FN1728-S Chr1 28107703 T-A 0 0 Single Base Substitution 0 HET FN1728-S Chr1 28107741 G-A 0 0 Single Base Substitution 0 HET FN1728-S Chr1 28646335 C-A 0 0 Single Base Substitution 0 HET FN1728-S Chr1 36308063 G-A 0 0 Single Base Substitution 0 HET FN1728-S Chr1 6565743 6566180 0 0 Inversion 0 LOC_Os01g12070 endoglucanase precursor, putative, expressed FN1728-S Chr1 7572318 7572321 0 0 Deletion 3 HET FN1728-S Chr1 8598088 8598106 0 0 Deletion 18 HET FN1728-S Chr10 10311740 Chr4 5525928 0 Translocation 0 FN1728-S Chr10 3678479 A-C 0 0 Single Base Substitution 0 HET FN1728-S Chr10 5472944 5473293 0 0 Inversion 0 FN1728-S Chr10 705045 C-T 0 0 Single Base Substitution 0 HET FN1728-S Chr11 16678229 G-T 0 0 Single Base Substitution 0 HET FN1728-S Chr11 16678230 C-T 0 0 Single Base Substitution 0 HET FN1728-S Chr11 5127955 Chr1 6039257 0 Translocation 0 FN1728-S Chr12 10628640 Chr6 16470892 0 Translocation 0 LOC_Os12g18374 NB-ARC domain containing protein, expressed FN1728-S Chr12 11624642 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g19950 retrotransposon, putative, centromere-specific, expressed FN1728-S Chr12 14320152 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os12g24930 retrotransposon protein, putative, Ty3-gypsy subclass FN1728-S Chr12 14607472 14607664 0 0 Inversion 0 FN1728-S Chr12 18826712 18826718 0 0 Insertion 6 HET FN1728-S Chr12 24374787 24374788 0 0 Deletion 1 HET FN1728-S Chr12 27317417 Chr11 15082160 0 Translocation 0 FN1728-S Chr12 9181385 9181403 0 0 Deletion 18 HET FN1728-S Chr2 10884143 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g18670 ABC transporter family protein, putative, expressed FN1728-S Chr2 18701741 18701753 0 0 Deletion 12 HET FN1728-S Chr2 25438848 25438852 0 0 Deletion 4 HET FN1728-S Chr2 6670131 T-A 0 0 Single Base Substitution 0 HET FN1728-S Chr3 17790813 17790814 0 0 Deletion 1 HET FN1728-S Chr3 1838424 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g04030 HVA22, putative, expressed FN1728-S Chr3 21400126 C-T 0 0 Single Base Substitution 0 HET FN1728-S Chr3 29541110 29541111 0 0 Deletion 1 Homo FN1728-S Chr3 29547906 29547922 0 0 Deletion 16 Homo FN1728-S Chr3 9740516 G-A 0 0 Single Base Substitution 0 HET FN1728-S Chr5 24884042 24884044 0 0 Deletion 2 HET FN1728-S Chr5 26664665 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g46000 ras-related protein, putative, expressed FN1728-S Chr5 28853318 29582923 0 0 Inversion 0 FN1728-S Chr5 28853324 29582966 0 0 Inversion 0 FN1728-S Chr5 8610001 8649000 0 0 Deletion 38999 LOC_Os05g15170 zinc finger, C3HC4 type domain containing protein, expressed FN1728-S Chr5 8610001 8649000 0 0 Deletion 38999 LOC_Os05g15180 expressed protein FN1728-S Chr5 8610001 8649000 0 0 Deletion 38999 LOC_Os05g15190 retrotransposon protein, putative, unclassified FN1728-S Chr5 8610001 8649000 0 0 Deletion 38999 LOC_Os05g15200 zinc knuckle family protein, expressed FN1728-S Chr5 8610001 8649000 0 0 Deletion 38999 LOC_Os05g15210 retrotransposon protein, putative, unclassified, expressed FN1728-S Chr5 8610001 8649000 0 0 Deletion 38999 LOC_Os05g15220 retrotransposon protein, putative, unclassified, expressed FN1728-S Chr5 8610001 8649000 0 0 Deletion 38999 LOC_Os05g15230 plant protein of unknown function domain containing protein, expressed FN1728-S Chr5 8610001 8649000 0 0 Deletion 38999 LOC_Os05g15240 expressed protein FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15260 retrotransposon protein, putative, Ty3-gypsy subclass FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15300 expressed protein FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15310 expressed protein FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15320 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15330 expressed protein FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15340 retrotransposon protein, putative, unclassified, expressed FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15350 expressed protein FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15360 expressed protein FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15370 ribosomal protein L13, putative, expressed FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15380 lipase class 3, putative, expressed FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15390 retrotransposon protein, putative, Ty3-gypsy subclass FN1728-S Chr5 8654001 8710000 0 0 Deletion 55999 LOC_Os05g15400 retrotransposon protein, putative, unclassified FN1728-S Chr5 9945326 9945327 0 0 Insertion 1 HET FN1728-S Chr6 12709703 12709970 0 0 Inversion 0 LOC_Os06g21980 pantothenate kinase 4, putative, expressed FN1728-S Chr6 14297447 G-A 0 0 Single Base Substitution 0 HET FN1728-S Chr6 14297448 T-A 0 0 Single Base Substitution 0 HET FN1728-S Chr6 16047129 16047198 0 0 Insertion 69 HET FN1728-S Chr6 467147 467148 0 0 Deletion 1 frameshift_variant Homo LOC_Os06g01810 expressed protein FN1728-S Chr6 6626332 C-T 0 0 Single Base Substitution 0 HET FN1728-S Chr6 8313410 8313717 0 0 Inversion 0 LOC_Os06g14740 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed FN1728-S Chr7 18745419 G-T 0 0 Single Base Substitution 0 HET FN1728-S Chr7 2103556 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g04730 expressed protein FN1728-S Chr7 6425782 6425783 0 0 Insertion 1 HET FN1728-S Chr8 14737312 Chr7 5214901 0 Translocation 0 FN1728-S Chr8 19998279 19998712 0 0 Inversion 0 FN1728-S Chr8 26610356 26759846 0 0 Inversion 0 FN1728-S Chr8 26610366 26800610 0 0 Inversion 0 FN1728-S Chr8 26759848 Chr1 967415 0 Translocation 0 FN1728-S Chr8 26800590 Chr1 967400 0 Translocation 0 FN1728-S Chr8 8993012 Chr4 23032110 0 Translocation 0 LOC_Os04g38760 hypothetical protein FN1728-S Chr8 8993012 Chr4 23032110 0 Translocation 0 LOC_Os08g14930 hypothetical protein FN1728-S Chr9 6357517 6357530 0 0 Deletion 13 frameshift_variant HET LOC_Os09g11420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1728-S Chr9 6357635 G-A 0 0 Single Base Substitution 0 HET