FN1679-S Chr1 11906510 11906765 0 0 Inversion 0 LOC_Os01g21310 expressed protein FN1679-S Chr1 16181107 A-G 0 0 Single Base Substitution 0 HET FN1679-S Chr1 17054878 A-G 0 0 Single Base Substitution 0 Homo FN1679-S Chr1 174845 G-A 0 0 Single Base Substitution 0 HET FN1679-S Chr1 24703559 24703736 0 0 Inversion 0 FN1679-S Chr1 34189590 34189771 0 0 Inversion 0 FN1679-S Chr1 40022824 40022828 0 0 Deletion 4 frameshift_variant HET LOC_Os01g68870 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed FN1679-S Chr1 5362871 5363107 0 0 Inversion 0 FN1679-S Chr1 8276449 8276457 0 0 Deletion 8 Homo FN1679-S Chr10 18657719 18657985 0 0 Inversion 0 LOC_Os10g34940 expressed protein FN1679-S Chr10 19043169 19043175 0 0 Deletion 6 HET FN1679-S Chr10 3758576 A-T 0 0 Single Base Substitution 0 Homo FN1679-S Chr10 5516391 5516638 0 0 Inversion 0 LOC_Os10g10100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1679-S Chr10 6406642 G-C 0 0 Single Base Substitution 0 Homo FN1679-S Chr11 14569106 14569420 0 0 Inversion 0 LOC_Os11g25560 BHLH transcription factor, putative, expressed FN1679-S Chr11 16012961 A-C 0 0 Single Base Substitution 0 Homo FN1679-S Chr11 16360904 16360914 0 0 Deletion 10 Homo FN1679-S Chr11 22479923 22479928 0 0 Deletion 5 Homo FN1679-S Chr11 23101178 G-A 0 0 Single Base Substitution 0 Homo FN1679-S Chr12 14785741 14785742 0 0 Deletion 1 frameshift_variant HET LOC_Os12g25550 transposon protein, putative, CACTA, En/Spm sub-class FN1679-S Chr12 22071692 22071881 0 0 Inversion 0 FN1679-S Chr12 3828054 3828247 0 0 Inversion 0 FN1679-S Chr2 15153001 15189000 0 0 Deletion 35999 LOC_Os02g25860 glutelin, putative, expressed FN1679-S Chr2 15153001 15189000 0 0 Deletion 35999 LOC_Os02g25870 elongation factor Tu, putative, expressed FN1679-S Chr2 15153001 15189000 0 0 Deletion 35999 LOC_Os02g25880 retrotransposon protein, putative, unclassified, expressed FN1679-S Chr2 15153001 15189000 0 0 Deletion 35999 LOC_Os02g25890 expressed protein FN1679-S Chr2 1660892 1660900 0 0 Deletion 8 HET FN1679-S Chr2 21009364 21009370 0 0 Deletion 6 HET FN1679-S Chr2 22452845 22453058 0 0 Inversion 0 LOC_Os02g37140 expressed protein FN1679-S Chr2 23925598 23925601 0 0 Deletion 3 HET FN1679-S Chr2 26419856 A-G 0 0 Single Base Substitution 0 HET FN1679-S Chr2 27396098 27396462 0 0 Inversion 0 FN1679-S Chr2 30320568 30320833 0 0 Inversion 0 FN1679-S Chr2 32150172 32150400 0 0 Inversion 0 LOC_Os02g52540 EF hand family protein, putative, expressed FN1679-S Chr3 13190752 13191168 0 0 Inversion 0 FN1679-S Chr3 14574457 14574477 0 0 Deletion 20 Homo FN1679-S Chr3 18497510 18497517 0 0 Deletion 7 Homo FN1679-S Chr3 23762801 23762824 0 0 Deletion 23 Homo FN1679-S Chr3 25245278 25245570 0 0 Inversion 0 FN1679-S Chr3 27909180 C-T 0 0 Single Base Substitution 0 HET FN1679-S Chr3 31582346 31582348 0 0 Insertion 2 HET FN1679-S Chr3 8076092 8076696 0 0 Inversion 0 FN1679-S Chr4 12800001 12886000 0 0 Deletion 85999 LOC_Os04g22600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1679-S Chr4 12800001 12886000 0 0 Deletion 85999 LOC_Os04g22610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1679-S Chr4 12800001 12886000 0 0 Deletion 85999 LOC_Os04g22620 retrotransposon protein, putative, Ty3-gypsy subclass FN1679-S Chr4 12800001 12886000 0 0 Deletion 85999 LOC_Os04g22630 retrotransposon protein, putative, unclassified, expressed FN1679-S Chr4 12800001 12886000 0 0 Deletion 85999 LOC_Os04g22640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1679-S Chr4 12800001 12886000 0 0 Deletion 85999 LOC_Os04g22660 tropinone reductase, putative, expressed FN1679-S Chr4 12800001 12886000 0 0 Deletion 85999 LOC_Os04g22670 hypothetical protein FN1679-S Chr4 12800001 12886000 0 0 Deletion 85999 LOC_Os04g22680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1679-S Chr4 12800001 12886000 0 0 Deletion 85999 LOC_Os04g22690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1679-S Chr4 12800001 12886000 0 0 Deletion 85999 LOC_Os04g22700 expressed protein FN1679-S Chr4 12800001 12886000 0 0 Deletion 85999 LOC_Os04g22720 expressed protein FN1679-S Chr4 12800477 Chr1 30398590 0 Translocation 0 LOC_Os04g22600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1679-S Chr4 12801588 Chr1 30413013 0 Translocation 0 LOC_Os01g52890 expressed protein FN1679-S Chr4 12801588 Chr1 30413013 0 Translocation 0 LOC_Os04g22600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1679-S Chr4 23304507 C-A 0 0 Single Base Substitution 0 Homo FN1679-S Chr4 28294103 28294393 0 0 Inversion 0 LOC_Os04g47690 HMG1/2, putative, expressed FN1679-S Chr4 32853480 32853845 0 0 Inversion 0 FN1679-S Chr4 5822614 T-C 0 0 Single Base Substitution 0 Homo FN1679-S Chr5 10729452 G-A 0 0 Single Base Substitution 0 Homo FN1679-S Chr5 12508210 C-A 0 0 Single Base Substitution 0 HET FN1679-S Chr5 16008844 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g27520 expressed protein FN1679-S Chr5 19366859 19366989 0 0 Inversion 0 LOC_Os05g33040 cyclin, putative, expressed FN1679-S Chr5 20767939 20768047 0 0 Inversion 0 FN1679-S Chr5 23493360 G-T 0 0 Single Base Substitution 0 Homo FN1679-S Chr5 28785601 A-T 0 0 Single Base Substitution 0 Homo FN1679-S Chr5 7397978 T-C 0 0 Single Base Substitution 0 Homo FN1679-S Chr6 10766144 10766306 0 0 Inversion 0 LOC_Os06g18940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1679-S Chr6 12447510 12447520 0 0 Deletion 10 HET FN1679-S Chr6 19630922 19630928 0 0 Deletion 6 Homo FN1679-S Chr6 21700344 T-C 0 0 Single Base Substitution 0 Homo FN1679-S Chr6 24996954 24997321 0 0 Inversion 0 LOC_Os06g41710 CW-type Zinc Finger, putative, expressed FN1679-S Chr6 4866414 4866697 0 0 Inversion 0 FN1679-S Chr6 5760745 5761118 0 0 Inversion 0 LOC_Os06g11010 eukaryotic aspartyl protease domain containing protein, expressed FN1679-S Chr6 9496312 9496555 0 0 Inversion 0 LOC_Os06g16560 expressed protein FN1679-S Chr7 10209382 10209577 0 0 Inversion 0 FN1679-S Chr7 14347612 G-C 0 0 Single Base Substitution 0 Homo FN1679-S Chr7 14989225 14989488 0 0 Inversion 0 LOC_Os07g26110 membrane associated DUF588 domain containing protein, putative, expressed FN1679-S Chr7 17709928 Chr1 30990138 0 Translocation 0 FN1679-S Chr7 22804080 T-A 0 0 Single Base Substitution 0 HET FN1679-S Chr7 23377643 23377645 0 0 Deletion 2 HET FN1679-S Chr7 26539910 G-A 0 0 Single Base Substitution 0 HET FN1679-S Chr7 26539916 C-A 0 0 Single Base Substitution 0 HET FN1679-S Chr7 26655546 26655562 0 0 Deletion 16 HET FN1679-S Chr7 26784244 26784448 0 0 Inversion 0 LOC_Os07g44860 gibberellin receptor GID1L2, putative, expressed FN1679-S Chr7 27673686 G-A 0 0 Single Base Substitution 0 HET FN1679-S Chr7 28738941 28739198 0 0 Inversion 0 LOC_Os07g48120 expressed protein FN1679-S Chr7 8585143 A-C 0 0 Single Base Substitution 0 Homo FN1679-S Chr8 10866412 T-C 0 0 Single Base Substitution 0 HET FN1679-S Chr8 13370121 Chr4 2808015 0 Translocation 0 FN1679-S Chr8 18526655 C-T 0 0 Single Base Substitution 0 Homo FN1679-S Chr8 19947571 G-A 0 0 Single Base Substitution 0 HET FN1679-S Chr8 25972874 25972890 0 0 Deletion 16 frameshift_variant HET LOC_Os08g41090 peroxidase precursor, putative, expressed FN1679-S Chr8 27648249 27648639 0 0 Inversion 0 FN1679-S Chr9 12522160 G-A 0 0 Single Base Substitution 0 HET FN1679-S Chr9 17866125 A-C 0 0 Single Base Substitution 0 HET FN1679-S Chr9 19479611 19479612 0 0 Deletion 1 Homo FN1679-S Chr9 3835582 3835585 0 0 Deletion 3 Homo FN1679-S Chr9 590292 590599 0 0 Inversion 0