FN1709-S Chr1 1141323 1141325 0 0 Insertion 2 HET FN1709-S Chr1 34149424 C-T 0 0 Single Base Substitution 0 Homo FN1709-S Chr10 11557286 T-A 0 0 Single Base Substitution 0 Homo FN1709-S Chr10 11914050 Chr7 19193559 0 Translocation 0 FN1709-S Chr10 11914057 Chr7 19192854 0 Translocation 0 FN1709-S Chr10 12195523 12195525 0 0 Insertion 2 HET FN1709-S Chr10 22767030 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g42280 cyclase/dehydrase family protein, putative, expressed FN1709-S Chr10 6183740 C-G 0 0 Single Base Substitution 0 Homo FN1709-S Chr10 8851954 8851955 0 0 Deletion 1 HET FN1709-S Chr11 10898934 10898936 0 0 Deletion 2 HET FN1709-S Chr11 14156723 C-T 0 0 Single Base Substitution 0 HET FN1709-S Chr11 16277072 Chr5 25618396 0 Translocation 0 LOC_Os11g28300 uncharacterized protein family UPF0016 domain containing protein, expressed FN1709-S Chr11 19817778 Chr1 39521938 0 Translocation 0 FN1709-S Chr11 27545551 Chr9 9599688 0 Translocation 0 FN1709-S Chr11 5023396 Chr1 11701693 0 Translocation 0 FN1709-S Chr11 8617750 Chr3 21846120 0 Translocation 0 FN1709-S Chr12 10148236 A-G 0 0 Single Base Substitution 0 HET FN1709-S Chr12 10686231 Chr6 27688801 0 Translocation 0 FN1709-S Chr12 10686231 Chr6 27688801 0 Translocation 0 LOC_Os06g45740 retrotransposon protein, putative, unclassified, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19120 transposon protein, putative, unclassified, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19130 retrotransposon protein, putative, unclassified, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19140 retrotransposon protein, putative, unclassified, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19170 expressed protein FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19180 ATP binding protein, putative, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19190 transposon protein, putative, CACTA, En/Spm sub-class FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19200 transposon protein, putative, CACTA, En/Spm sub-class FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19210 transposon protein, putative, CACTA, En/Spm sub-class FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19220 transposon protein, putative, CACTA, En/Spm sub-class FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19230 retrotransposon, putative, centromere-specific, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19250 retrotransposon protein, putative, unclassified, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19260 tetratricopeptide-like helical, putative, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19270 expressed protein FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19280 expressed protein FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19285 retrotransposon protein, putative, unclassified, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19290 AGC_AGC_other_NDRh_TRCd.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19304 Fe-S metabolism associated domain containing protein, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19320 expressed protein FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19330 expressed protein FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19350 expressed protein FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19370 DNA polymerase I family protein, expressed FN1709-S Chr12 11096001 11274000 0 0 Deletion 177999 LOC_Os12g19381 ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed FN1709-S Chr12 11295001 11332000 0 0 Deletion 36999 LOC_Os12g19440 hypothetical protein FN1709-S Chr12 11295001 11332000 0 0 Deletion 36999 LOC_Os12g19450 retrotransposon protein, putative, unclassified FN1709-S Chr12 11295001 11332000 0 0 Deletion 36999 LOC_Os12g19460 transposon protein, putative, unclassified, expressed FN1709-S Chr12 11295001 11332000 0 0 Deletion 36999 LOC_Os12g19470 ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed FN1709-S Chr12 11295001 11332000 0 0 Deletion 36999 LOC_Os12g19480 retrotransposon, putative, centromere-specific, expressed FN1709-S Chr12 11337001 11409000 0 0 Deletion 71999 LOC_Os12g19510 retrotransposon, putative, centromere-specific, expressed FN1709-S Chr12 11337001 11409000 0 0 Deletion 71999 LOC_Os12g19530 ATP-binding region, ATPase-like domain-containing protein, putative, expressed FN1709-S Chr12 11337001 11409000 0 0 Deletion 71999 LOC_Os12g19549 telomerase reverse transcriptase, putative, expressed FN1709-S Chr12 11337001 11409000 0 0 Deletion 71999 LOC_Os12g19570 retrotransposon protein, putative, Ty3-gypsy subclass FN1709-S Chr12 11407243 11407244 0 0 Insertion 1 HET FN1709-S Chr12 11414001 11448000 0 0 Deletion 33999 LOC_Os12g19580 photosynthetic reaction center protein, putative, expressed FN1709-S Chr12 11414001 11448000 0 0 Deletion 33999 LOC_Os12g19590 WD domain, G-beta repeat domain containing protein, expressed FN1709-S Chr12 11414001 11448000 0 0 Deletion 33999 LOC_Os12g19600 hypothetical protein FN1709-S Chr12 11414001 11448000 0 0 Deletion 33999 LOC_Os12g19610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1709-S Chr12 11414001 11448000 0 0 Deletion 33999 LOC_Os12g19620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1709-S Chr12 13244419 Chr6 18212923 0 Translocation 0 FN1709-S Chr12 1443643 1443645 0 0 Insertion 2 HET FN1709-S Chr12 15752614 A-G 0 0 Single Base Substitution 0 HET FN1709-S Chr12 17232001 17278000 0 0 Deletion 45999 LOC_Os12g29110 retrotransposon protein, putative, Ty3-gypsy subclass FN1709-S Chr12 17232001 17278000 0 0 Deletion 45999 LOC_Os12g29120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1709-S Chr12 17232001 17278000 0 0 Deletion 45999 LOC_Os12g29130 retrotransposon protein, putative, Ty3-gypsy subclass FN1709-S Chr12 17232001 17278000 0 0 Deletion 45999 LOC_Os12g29140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1709-S Chr12 17232001 17278000 0 0 Deletion 45999 LOC_Os12g29150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1709-S Chr12 17232001 17278000 0 0 Deletion 45999 LOC_Os12g29160 LTPL105 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed FN1709-S Chr12 17232001 17278000 0 0 Deletion 45999 LOC_Os12g29170 expressed protein FN1709-S Chr12 17232001 17278000 0 0 Deletion 45999 LOC_Os12g29180 expressed protein FN1709-S Chr12 25735822 25735823 0 0 Deletion 1 HET FN1709-S Chr2 10656464 G-A 0 0 Single Base Substitution 0 HET FN1709-S Chr2 17055209 17055221 0 0 Insertion 12 HET FN1709-S Chr2 18866167 T-C 0 0 Single Base Substitution 0 HET FN1709-S Chr2 20156695 20156696 0 0 Insertion 1 HET FN1709-S Chr2 20195155 A-G 0 0 Single Base Substitution 0 HET FN1709-S Chr2 6841754 G-A 0 0 Single Base Substitution 0 HET FN1709-S Chr3 18002951 18002960 0 0 Deletion 9 HET FN1709-S Chr3 21593437 C-T 0 0 Single Base Substitution 0 HET FN1709-S Chr3 24933161 24933162 0 0 Insertion 1 HET FN1709-S Chr3 25680471 C-T 0 0 Single Base Substitution 0 Homo FN1709-S Chr3 33659680 33659681 0 0 Deletion 1 frameshift_variant Homo LOC_Os03g59120 pheophorbide a oxygenase, chloroplast precursor, putative, expressed FN1709-S Chr3 35487584 C-T 0 0 Single Base Substitution 0 HET FN1709-S Chr3 36221114 G-A 0 0 Single Base Substitution 0 HET FN1709-S Chr3 4549721 A-G 0 0 Single Base Substitution 0 HET FN1709-S Chr4 19692472 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g32670 exostosin family domain containing protein, expressed FN1709-S Chr4 20486975 20486980 0 0 Deletion 5 frameshift_variant Homo LOC_Os04g33820 OsFBX132 - F-box domain containing protein, expressed FN1709-S Chr4 20728374 20954285 0 0 Inversion 0 FN1709-S Chr4 2647560 A-T 0 0 Single Base Substitution 0 HET FN1709-S Chr4 30271001 30310000 0 0 Deletion 38999 LOC_Os04g51120 ENTH domain containing protein, expressed FN1709-S Chr4 30271001 30310000 0 0 Deletion 38999 LOC_Os04g51130 expressed protein FN1709-S Chr4 30271001 30310000 0 0 Deletion 38999 LOC_Os04g51140 E2F-related protein, putative, expressed FN1709-S Chr4 30271001 30310000 0 0 Deletion 38999 LOC_Os04g51150 transposon protein, putative, unclassified, expressed FN1709-S Chr4 30271001 30310000 0 0 Deletion 38999 LOC_Os04g51160 transposon protein, putative, unclassified, expressed FN1709-S Chr4 30271001 30310000 0 0 Deletion 38999 LOC_Os04g51166 expressed protein FN1709-S Chr4 30271001 30310000 0 0 Deletion 38999 LOC_Os04g51172 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed FN1709-S Chr4 31961960 C-T 0 0 Single Base Substitution 0 HET FN1709-S Chr4 7105600 C-T 0 0 Single Base Substitution 0 HET FN1709-S Chr4 7201639 G-A 0 0 Single Base Substitution 0 HET FN1709-S Chr5 13920851 T-A 0 0 Single Base Substitution 0 HET FN1709-S Chr5 16189655 G-T 0 0 Single Base Substitution 0 HET FN1709-S Chr5 1813905 C-T 0 0 Single Base Substitution 0 HET FN1709-S Chr5 29781798 C-T 0 0 Single Base Substitution 0 Homo FN1709-S Chr6 29613694 29613695 0 0 Deletion 1 HET FN1709-S Chr7 11692435 C-T 0 0 Single Base Substitution 0 Homo FN1709-S Chr7 12487321 A-G 0 0 Single Base Substitution 0 HET FN1709-S Chr7 12990563 12990570 0 0 Deletion 7 Homo FN1709-S Chr7 23665848 G-A 0 0 Single Base Substitution 0 Homo FN1709-S Chr7 24647854 24717589 0 0 Inversion 0 FN1709-S Chr7 24647858 Chr4 30270476 0 Translocation 0 FN1709-S Chr7 24647858 Chr4 30270476 0 Translocation 0 LOC_Os04g51110 WD repeat-containing protein, putative, expressed FN1709-S Chr7 24648560 Chr4 30312586 0 Translocation 0 FN1709-S Chr7 24648560 Chr4 30312586 0 Translocation 0 LOC_Os04g51180 GPR89A, putative, expressed FN1709-S Chr7 24648561 24717591 0 0 Inversion 0 FN1709-S Chr7 399733 399734 0 0 Insertion 1 HET FN1709-S Chr8 10275889 10275891 0 0 Deletion 2 HET FN1709-S Chr8 12587533 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os08g21050 retrotransposon protein, putative, Ty3-gypsy subclass FN1709-S Chr8 16117429 G-T 0 0 Single Base Substitution 0 HET FN1709-S Chr8 8092507 8092508 0 0 Insertion 1 HET FN1709-S Chr9 19375717 G-A 0 0 Single Base Substitution 0 HET FN1709-S Chr9 22089383 22089519 0 0 Inversion 0