FN1734-S Chr1 17056062 17056088 0 0 Deletion 26 frameshift_variant HET LOC_Os01g31190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1734-S Chr1 20105391 20106615 0 0 Inversion 0 FN1734-S Chr1 36075788 G-A 0 0 Single Base Substitution 0 HET FN1734-S Chr1 37667001 37678000 0 0 Deletion 10999 LOC_Os01g64890 CorA-like magnesium transporter protein, putative, expressed FN1734-S Chr1 37667001 37678000 0 0 Deletion 10999 LOC_Os01g64900 HEAT, putative, expressed FN1734-S Chr1 39845783 C-G 0 0 Single Base Substitution 0 HET FN1734-S Chr1 41591047 41591048 0 0 Insertion 1 HET FN1734-S Chr10 10540511 Chr1 38170057 0 Translocation 0 FN1734-S Chr10 10540511 Chr1 38170057 0 Translocation 0 LOC_Os01g65750 transposon protein, putative, unclassified, expressed FN1734-S Chr10 20738872 Chr3 25343032 0 Translocation 0 FN1734-S Chr10 20738872 Chr3 25343032 0 Translocation 0 LOC_Os03g44900 CCR4-NOT transcription factor, putative, expressed FN1734-S Chr10 21982380 C-G 0 0 Single Base Substitution 0 HET FN1734-S Chr10 22905633 G-T 0 0 Single Base Substitution 0 HET FN1734-S Chr11 25772785 25772788 0 0 Insertion 3 HET FN1734-S Chr11 2682625 2682944 0 0 Inversion 0 FN1734-S Chr11 2682625 2682944 0 0 Inversion 0 LOC_Os11g05800 HVA22, putative, expressed FN1734-S Chr11 6641847 6832561 0 0 Inversion 0 FN1734-S Chr11 6641847 6832561 0 0 Inversion 0 LOC_Os11g12240 retrotransposon protein, putative, unclassified, expressed FN1734-S Chr12 10520727 10520728 0 0 Deletion 1 HET FN1734-S Chr12 11995653 11995654 0 0 Insertion 1 HET FN1734-S Chr12 14537244 14538633 0 0 Inversion 0 FN1734-S Chr12 14537412 14538940 0 0 Inversion 0 FN1734-S Chr12 15721069 15721071 0 0 Insertion 2 HET FN1734-S Chr12 2960173 Chr2 11267535 0 Translocation 0 LOC_Os02g19280 retrotransposon protein, putative, unclassified, expressed FN1734-S Chr12 2960173 Chr2 11267535 0 Translocation 0 LOC_Os12g06230 retrotransposon protein, putative, unclassified, expressed FN1734-S Chr12 3369689 3369691 0 0 Insertion 2 HET FN1734-S Chr2 11964596 11964597 0 0 Deletion 1 HET FN1734-S Chr2 12416310 12978543 0 0 Inversion 0 LOC_Os02g20980 expressed protein FN1734-S Chr2 1697287 T-A 0 0 Single Base Substitution 0 HET FN1734-S Chr2 23921001 23940000 0 0 Deletion 18999 FN1734-S Chr2 27272004 C-A 0 0 Single Base Substitution 0 HET FN1734-S Chr2 27880120 27880125 0 0 Deletion 5 HET FN1734-S Chr2 27887143 27887290 0 0 Inversion 0 LOC_Os02g45780 zinc finger, C3HC4 type domain containing protein, expressed FN1734-S Chr3 12564474 12564476 0 0 Insertion 2 HET FN1734-S Chr3 16852251 16852253 0 0 Insertion 2 HET FN1734-S Chr3 20364070 G-A 0 0 Single Base Substitution 0 HET FN1734-S Chr3 25299027 25299223 0 0 Inversion 0 LOC_Os03g44840 choline transporter-related, putative, expressed FN1734-S Chr3 26905001 26916000 0 0 Deletion 10999 FN1734-S Chr3 32459731 Chr1 35462498 0 Translocation 0 FN1734-S Chr3 7827865 7828270 0 0 Inversion 0 FN1734-S Chr3 7827865 7828270 0 0 Inversion 0 LOC_Os03g14390 expressed protein FN1734-S Chr4 10182469 10182470 0 0 Insertion 1 HET FN1734-S Chr4 10915131 10915132 0 0 Insertion 1 frameshift_variant HET LOC_Os04g19590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1734-S Chr4 11826572 11826573 0 0 Deletion 1 frameshift_variant HET LOC_Os04g21030 retrotransposon protein, putative, unclassified, expressed FN1734-S Chr4 12754778 G-C 0 0 Single Base Substitution 0 HET FN1734-S Chr4 2313217 2313219 0 0 Insertion 2 HET FN1734-S Chr4 23252001 23262000 0 0 Deletion 9999 FN1734-S Chr4 24713489 24713490 0 0 Deletion 1 frameshift_variant HET LOC_Os04g41690 transposon protein, putative, unclassified, expressed FN1734-S Chr4 27757786 27758046 0 0 Inversion 0 FN1734-S Chr4 8712135 G-C 0 0 Single Base Substitution 0 HET FN1734-S Chr4 9549507 9549509 0 0 Deletion 2 HET FN1734-S Chr4 9576661 9576726 0 0 Deletion 65 frameshift_variant HET LOC_Os04g17500 expressed protein FN1734-S Chr5 11753304 C-G 0 0 Single Base Substitution 0 Homo FN1734-S Chr5 17232419 Chr3 20467848 0 Translocation 0 LOC_Os03g36890 retrotransposon protein, putative, unclassified, expressed FN1734-S Chr5 17232419 Chr3 20467848 0 Translocation 0 LOC_Os05g29780 retrotransposon protein, putative, unclassified, expressed FN1734-S Chr5 20214090 G-A 0 0 Single Base Substitution 0 HET FN1734-S Chr5 6129687 6482207 0 0 Inversion 0 FN1734-S Chr5 6129699 6482219 0 0 Inversion 0 FN1734-S Chr5 7664025 7664026 0 0 Insertion 1 HET FN1734-S Chr5 9017197 9017209 0 0 Deletion 12 disruptive_inframe_deletion HET LOC_Os05g15970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1734-S Chr6 14548126 T-C 0 0 Single Base Substitution 0 HET FN1734-S Chr6 17540443 A-T 0 0 Single Base Substitution 0 HET FN1734-S Chr6 18214619 T-A 0 0 Single Base Substitution 0 HET FN1734-S Chr6 29619020 29619021 0 0 Deletion 1 frameshift_variant HET LOC_Os06g48920 expressed protein FN1734-S Chr6 3088930 G-T 0 0 Single Base Substitution 0 HET FN1734-S Chr6 428097 Chr3 23730051 0 Translocation 0 LOC_Os06g01730 DNA ligase I, putative, expressed FN1734-S Chr7 1987098 1987413 0 0 Inversion 0 LOC_Os07g04500 expressed protein FN1734-S Chr7 21840737 21840885 0 0 Inversion 0 FN1734-S Chr7 22554021 22554022 0 0 Insertion 1 HET FN1734-S Chr7 2280346 Chr4 20113981 0 Translocation 0 FN1734-S Chr7 24489686 Chr2 7072515 0 Translocation 0 FN1734-S Chr7 26760017 G-A 0 0 Single Base Substitution 0 Homo FN1734-S Chr7 27766716 27766751 0 0 Insertion 35 HET FN1734-S Chr7 5293606 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g09940 NBS-LRR resistance protein, putative, expressed FN1734-S Chr7 5897496 T-A 0 0 Single Base Substitution 0 Homo FN1734-S Chr8 17682322 17683531 0 0 Inversion 0 FN1734-S Chr8 17682322 17683531 0 0 Inversion 0 LOC_Os08g28920 hypothetical protein FN1734-S Chr8 20729001 20741000 0 0 Deletion 11999 LOC_Os08g33270 transposon protein, putative, unclassified, expressed FN1734-S Chr8 20729001 20741000 0 0 Deletion 11999 LOC_Os08g33280 ulp1 protease family, C-terminal catalytic domain containing protein, expressed FN1734-S Chr8 2579479 C-A 0 0 Single Base Substitution 0 Homo FN1734-S Chr8 4028096 4028097 0 0 Deletion 1 Homo FN1734-S Chr9 12955377 Chr1 33750971 0 Translocation 0 LOC_Os09g21430 ZOS9-05 - C2H2 zinc finger protein, expressed FN1734-S Chr9 13297181 13297474 0 0 Inversion 0 LOC_Os09g21960 transposon protein, putative, CACTA, En/Spm sub-class FN1734-S Chr9 1334519 C-G 0 0 Single Base Substitution 0 Homo FN1734-S Chr9 1344001 1390000 0 0 Deletion 45999 LOC_Os09g02870 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1734-S Chr9 1344001 1390000 0 0 Deletion 45999 LOC_Os09g02880 hypothetical protein FN1734-S Chr9 1344001 1390000 0 0 Deletion 45999 LOC_Os09g02890 transposon protein, putative, unclassified FN1734-S Chr9 1344001 1390000 0 0 Deletion 45999 LOC_Os09g02900 transposon protein, putative, unclassified FN1734-S Chr9 1344001 1390000 0 0 Deletion 45999 LOC_Os09g02910 expressed protein FN1734-S Chr9 1344001 1390000 0 0 Deletion 45999 LOC_Os09g02920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1734-S Chr9 1344001 1390000 0 0 Deletion 45999 LOC_Os09g02930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1734-S Chr9 1344001 1390000 0 0 Deletion 45999 LOC_Os09g02940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1734-S Chr9 1344001 1390000 0 0 Deletion 45999 LOC_Os09g02950 retrotransposon protein, putative, unclassified, expressed FN1734-S Chr9 17760291 G-A 0 0 Single Base Substitution 0 Homo FN1734-S Chr9 19432913 19433312 0 0 Inversion 0 FN1734-S Chr9 2541645 Chr6 21522627 0 Translocation 0 FN1734-S Chr9 5669484 Chr2 17526015 0 Translocation 0