FN1735-S Chr1 18496345 18789915 0 0 Inversion 0 FN1735-S Chr1 19266542 19342635 0 0 Inversion 0 LOC_Os01g34890 GLUCAN SYNTHASE-LIKE protein, putative, expressed FN1735-S Chr1 27687661 G-T 0 0 Single Base Substitution 0 HET FN1735-S Chr1 29678525 29678648 0 0 Inversion 0 FN1735-S Chr1 32043054 A-G 0 0 Single Base Substitution 0 HET FN1735-S Chr1 7140538 C-T 0 0 Single Base Substitution 0 HET FN1735-S Chr10 11013703 C-T 0 0 Single Base Substitution 0 Homo FN1735-S Chr10 12531123 C-T 0 0 Single Base Substitution 0 Homo FN1735-S Chr10 16316636 A-G 0 0 Single Base Substitution 0 HET FN1735-S Chr10 17239467 T-C 0 0 Single Base Substitution 0 HET FN1735-S Chr10 413270 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g01610 expressed protein FN1735-S Chr10 7130967 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g12770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1735-S Chr11 14356146 Chr7 21168221 0 Translocation 0 LOC_Os07g35390 TKL_IRAK_DUF26-lc.17 - DUF26 kinases have homology to DUF26 containing loci, expressed FN1735-S Chr11 14356146 Chr7 21168221 0 Translocation 0 LOC_Os11g25190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1735-S Chr11 14356351 Chr7 21693128 0 Translocation 0 LOC_Os07g36280 OsFBX241 - F-box domain containing protein, expressed FN1735-S Chr11 14356351 Chr7 21693128 0 Translocation 0 LOC_Os11g25190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1735-S Chr11 21113191 A-T 0 0 Single Base Substitution 0 HET FN1735-S Chr11 5646325 T-A 0 0 Single Base Substitution 0 HET FN1735-S Chr11 7412217 G-A 0 0 Single Base Substitution 0 HET FN1735-S Chr11 8520170 C-T 0 0 Single Base Substitution 0 HET FN1735-S Chr12 15225537 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g26140 retrotransposon protein, putative, unclassified, expressed FN1735-S Chr12 19221222 C-A 0 0 Single Base Substitution 0 HET FN1735-S Chr12 20710693 Chr10 6314387 0 Translocation 0 LOC_Os12g34160 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1735-S Chr12 22162589 22162595 0 0 Deletion 6 Homo FN1735-S Chr12 2669995 2738612 0 0 Inversion 0 FN1735-S Chr12 2669995 2738612 0 0 Inversion 0 LOC_Os12g05940 transposon protein, putative, unclassified, expressed FN1735-S Chr12 2670005 Chr11 16030297 0 Translocation 0 FN1735-S Chr12 2670005 Chr11 16030297 0 Translocation 0 LOC_Os11g27850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g05940 transposon protein, putative, unclassified, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g05950 hypothetical protein FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g05960 expressed protein FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g05970 expressed protein FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g05980 DUF584 domain containing protein, putative, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g05990 No apical meristem protein, putative, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06010 retrotransposon protein, putative, unclassified, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06020 mRNA-decapping enzyme, putative, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06030 OsFBX439 - F-box domain containing protein, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06040 transposon protein, putative, unclassified, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06050 MATE, putative, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06060 amino acid permease family protein, putative, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06070 expressed protein FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06080 expressed protein FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06090 expressed protein FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06100 TLD family protein, putative, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06110 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06120 hypothetical protein FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06130 expressed protein FN1735-S Chr12 2739001 2897000 0 0 Deletion 157999 LOC_Os12g06140 expressed protein FN1735-S Chr12 2896320 Chr11 16030105 0 Translocation 0 FN1735-S Chr12 2896320 Chr11 16030105 0 Translocation 0 LOC_Os11g27850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1735-S Chr12 3274288 3274303 0 0 Deletion 15 HET FN1735-S Chr12 3995526 A-G 0 0 Single Base Substitution 0 Homo FN1735-S Chr12 4141398 4141399 0 0 Deletion 1 Homo FN1735-S Chr2 10194678 10194679 0 0 Deletion 1 HET FN1735-S Chr2 2015503 2015874 0 0 Inversion 0 LOC_Os02g04530 rust resistance-like protein RP1, putative, expressed FN1735-S Chr2 24157573 24157574 0 0 Insertion 1 HET FN1735-S Chr2 24157771 G-A 0 0 Single Base Substitution 0 HET FN1735-S Chr2 35542152 T-C 0 0 Single Base Substitution 0 HET FN1735-S Chr3 13112463 T-C 0 0 Single Base Substitution 0 HET FN1735-S Chr3 13113200 G-C 0 0 Single Base Substitution 0 HET FN1735-S Chr3 15523904 C-T 0 0 Single Base Substitution 0 HET FN1735-S Chr3 19640645 T-C 0 0 Single Base Substitution 0 HET FN1735-S Chr3 19834066 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g35788 retrotransposon protein, putative, unclassified, expressed FN1735-S Chr3 29750257 C-T 0 0 Single Base Substitution 0 Homo FN1735-S Chr3 34634233 34634529 0 0 Inversion 0 LOC_Os03g60950 expressed protein FN1735-S Chr3 7034572 G-A 0 0 Single Base Substitution 0 Homo FN1735-S Chr4 16990382 16990616 0 0 Inversion 0 FN1735-S Chr4 23112158 23112162 0 0 Deletion 4 HET FN1735-S Chr4 29314722 C-G 0 0 Single Base Substitution 0 HET FN1735-S Chr4 29361230 T-A 0 0 Single Base Substitution 0 HET FN1735-S Chr4 3865011 C-A 0 0 Single Base Substitution 0 HET FN1735-S Chr4 4235414 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g07944 retrotransposon, putative, centromere-specific, expressed FN1735-S Chr4 8385329 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g14900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1735-S Chr6 1107683 G-A 0 0 Single Base Substitution 0 HET FN1735-S Chr6 17279524 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g30020 PSP domain containing protein, expressed FN1735-S Chr6 17364138 G-A 0 0 Single Base Substitution 0 Homo FN1735-S Chr6 1764994 T-C 0 0 Single Base Substitution 0 HET FN1735-S Chr6 22966454 T-C 0 0 Single Base Substitution 0 HET FN1735-S Chr6 30588023 C-T 0 0 Single Base Substitution 0 HET FN1735-S Chr6 6624712 7046536 0 0 Inversion 0 FN1735-S Chr6 6624729 7046547 0 0 Inversion 0 FN1735-S Chr7 17171326 17171329 0 0 Deletion 3 HET FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g29970 expressed protein FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g29980 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g29990 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30000 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30010 expressed protein FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30020 anthranilate phosphoribosyltransferase, putative, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30030 retrotransposon protein, putative, unclassified, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30040 retrotransposon protein, putative, unclassified, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30050 retrotransposon protein, putative, unclassified, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30060 retrotransposon protein, putative, unclassified, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30070 retrotransposon protein, putative, unclassified, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30080 retrotransposon protein, putative, unclassified FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30090 actin-depolymerizing factor, putative, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30100 RIN3, putative, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30110 expressed protein FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30120 expressed protein FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30130 MYB family transcription factor, putative, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30150 phosphoribosyl transferase, putative, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30154 POEI2 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30160 trehalose phosphatase, putative, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30170 nitrilase, putative, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30180 transposon protein, putative, unclassified, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30190 retrotransposon protein, putative, unclassified, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30200 tRNA synthetases class II domain containing protein, expressed FN1735-S Chr7 17647001 17847000 0 0 Deletion 199999 LOC_Os07g30210 integral membrane protein DUF6 domain containing protein, expressed FN1735-S Chr7 18622180 Chr1 18638037 0 Translocation 0 LOC_Os01g33869 expressed protein FN1735-S Chr7 18622180 Chr1 18638037 0 Translocation 0 LOC_Os07g31440 expressed protein FN1735-S Chr7 21153658 C-T 0 0 Single Base Substitution 0 HET FN1735-S Chr7 21517681 22275177 0 0 Inversion 0 FN1735-S Chr7 21680216 Chr4 26240978 0 Translocation 0 FN1735-S Chr7 21693122 Chr4 26241053 0 Translocation 0 LOC_Os07g36280 OsFBX241 - F-box domain containing protein, expressed FN1735-S Chr8 19206441 19206452 0 0 Deletion 11 Homo FN1735-S Chr8 20836443 20836445 0 0 Insertion 2 HET FN1735-S Chr8 6685630 T-C 0 0 Single Base Substitution 0 HET FN1735-S Chr9 15563937 15564375 0 0 Inversion 0 FN1735-S Chr9 18012180 18012435 0 0 Inversion 0 LOC_Os09g29620 expressed protein FN1735-S Chr9 18871802 18872107 0 0 Inversion 0 LOC_Os09g31390 transcription factor, putative, expressed FN1735-S Chr9 2206521 2206522 0 0 Deletion 1 frameshift_variant HET LOC_Os09g04190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1735-S Chr9 2562488 T-A 0 0 Single Base Substitution 0 HET