FN1669-S Chr1 11086863 C-A 0 0 Single Base Substitution 0 HET FN1669-S Chr1 17232530 17232531 0 0 Deletion 1 HET FN1669-S Chr1 2108818 2109151 0 0 Inversion 0 FN1669-S Chr1 2108818 2109151 0 0 Inversion 0 LOC_Os01g04690 expressed protein FN1669-S Chr1 21207069 21207070 0 0 Deletion 1 HET FN1669-S Chr1 22683747 22683911 0 0 Inversion 0 LOC_Os01g40200 XIK, putative, expressed FN1669-S Chr1 27979975 G-T 0 0 Single Base Substitution 0 Homo FN1669-S Chr1 3642688 3642943 0 0 Inversion 0 FN1669-S Chr1 37563750 37564037 0 0 Inversion 0 LOC_Os01g64740 expressed protein FN1669-S Chr1 42422808 42423174 0 0 Inversion 0 LOC_Os01g73150 expressed protein FN1669-S Chr1 8088859 A-T 0 0 Single Base Substitution 0 HET FN1669-S Chr1 9032805 9032806 0 0 Deletion 1 HET FN1669-S Chr10 10600041 G-T 0 0 Single Base Substitution 0 Homo FN1669-S Chr10 12733718 Chr8 9303483 0 Translocation 0 LOC_Os08g15300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1669-S Chr10 12733718 Chr8 9303483 0 Translocation 0 LOC_Os10g24760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1669-S Chr10 15398045 G-A 0 0 Single Base Substitution 0 Homo FN1669-S Chr10 15568932 15568948 0 0 Deletion 16 HET FN1669-S Chr10 17916850 17917250 0 0 Inversion 0 LOC_Os10g33800 lactate/malate dehydrogenase, putative, expressed FN1669-S Chr10 19042382 19042566 0 0 Inversion 0 FN1669-S Chr10 21681890 21682213 0 0 Inversion 0 FN1669-S Chr10 22195985 22196273 0 0 Inversion 0 FN1669-S Chr10 9840597 9841208 0 0 Inversion 0 LOC_Os10g19310 transposon protein, putative, CACTA, En/Spm sub-class FN1669-S Chr11 11037880 C-T 0 0 Single Base Substitution 0 Homo FN1669-S Chr11 13740429 C-T 0 0 Single Base Substitution 0 HET FN1669-S Chr11 14269426 14269642 0 0 Inversion 0 FN1669-S Chr11 23229216 A-C 0 0 Single Base Substitution 0 HET FN1669-S Chr12 22929920 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g37340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1669-S Chr12 23443526 G-T 0 0 Single Base Substitution 0 HET FN1669-S Chr12 24450866 G-C 0 0 Single Base Substitution 0 Homo FN1669-S Chr2 12545708 12545978 0 0 Inversion 0 LOC_Os02g21130 retrotransposon protein, putative, unclassified, expressed FN1669-S Chr2 15428227 C-T 0 0 Single Base Substitution 0 HET FN1669-S Chr2 23462995 23462996 0 0 Deletion 1 HET FN1669-S Chr2 24073780 24074064 0 0 Inversion 0 LOC_Os02g39840 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed FN1669-S Chr2 25008262 25008589 0 0 Inversion 0 LOC_Os02g41680 phenylalanine ammonia-lyase, putative, expressed FN1669-S Chr2 2677785 C-T 0 0 Single Base Substitution 0 Homo FN1669-S Chr3 12912746 12912881 0 0 Inversion 0 FN1669-S Chr3 19367332 G-T 0 0 Single Base Substitution 0 Homo FN1669-S Chr3 3278795 3279141 0 0 Inversion 0 FN1669-S Chr3 3462921 3463131 0 0 Inversion 0 LOC_Os03g06830 expressed protein FN1669-S Chr3 35072705 G-T 0 0 Single Base Substitution 0 HET FN1669-S Chr3 7557776 A-G 0 0 Single Base Substitution 0 Homo FN1669-S Chr3 9926848 G-A 0 0 Single Base Substitution 0 Homo FN1669-S Chr4 11026197 11026322 0 0 Inversion 0 FN1669-S Chr4 14418717 14418718 0 0 Insertion 1 HET FN1669-S Chr4 32040721 Chr3 31809571 0 Translocation 0 FN1669-S Chr4 32703254 32703780 0 0 Inversion 0 FN1669-S Chr4 32703254 32703780 0 0 Inversion 0 LOC_Os04g55000 cullin, putative, expressed FN1669-S Chr4 32899185 G-T 0 0 Single Base Substitution 0 HET FN1669-S Chr4 33608480 G-T 0 0 Single Base Substitution 0 HET FN1669-S Chr4 3552401 3552402 0 0 Deletion 1 HET FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08290 ZOS4-04 - C2H2 zinc finger protein, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08300 retrotransposon protein, putative, Ty3-gypsy subclass FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08310 expressed protein FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08320 YIF1B, putative, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08330 expressed protein FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08340 OsSigP3 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08350 cysteine synthase, chloroplast/chromoplast precursor, putative, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08360 expressed protein FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08370 Leucine Rich Repeat family protein, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08390 Leucine Rich Repeat family protein, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08400 retrotransposon protein, putative, unclassified, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08410 ELM2 domain containing protein, putative, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08415 expressed protein FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08430 retrotransposon protein, putative, unclassified, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08440 retrotransposon protein, putative, unclassified, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08450 expressed protein FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08460 OsFBX115 - F-box domain containing protein, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08470 OsFBX116 - F-box domain containing protein, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08480 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08500 conserved hypothetical protein FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08510 OsFBX117 - F-box domain containing protein, expressed FN1669-S Chr4 4421001 4619000 0 0 Deletion 197999 LOC_Os04g08520 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08550 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08570 uncharacterized PE-PGRS family protein PE_PGRS20, putative, expressed FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08580 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08590 expressed protein FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08600 ZOS4-05 - C2H2 zinc finger protein, expressed FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08610 retrotransposon protein, putative, unclassified, expressed FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08620 retrotransposon protein, putative, unclassified FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08630 expressed protein FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08640 cadmium tolerance factor, putative, expressed FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08650 expressed protein FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08660 expressed protein FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08670 retrotransposon protein, putative, unclassified, expressed FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08680 retrotransposon protein, putative, unclassified, expressed FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08690 expressed protein FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08700 hypothetical protein FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08710 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08720 transposon protein, putative, CACTA, En/Spm sub-class FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08730 hypothetical protein FN1669-S Chr4 4629001 4748000 0 0 Deletion 118999 LOC_Os04g08740 ethylene receptor, putative, expressed FN1669-S Chr4 7150768 A-T 0 0 Single Base Substitution 0 HET FN1669-S Chr4 7346744 C-T 0 0 Single Base Substitution 0 HET FN1669-S Chr5 20355402 20355404 0 0 Deletion 2 frameshift_variant HET LOC_Os05g34340 retrotransposon protein, putative, Ty3-gypsy subclass FN1669-S Chr5 23693813 23693997 0 0 Inversion 0 LOC_Os05g40320 PPR repeat domain containing protein, putative, expressed FN1669-S Chr5 27261187 G-T 0 0 Single Base Substitution 0 HET FN1669-S Chr7 18305797 18305978 0 0 Inversion 0 FN1669-S Chr7 25010996 G-A 0 0 Single Base Substitution 0 HET FN1669-S Chr7 2860482 2860484 0 0 Insertion 2 HET FN1669-S Chr7 4328513 4328727 0 0 Inversion 0 FN1669-S Chr8 15839272 15839285 0 0 Deletion 13 HET FN1669-S Chr8 21467812 21467814 0 0 Deletion 2 frameshift_variant HET LOC_Os08g34240 CAMK_KIN1/SNF1/Nim1_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN1669-S Chr8 23088073 T-A 0 0 Single Base Substitution 0 Homo FN1669-S Chr8 7270493 A-T 0 0 Single Base Substitution 0 Homo FN1669-S Chr9 12234791 12235003 0 0 Inversion 0 FN1669-S Chr9 17298477 17298478 0 0 Deletion 1 HET FN1669-S Chr9 18761345 18761818 0 0 Inversion 0 LOC_Os09g31200 AN1-like zinc finger domain containing protein, expressed FN1669-S Chr9 4486862 4486868 0 0 Deletion 6 Homo