FN1693-S Chr1 17459200 17459204 0 0 Deletion 4 HET FN1693-S Chr1 21142225 C-T 0 0 Single Base Substitution 0 Homo FN1693-S Chr1 6678115 6678121 0 0 Deletion 6 HET FN1693-S Chr10 12989614 Chr5 10540090 0 Translocation 0 LOC_Os05g18294 SEC14 cytosolic factor family protein, putative, expressed FN1693-S Chr10 12989614 Chr5 10540090 0 Translocation 0 LOC_Os10g25160 expressed protein FN1693-S Chr10 14222078 14222081 0 0 Insertion 3 HET FN1693-S Chr10 14378282 14378283 0 0 Insertion 1 frameshift_variant HET LOC_Os10g27260 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1693-S Chr10 14771404 15167502 0 0 Inversion 0 FN1693-S Chr10 14771404 15167502 0 0 Inversion 0 LOC_Os10g29100 MBTB44 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN1693-S Chr10 14771407 15167504 0 0 Inversion 0 FN1693-S Chr10 14771407 15167504 0 0 Inversion 0 LOC_Os10g29100 MBTB44 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN1693-S Chr10 5100348 5100349 0 0 Insertion 1 frameshift_variant HET LOC_Os10g09460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr10 7555960 Chr8 6126921 0 Translocation 0 FN1693-S Chr11 16749525 G-A 0 0 Single Base Substitution 0 Homo FN1693-S Chr11 1897182 1897184 0 0 Insertion 2 HET FN1693-S Chr11 23679491 G-T 0 0 Single Base Substitution 0 HET FN1693-S Chr11 25704136 25740967 0 0 Inversion 0 FN1693-S Chr11 4989801 Chr9 12121808 0 Translocation 0 FN1693-S Chr11 7068117 7070009 0 0 Inversion 0 LOC_Os11g12580 conserved hypothetical protein FN1693-S Chr12 12175371 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g21660 retrotransposon protein, putative, unclassified, expressed FN1693-S Chr12 1644145 Chr6 19265140 0 Translocation 0 FN1693-S Chr12 1644145 Chr6 19265140 0 Translocation 0 LOC_Os06g33090 peroxidase precursor, putative, expressed FN1693-S Chr12 21110106 21110108 0 0 Deletion 2 HET FN1693-S Chr12 26886516 26886530 0 0 Deletion 14 HET FN1693-S Chr12 27080986 Chr1 954253 0 Translocation 0 FN1693-S Chr12 27080986 Chr1 954253 0 Translocation 0 LOC_Os01g02750 protein kinase domain containing protein, expressed FN1693-S Chr2 22026852 22026853 0 0 Deletion 1 frameshift_variant HET LOC_Os02g36470 retrotransposon protein, putative, unclassified, expressed FN1693-S Chr2 29982996 30029061 0 0 Inversion 0 FN1693-S Chr2 29982996 30029061 0 0 Inversion 0 LOC_Os02g49100 retrotransposon protein, putative, unclassified FN1693-S Chr2 3627805 3627806 0 0 Deletion 1 HET FN1693-S Chr2 6178762 G-A 0 0 Single Base Substitution 0 HET FN1693-S Chr2 8815518 8815741 0 0 Inversion 0 FN1693-S Chr3 11988939 G-A 0 0 Single Base Substitution 0 Homo FN1693-S Chr3 24678257 Chr2 9611229 0 Translocation 0 FN1693-S Chr3 34000664 G-A 0 0 Single Base Substitution 0 Homo FN1693-S Chr3 34079738 G-A 0 0 Single Base Substitution 0 Homo FN1693-S Chr3 34079740 A-T 0 0 Single Base Substitution 0 Homo FN1693-S Chr3 5823053 C-T 0 0 Single Base Substitution 0 Homo FN1693-S Chr4 10720978 A-T 0 0 Single Base Substitution 0 Homo FN1693-S Chr4 11145276 11145279 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os04g19990 retrotransposon protein, putative, unclassified, expressed FN1693-S Chr4 11290552 Chr2 11320721 0 Translocation 0 LOC_Os04g20230 neighbor of COX4, putative, expressed FN1693-S Chr4 12568938 C-A 0 0 Single Base Substitution 0 Homo FN1693-S Chr4 17056925 T-G 0 0 Single Base Substitution 0 HET FN1693-S Chr4 17714037 T-G 0 0 Single Base Substitution 0 HET FN1693-S Chr4 28010432 28010447 0 0 Deletion 15 HET FN1693-S Chr4 33370183 33370185 0 0 Deletion 2 HET FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18294 SEC14 cytosolic factor family protein, putative, expressed FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18310 retrotransposon protein, putative, Ty3-gypsy subclass FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18320 transposon protein, putative, unclassified FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18350 retrotransposon, putative, centromere-specific, expressed FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18360 retrotransposon protein, putative, unclassified FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18370 retrotransposon protein, putative, unclassified FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18390 retrotransposon protein, putative, Ty3-gypsy subclass FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18400 retrotransposon protein, putative, unclassified FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18410 retrotransposon protein, putative, Ty1-copia subclass FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18419 retrotransposon, putative, centromere-specific FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18446 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18470 CRAL/TRIO domain containing protein, expressed FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18480 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr5 10540001 10716000 0 0 Deletion 175999 LOC_Os05g18520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr5 10540092 10942423 0 0 Inversion 0 LOC_Os05g18294 SEC14 cytosolic factor family protein, putative, expressed FN1693-S Chr5 16152509 16152759 0 0 Inversion 0 LOC_Os05g27730 WRKY53, expressed FN1693-S Chr5 17041733 17041737 0 0 Insertion 4 HET FN1693-S Chr5 20779103 C-T 0 0 Single Base Substitution 0 Homo FN1693-S Chr5 9776752 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR Homo LOC_Os05g17110 retrotransposon protein, putative, unclassified, expressed FN1693-S Chr6 10177896 Chr5 10571821 0 Translocation 0 FN1693-S Chr6 24636507 A-T 0 0 Single Base Substitution 0 Homo FN1693-S Chr6 29567410 29567411 0 0 Insertion 1 HET FN1693-S Chr7 11154001 11165000 0 0 Deletion 10999 LOC_Os07g18840 transposon protein, putative, unclassified, expressed FN1693-S Chr7 11986830 11986833 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os07g20720 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr7 1241762 Chr1 39841277 0 Translocation 0 FN1693-S Chr7 18280214 18280215 0 0 Insertion 1 frameshift_variant HET LOC_Os07g30880 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr7 20468724 20468728 0 0 Insertion 4 HET FN1693-S Chr7 4124573 4124575 0 0 Insertion 2 HET FN1693-S Chr7 9200056 Chr2 13477577 0 Translocation 0 FN1693-S Chr7 9200056 Chr2 13477577 0 Translocation 0 LOC_Os02g22610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1693-S Chr8 12161140 12161141 0 0 Insertion 1 frameshift_variant HET LOC_Os08g20260 retrotransposon protein, putative, Ty3-gypsy subclass FN1693-S Chr8 13369756 T-C 0 0 Single Base Substitution 0 Homo FN1693-S Chr8 13504233 T-G 0 0 Single Base Substitution 0 HET FN1693-S Chr8 13504242 G-T 0 0 Single Base Substitution 0 Homo FN1693-S Chr8 13505238 14351409 0 0 Inversion 0 FN1693-S Chr8 13505238 14351409 0 0 Inversion 0 LOC_Os08g23720 glucan endo-1,3-beta-glucosidase precursor, putative, expressed FN1693-S Chr8 13642396 13642397 0 0 Insertion 1 frameshift_variant HET LOC_Os08g22680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1693-S Chr8 150900 150901 0 0 Deletion 1 Homo FN1693-S Chr8 22962738 T-A 0 0 Single Base Substitution 0 HET FN1693-S Chr8 23617237 23617283 0 0 Insertion 46 HET FN1693-S Chr8 8073141 A-G 0 0 Single Base Substitution 0 HET FN1693-S Chr9 4283540 4283542 0 0 Deletion 2 Homo FN1693-S Chr9 8289626 Chr6 11646557 0 Translocation 0 FN1693-S Chr9 8290066 Chr6 11646437 0 Translocation 0