FN1660-S Chr1 13350433 13350433 0 0 Insertion 21 FN1660-S Chr1 1375553 1375564 0 0 Deletion 11 LOC_Os01g03420 seven in absentia protein family protein, putative, expressed FN1660-S Chr1 15689146 15689147 0 0 Deletion 1 FN1660-S Chr1 19062047 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr1 22421619 22421619 0 0 Insertion 1 FN1660-S Chr1 26262240 26262248 0 0 Deletion 8 FN1660-S Chr1 40236435 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g69230 exo70 exocyst complex subunit domain containing protein, expressed FN1660-S Chr1 5031632 5031632 0 0 Insertion 2 FN1660-S Chr1 5554798 5583469 0 0 Deletion 28671 LOC_Os01g10504 OsMADS3 - MADS-box family gene with MIKCc type-box, expressed FN1660-S Chr1 5554798 5583469 0 0 Deletion 28671 LOC_Os01g10520 expressed protein FN1660-S Chr1 6521132 6549964 0 0 Deletion 28832 LOC_Os01g11970 expressed protein FN1660-S Chr1 6521132 6549964 0 0 Deletion 28832 LOC_Os01g11980 SFT2, putative, expressed FN1660-S Chr1 6521132 6549964 0 0 Deletion 28832 LOC_Os01g11990 expressed protein FN1660-S Chr1 6521132 6549964 0 0 Deletion 28832 LOC_Os01g12000 expressed protein FN1660-S Chr1 6521132 6549964 0 0 Deletion 28832 LOC_Os01g12010 hypothetical protein FN1660-S Chr1 6521132 6549964 0 0 Deletion 28832 LOC_Os01g12020 LTPL18 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN1660-S Chr1 6521132 6549964 0 0 Deletion 28832 LOC_Os01g12030 endoglucanase precursor, putative, expressed FN1660-S Chr1 6521132 6549964 0 0 Deletion 28832 LOC_Os01g12040 transposon protein, putative, unclassified, expressed FN1660-S Chr1 6535298 6535298 0 0 Tandem-Duplication 0 LOC_Os01g12000 expressed protein FN1660-S Chr10 13502029 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g26070 pentatricopeptide, putative, expressed FN1660-S Chr11 10193082 10193083 0 0 Deletion 1 FN1660-S Chr11 11493372 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN1660-S Chr11 13346466 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g23180 hypothetical protein FN1660-S Chr11 13696896 A-T 0 0 Single Base Substitution 0 INTRON HET FN1660-S Chr11 21011729 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g35800 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1660-S Chr11 23874735 23874739 0 0 Deletion 4 LOC_Os11g40040 transposon protein, putative, unclassified, expressed FN1660-S Chr11 28439782 28439943 0 0 Deletion 161 FN1660-S Chr11 5645707 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1660-S Chr11 934743 934744 0 0 Deletion 1 FN1660-S Chr12 10762243 C-A 0 0 Single Base Substitution 0 INTRON HET FN1660-S Chr12 14304436 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1660-S Chr12 14565436 14565437 0 0 Deletion 1 FN1660-S Chr12 17501400 17501411 0 0 Deletion 11 FN1660-S Chr12 19633468 19633469 0 0 Deletion 1 FN1660-S Chr12 23163029 A-G 0 0 Single Base Substitution 0 INTRON HET FN1660-S Chr12 24302505 24302507 0 0 Deletion 2 FN1660-S Chr12 24361140 24361153 0 0 Deletion 13 FN1660-S Chr12 27018183 Chr7 4769691 0 Translocation 0 LOC_Os07g09130 CHCH domain containing protein, expressed FN1660-S Chr12 9056295 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g15910 retrotransposon protein, putative, unclassified, expressed FN1660-S Chr12 9883714 9883733 0 0 Deletion 19 LOC_Os12g17270 transposon protein, putative, CACTA, En/Spm sub-class FN1660-S Chr2 13112086 13112088 0 0 Deletion 2 FN1660-S Chr2 14744257 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr2 15995611 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1660-S Chr2 25200159 25200160 0 0 Deletion 1 FN1660-S Chr2 26043189 26043190 0 0 Deletion 1 FN1660-S Chr2 35847890 35847892 0 0 Deletion 2 FN1660-S Chr2 5805641 5805642 0 0 Deletion 1 FN1660-S Chr2 8693974 8693976 0 0 Deletion 2 FN1660-S Chr3 11914889 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr3 22806477 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr3 29171496 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g51030 phytochrome A, putative, expressed FN1660-S Chr3 3151860 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g06290 OsSub27 - Putative Subtilisin homologue, expressed FN1660-S Chr3 9416377 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr4 13136832 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr4 15467932 15468095 0 0 Deletion 163 FN1660-S Chr4 16618361 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr4 16618362 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr4 21553656 A-T 0 0 Single Base Substitution 0 INTRON HET FN1660-S Chr4 23800004 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr4 23908116 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr4 24926462 24926462 0 0 Insertion 2 FN1660-S Chr4 25834734 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN1660-S Chr4 28824811 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr4 30373114 30616851 0 0 Inversion 243737 LOC_Os04g51260 expressed protein FN1660-S Chr4 352743 352747 0 0 Deletion 4 FN1660-S Chr4 4664314 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr5 15904703 15904704 0 0 Deletion 1 FN1660-S Chr5 2987508 C-A 0 0 Single Base Substitution 0 INTRON HET FN1660-S Chr5 3125273 3125273 0 0 Insertion 8 FN1660-S Chr6 1216143 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr6 15154401 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr6 21778151 A-G 0 0 Single Base Substitution 0 INTRON HET FN1660-S Chr6 26501757 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1660-S Chr6 2880079 2880079 0 0 Insertion 1 FN1660-S Chr6 5434705 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1660-S Chr6 5888046 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr6 9495787 9495788 0 0 Deletion 1 FN1660-S Chr7 15986382 15986382 0 0 Insertion 4 FN1660-S Chr7 21461588 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1660-S Chr7 26072016 26072017 0 0 Deletion 1 FN1660-S Chr7 26938426 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr7 8962845 8962847 0 0 Deletion 2 FN1660-S Chr8 15808409 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g25980 retrotransposon protein, putative, unclassified, expressed FN1660-S Chr8 18655811 19268779 0 0 Inversion 612968 FN1660-S Chr8 20202193 20202207 0 0 Deletion 14 FN1660-S Chr8 24087856 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1660-S Chr8 24087857 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1660-S Chr8 465264 465404 0 0 Deletion 140 FN1660-S Chr8 5889593 T-C 0 0 Single Base Substitution 0 INTRON HET FN1660-S Chr9 16951638 16951639 0 0 Deletion 1 FN1660-S Chr9 17151533 17151534 0 0 Deletion 1 FN1660-S Chr9 17298029 17298029 0 0 Insertion 1 FN1660-S Chr9 17975533 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN1660-S Chr9 20558206 20558207 0 0 Deletion 1 LOC_Os09g35740 expressed protein FN1660-S Chr9 3560610 3560633 0 0 Deletion 23 LOC_Os09g07260 retrotransposon protein, putative, Ty3-gypsy subclass FN1660-S Chr9 488389 Chr6 11179783 0 Translocation 0 LOC_Os06g19610 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed FN1660-S Chr9 488389 Chr6 11179783 0 Translocation 0 LOC_Os09g01680 DNA repair protein RAD51 homolog 4, putative, expressed FN1660-S Chr9 488420 Chr6 11179452 0 Translocation 0 LOC_Os09g01680 DNA repair protein RAD51 homolog 4, putative, expressed FN1660-S Chr9 8234866 8235001 0 0 Deletion 135 LOC_Os09g13980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed