FN1703-S Chr1 1259504 1259923 0 0 Deletion 419 HET FN1703-S Chr1 28056993 G-A 0 0 Single Base Substitution 0 HET FN1703-S Chr1 28056994 T-A 0 0 Single Base Substitution 0 HET FN1703-S Chr1 42553508 42553512 0 0 Deletion 4 frameshift_variant Homo LOC_Os01g73430 RNA polymerase IV largest subunit, putative, expressed FN1703-S Chr10 12583910 12583911 0 0 Deletion 1 frameshift_variant HET LOC_Os10g24510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1703-S Chr10 13764672 Chr2 29617581 0 Translocation 0 FN1703-S Chr10 15983382 15983460 0 0 Insertion 78 HET FN1703-S Chr10 1895170 G-A 0 0 Single Base Substitution 0 Homo FN1703-S Chr10 19840084 T-C 0 0 Single Base Substitution 0 Homo FN1703-S Chr10 5392997 A-G 0 0 Single Base Substitution 0 Homo FN1703-S Chr10 5393004 A-T 0 0 Single Base Substitution 0 Homo FN1703-S Chr11 12087648 12087651 0 0 Deletion 3 HET FN1703-S Chr11 12115576 12115577 0 0 Insertion 1 HET FN1703-S Chr11 13220824 Chr1 40950394 0 Translocation 0 FN1703-S Chr11 17701376 Chr8 24046280 0 Translocation 0 FN1703-S Chr11 22961382 C-A 0 0 Single Base Substitution 0 HET FN1703-S Chr11 2729463 2729527 0 0 Insertion 64 HET FN1703-S Chr11 27370142 27370143 0 0 Insertion 1 HET FN1703-S Chr11 2785663 Chr8 4650014 0 Translocation 0 FN1703-S Chr11 2785663 Chr8 4650014 0 Translocation 0 LOC_Os08g08170 transposon protein, putative, CACTA, En/Spm sub-class FN1703-S Chr11 4231113 Chr1 31989862 0 Translocation 0 FN1703-S Chr11 5009699 Chr1 36411664 0 Translocation 0 FN1703-S Chr11 5009699 Chr1 36411664 0 Translocation 0 LOC_Os01g62870 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN1703-S Chr11 6602442 Chr8 2455439 0 Translocation 0 LOC_Os11g11890 protein kinase domain containing protein, expressed FN1703-S Chr12 16959412 Chr8 9984465 0 Translocation 0 FN1703-S Chr12 16959412 Chr8 9984465 0 Translocation 0 LOC_Os08g16359 expressed protein FN1703-S Chr12 21526175 Chr8 7731028 0 Translocation 0 FN1703-S Chr12 21526175 Chr8 7731028 0 Translocation 0 LOC_Os08g13014 expressed protein FN1703-S Chr12 22237226 Chr1 13535625 0 Translocation 0 FN1703-S Chr12 23760671 23760743 0 0 Insertion 72 HET FN1703-S Chr12 23986652 24332913 0 0 Inversion 0 FN1703-S Chr12 25604127 G-A 0 0 Single Base Substitution 0 Homo FN1703-S Chr12 27107844 Chr7 22632770 0 Translocation 0 FN1703-S Chr12 5079759 5167034 0 0 Inversion 0 LOC_Os12g09640 protein phosphatase 2C, putative, expressed FN1703-S Chr12 5079766 5167048 0 0 Inversion 0 LOC_Os12g09640 protein phosphatase 2C, putative, expressed FN1703-S Chr12 8029020 8029250 0 0 Inversion 0 FN1703-S Chr2 1057536 A-T 0 0 Single Base Substitution 0 HET FN1703-S Chr2 11738340 11738341 0 0 Deletion 1 Homo FN1703-S Chr2 11741964 C-T 0 0 Single Base Substitution 0 Homo FN1703-S Chr2 20875995 20876790 0 0 Inversion 0 FN1703-S Chr2 23259485 23259713 0 0 Inversion 0 LOC_Os02g38470 B3 DNA binding domain containing protein, expressed FN1703-S Chr3 1358513 1358514 0 0 Deletion 1 HET FN1703-S Chr3 13864560 G-A 0 0 Single Base Substitution 0 HET FN1703-S Chr3 26452293 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g46760 hypothetical protein FN1703-S Chr3 27725836 27725842 0 0 Deletion 6 Homo FN1703-S Chr3 5021303 A-G 0 0 Single Base Substitution 0 HET FN1703-S Chr3 5848050 T-A 0 0 Single Base Substitution 0 HET FN1703-S Chr3 7321207 A-G 0 0 Single Base Substitution 0 HET FN1703-S Chr4 129110 129116 0 0 Insertion 6 inframe_insertion HET LOC_Os04g01170 expressed protein FN1703-S Chr4 15937086 Chr2 15425627 0 Translocation 0 LOC_Os02g26270 retrotransposon protein, putative, unclassified, expressed FN1703-S Chr4 15937086 Chr2 15425627 0 Translocation 0 LOC_Os04g26940 retrotransposon protein, putative, unclassified FN1703-S Chr4 1614704 1614708 0 0 Deletion 4 HET FN1703-S Chr4 1971643 C-T 0 0 Single Base Substitution 0 Homo FN1703-S Chr4 1971646 C-G 0 0 Single Base Substitution 0 Homo FN1703-S Chr4 1971650 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g04230 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed FN1703-S Chr4 20234533 20234535 0 0 Deletion 2 frameshift_variant HET LOC_Os04g33410 retrotransposon protein, putative, unclassified, expressed FN1703-S Chr4 598620 598623 0 0 Deletion 3 Homo FN1703-S Chr4 6959755 C-T 0 0 Single Base Substitution 0 Homo FN1703-S Chr5 12568234 12568235 0 0 Insertion 1 HET FN1703-S Chr5 3816332 3816587 0 0 Inversion 0 LOC_Os05g07220 kelch repeat-containing protein, putative, expressed FN1703-S Chr6 11360675 11416581 0 0 Inversion 0 FN1703-S Chr6 12440578 A-T 0 0 Single Base Substitution 0 Homo FN1703-S Chr6 12886846 13163291 0 0 Inversion 0 FN1703-S Chr6 12886846 13163291 0 0 Inversion 0 LOC_Os06g22650 VHS and GAT domain containing protein, expressed FN1703-S Chr6 12887001 12955000 0 0 Deletion 67999 LOC_Os06g22220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1703-S Chr6 12887001 12955000 0 0 Deletion 67999 LOC_Os06g22230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1703-S Chr6 12887001 12955000 0 0 Deletion 67999 LOC_Os06g22240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1703-S Chr6 12887001 12955000 0 0 Deletion 67999 LOC_Os06g22260 conserved hypothetical protein FN1703-S Chr6 12887001 12955000 0 0 Deletion 67999 LOC_Os06g22280 expressed protein FN1703-S Chr6 12887001 12955000 0 0 Deletion 67999 LOC_Os06g22290 legume lectins beta domain containing protein, expressed FN1703-S Chr6 12887001 12955000 0 0 Deletion 67999 LOC_Os06g22300 transposon protein, putative, Ac/Ds sub-class, expressed FN1703-S Chr6 12887001 12955000 0 0 Deletion 67999 LOC_Os06g22310 retrotransposon protein, putative, unclassified, expressed FN1703-S Chr6 12954575 13210202 0 0 Inversion 0 FN1703-S Chr6 12954575 13210202 0 0 Inversion 0 LOC_Os06g22710 transposon protein, putative, unclassified, expressed FN1703-S Chr6 13163300 13263150 0 0 Inversion 0 LOC_Os06g22650 VHS and GAT domain containing protein, expressed FN1703-S Chr6 13163300 13263150 0 0 Inversion 0 LOC_Os06g22780 retrotransposon protein, putative, Ty3-gypsy subclass FN1703-S Chr6 14891183 C-T 0 0 Single Base Substitution 0 Homo FN1703-S Chr6 15138344 15138345 0 0 Deletion 1 frameshift_variant HET LOC_Os06g25890 retrotransposon protein, putative, unclassified, expressed FN1703-S Chr6 19630066 Chr3 24413583 0 Translocation 0 FN1703-S Chr6 2387897 2388180 0 0 Inversion 0 LOC_Os06g05310 transferase family protein, putative, expressed FN1703-S Chr6 26320541 G-A 0 0 Single Base Substitution 0 Homo FN1703-S Chr6 27084503 Chr1 27776529 0 Translocation 0 FN1703-S Chr6 6712706 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g12380 expressed protein FN1703-S Chr6 7135270 7135512 0 0 Inversion 0 LOC_Os06g13030 OsLIM - LIM domain protein, putative actin-binding protein and transcription factor, expressed FN1703-S Chr6 84604 84958 0 0 Deletion 354 HET FN1703-S Chr7 13266463 Chr3 14801962 0 Translocation 0 LOC_Os07g23480 retrotransposon protein, putative, unclassified, expressed FN1703-S Chr7 1978566 A-G 0 0 Single Base Substitution 0 HET FN1703-S Chr7 21213183 21213301 0 0 Inversion 0 FN1703-S Chr7 22194697 Chr3 17909148 0 Translocation 0 FN1703-S Chr7 22710315 G-A 0 0 Single Base Substitution 0 HET FN1703-S Chr7 27672568 27672816 0 0 Inversion 0 FN1703-S Chr7 27808674 G-T 0 0 Single Base Substitution 0 HET FN1703-S Chr7 3128357 3128636 0 0 Inversion 0 LOC_Os07g06470 nuclear transcription factor Y subunit, putative, expressed FN1703-S Chr7 596157 G-A 0 0 Single Base Substitution 0 HET FN1703-S Chr8 13782176 13782177 0 0 Deletion 1 HET FN1703-S Chr8 15910403 T-C 0 0 Single Base Substitution 0 HET FN1703-S Chr8 17051091 17051092 0 0 Deletion 1 HET FN1703-S Chr8 17072251 17072550 0 0 Inversion 0 FN1703-S Chr8 18763199 18763200 0 0 Deletion 1 HET FN1703-S Chr8 23664592 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g37400 ZF-HD homeobox protein, putative, expressed FN1703-S Chr8 23950858 G-A 0 0 Single Base Substitution 0 HET FN1703-S Chr8 4650007 Chr2 21197283 0 Translocation 0 LOC_Os08g08170 transposon protein, putative, CACTA, En/Spm sub-class FN1703-S Chr8 9092449 9092568 0 0 Inversion 0 FN1703-S Chr8 984767 985024 0 0 Inversion 0 LOC_Os08g02460 expressed protein FN1703-S Chr9 19471648 19471831 0 0 Inversion 0 FN1703-S Chr9 3446706 Chr8 7125803 0 Translocation 0 LOC_Os08g12100 expressed protein FN1703-S Chr9 3446706 Chr8 7125803 0 Translocation 0 LOC_Os09g07100 hypothetical protein FN1703-S Chr9 4413723 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g08460 transposon protein, putative, unclassified, expressed FN1703-S Chr9 787958 787959 0 0 Deletion 1 HET