution 0 Homo FN1658-S Chr10 19631559 19631573 0 0 Deletion 14 Homo FN1658-S Chr10 19650955 T-A 0 0 Single Base Substitution 0 Homo FN1658-S Chr10 2479073 C-T 0 0 Single Base Substitution 0 HET FN1658-S Chr10 2479074 G-T 0 0 Single Base Substitution 0 HET FN1658-S Chr10 4258782 Chr4 4257957 0 Translocation 0 FN1658-S Chr10 9097300 9097304 0 0 Deletion 4 Homo FN1658-S Chr11 11448423 C-A 0 0 Single Base Substitution 0 HET FN1658-S Chr11 11477660 G-A 0 0 Single Base Substitution 0 Homo FN1658-S Chr11 25840027 Chr1 15531752 0 Translocation 0 FN1658-S Chr11 2661505 G-A 0 0 Single Base Substitution 0 Homo FN1658-S Chr11 27858310 Chr1 3226367 0 Translocation 0 LOC_Os11g46020 retrotransposon protein, putative, unclassified, expressed FN1658-S Chr12 11347039 11347042 0 0 Deletion 3 Homo FN1658-S Chr12 13311053 C-A 0 0 Single Base Substitution 0 HET FN1658-S Chr12 13740523 13740529 0 0 Deletion 6 HET FN1658-S Chr12 22723266 22723268 0 0 Insertion 2 HET FN1658-S Chr12 24125136 T-C 0 0 Single Base Substitution 0 HET FN1658-S Chr12 24369131 24369133 0 0 Insertion 2 HET FN1658-S Chr12 2473716 2473718 0 0 Insertion 2 HET FN1658-S Chr12 25707765 Chr10 9381467 0 Translocation 0 FN1658-S Chr12 25707765 Chr10 9381467 0 Translocation 0 LOC_Os10g18460 expressed protein FN1658-S Chr12 696990 Chr11 652946 0 Translocation 0 LOC_Os12g02240 expressed protein FN1658-S Chr12 7340110 7340111 0 0 Insertion 1 HET FN1658-S Chr2 15157284 G-T 0 0 Single Base Substitution 0 HET FN1658-S Chr2 17186373 A-G 0 0 Single Base Substitution 0 HET FN1658-S Chr2 18057874 C-G 0 0 Single Base Substitution 0 HET FN1658-S Chr2 26048605 C-T 0 0 Single Base Substitution 0 Homo FN1658-S Chr2 3276655 3276933 0 0 Inversion 0 FN1658-S Chr2 35288623 35288637 0 0 Deletion 14 Homo FN1658-S Chr2 4168161 T-C 0 0 Single Base Substitution 0 Homo FN1658-S Chr3 1399937 1400264 0 0 Inversion 0 LOC_Os03g03260 homeobox domain containing protein, expressed FN1658-S Chr3 15243749 A-T 0 0 Single Base Substitution 0 Homo FN1658-S Chr3 15505561 15505569 0 0 Deletion 8 frameshift_variant Homo LOC_Os03g27080 calmodulin-binding transcription activator 2, putative, expressed FN1658-S Chr3 17332280 17332596 0 0 Inversion 0 FN1658-S Chr3 19971746 A-G 0 0 Single Base Substitution 0 HET FN1658-S Chr3 21017393 G-A 0 0 Single Base Substitution 0 Homo FN1658-S Chr3 22270275 T-A 0 0 Single Base Substitution 0 Homo FN1658-S Chr3 30521747 T-A 0 0 Single Base Substitution 0 HET FN1658-S Chr4 15932829 Chr3 13456995 0 Translocation 0 FN1658-S Chr4 15932829 Chr3 13456995 0 Translocation 0 LOC_Os03g23250 retrotransposon protein, putative, unclassified, expressed FN1658-S Chr4 26721388 C-T 0 0 Single Base Substitution 0 Homo FN1658-S Chr5 10259843 C-G 0 0 Single Base Substitution 0 Homo FN1658-S Chr5 12489650 12489651 0 0 Deletion 1 HET FN1658-S Chr5 13436916 G-T 0 0 Single Base Substitution 0 Homo FN1658-S Chr5 13827323 13827324 0 0 Deletion 1 Homo FN1658-S Chr5 17157773 17158035 0 0 Inversion 0 FN1658-S Chr5 17157773 17158035 0 0 Inversion 0 LOC_Os05g29690 retrotransposon protein, putative, unclassified, expressed FN1658-S Chr5 25539264 C-T 0 0 Single Base Substitution 0 HET FN1658-S Chr5 259852 T-C 0 0 Single Base Substitution 0 Homo FN1658-S Chr5 3913797 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g07350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1658-S Chr5 4264925 4264939 0 0 Deletion 14 Homo FN1658-S Chr5 4283918 4283925 0 0 Deletion 7 frameshift_variant HET LOC_Os05g07910 expressed protein FN1658-S Chr6 13895693 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g23780 glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed FN1658-S Chr6 16196322 A-T 0 0 Single Base Substitution 0 HET FN1658-S Chr6 19806731 19806734 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os06g34010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1658-S Chr6 24213373 A-G 0 0 Single Base Substitution 0 HET FN1658-S Chr6 787919 1261738 0 0 Inversion 0 FN1658-S Chr6 787919 1261738 0 0 Inversion 0 LOC_Os06g03310 retrotransposon protein, putative, unclassified, expressed FN1658-S Chr6 787926 1261745 0 0 Inversion 0 FN1658-S Chr6 787926 1261745 0 0 Inversion 0 LOC_Os06g03310 retrotransposon protein, putative, unclassified, expressed FN1658-S Chr7 10225285 10225286 0 0 Deletion 1 HET FN1658-S Chr7 15237861 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g26490 ankyrin repeat domain containing protein, expressed FN1658-S Chr7 19065533 G-A 0 0 Single Base Substitution 0 Homo FN1658-S Chr7 19065535 C-A 0 0 Single Base Substitution 0 Homo FN1658-S Chr7 22073714 C-T 0 0 Single Base Substitution 0 Homo FN1658-S Chr8 12000805 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g20030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1658-S Chr8 1396769 G-T 0 0 Single Base Substitution 0 Homo FN1658-S Chr8 644653 Chr2 16487695 0 Translocation 0 FN1658-S Chr8 645289 Chr7 28994513 0 Translocation 0 FN1658-S Chr8 645289 Chr7 28994513 0 Translocation 0 LOC_Os07g48460 stress responsive protein, putative, expressed FN1658-S Chr8 647705 Chr7 28994504 0 Translocation 0 FN1658-S Chr8 647705 Chr7 28994504 0 Translocation 0 LOC_Os07g48460 stress responsive protein, putative, expressed FN1658-S Chr8 647718 Chr3 15426300 0 Translocation 0 FN1658-S Chr8 656261 Chr3 15425534 0 Translocation 0 LOC_Os08g02030 transferase family protein, putative, expressed FN1658-S Chr8 7109349 G-A 0 0 Single Base Substitution 0 Homo FN1658-S Chr9 13225981 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g21820 retrotransposon protein, putative, unclassified, expressed FN1658-S Chr9 21478779 21478781 0 0 Insertion 2 HET FN1658-S Chr9 5495450 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1658-S Chr9 7253929 7253998 0 0 Deletion 69 HET FN1658-S Chr9 7777318 7777758 0 0 Inversion 0