FN1742-S Chr1 12050903 12050904 0 0 Insertion 1 HET FN1742-S Chr1 17819327 G-C 0 0 Single Base Substitution 0 HET FN1742-S Chr1 20823953 20823955 0 0 Deletion 2 HET FN1742-S Chr1 27134019 27134021 0 0 Insertion 2 HET FN1742-S Chr1 28124056 G-A 0 0 Single Base Substitution 0 Homo FN1742-S Chr1 31772635 31772636 0 0 Insertion 1 HET FN1742-S Chr1 33386365 33386373 0 0 Deletion 8 Homo FN1742-S Chr1 33515997 33516000 0 0 Insertion 3 HET FN1742-S Chr1 35197137 35197450 0 0 Inversion 0 FN1742-S Chr1 39481764 39481765 0 0 Deletion 1 HET FN1742-S Chr1 40362001 40380000 0 0 Deletion 17999 LOC_Os01g69850 OsMADS65 - MADS-box family gene with MIKC* type-box, expressed FN1742-S Chr1 40362001 40380000 0 0 Deletion 17999 LOC_Os01g69870 expressed protein FN1742-S Chr1 40362001 40380000 0 0 Deletion 17999 LOC_Os01g69890 expressed protein FN1742-S Chr1 42765371 42765372 0 0 Insertion 1 HET FN1742-S Chr1 7608440 7608442 0 0 Insertion 2 HET FN1742-S Chr1 7905954 7906241 0 0 Inversion 0 FN1742-S Chr10 10832672 10832687 0 0 Deletion 15 HET FN1742-S Chr10 11387839 11387841 0 0 Deletion 2 HET FN1742-S Chr10 14438616 Chr7 21326868 0 Translocation 0 LOC_Os10g27360 no apical meristem protein, putative, expressed FN1742-S Chr10 14438811 Chr7 21008187 0 Translocation 0 LOC_Os10g27360 no apical meristem protein, putative, expressed FN1742-S Chr10 1895220 Chr4 22319456 0 Translocation 0 FN1742-S Chr10 3201738 T-A 0 0 Single Base Substitution 0 HET FN1742-S Chr11 10466791 Chr2 14769436 0 Translocation 0 FN1742-S Chr11 10466791 Chr2 14769436 0 Translocation 0 LOC_Os02g25330 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1742-S Chr11 12699399 Chr7 14859438 0 Translocation 0 LOC_Os11g22130 retrotransposon, putative, centromere-specific, expressed FN1742-S Chr11 1398503 Chr9 17421048 0 Translocation 0 FN1742-S Chr11 14134385 A-C 0 0 Single Base Substitution 0 Homo FN1742-S Chr11 20993421 Chr7 21008190 0 Translocation 0 LOC_Os11g35762 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1742-S Chr11 20993739 Chr10 14438810 0 Translocation 0 LOC_Os10g27360 no apical meristem protein, putative, expressed FN1742-S Chr11 20993739 Chr10 14438810 0 Translocation 0 LOC_Os11g35762 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1742-S Chr11 20993741 Chr7 21326868 0 Translocation 0 LOC_Os11g35762 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1742-S Chr11 26529534 26529538 0 0 Deletion 4 frameshift_variant HET LOC_Os11g43934 pentatricopeptide, putative, expressed FN1742-S Chr11 9110468 Chr7 11162437 0 Translocation 0 LOC_Os11g16470 MLA10, putative, expressed FN1742-S Chr11 9924050 9924059 0 0 Deletion 9 HET FN1742-S Chr12 13371984 Chr10 16479591 0 Translocation 0 LOC_Os12g23590 retrotransposon protein, putative, unclassified FN1742-S Chr12 23872847 G-T 0 0 Single Base Substitution 0 HET FN1742-S Chr12 4117187 G-A 0 0 Single Base Substitution 0 HET FN1742-S Chr12 496706 T-G 0 0 Single Base Substitution 0 HET FN1742-S Chr12 5613186 5613193 0 0 Deletion 7 frameshift_variant HET LOC_Os12g10570 ATP synthase subunit beta, putative, expressed FN1742-S Chr12 5614131 5614132 0 0 Deletion 1 HET FN1742-S Chr12 9951551 Chr6 20870998 0 Translocation 0 FN1742-S Chr2 14271262 14271265 0 0 Insertion 3 HET FN1742-S Chr2 19416460 Chr1 18686916 0 Translocation 0 LOC_Os01g33960 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1742-S Chr2 19416460 Chr1 18686916 0 Translocation 0 LOC_Os02g32690 pleiotropic drug resistance protein 15, putative, expressed FN1742-S Chr2 30277452 G-T 0 0 Single Base Substitution 0 Homo FN1742-S Chr2 6153229 6153230 0 0 Deletion 1 HET FN1742-S Chr3 5013164 5013170 0 0 Deletion 6 HET FN1742-S Chr3 8222801 8222802 0 0 Deletion 1 HET FN1742-S Chr3 9527093 9527400 0 0 Inversion 0 FN1742-S Chr4 15937864 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g26940 retrotransposon protein, putative, unclassified FN1742-S Chr4 33200 33203 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os04g01040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1742-S Chr4 34563303 T-A 0 0 Single Base Substitution 0 Homo FN1742-S Chr5 19696309 A-C 0 0 Single Base Substitution 0 Homo FN1742-S Chr5 26579716 T-A 0 0 Single Base Substitution 0 HET FN1742-S Chr5 29144829 C-T 0 0 Single Base Substitution 0 HET FN1742-S Chr5 8299214 A-T 0 0 Single Base Substitution 0 HET FN1742-S Chr5 9313388 C-G 0 0 Single Base Substitution 0 HET FN1742-S Chr6 16686291 C-T 0 0 Single Base Substitution 0 HET FN1742-S Chr6 4027149 C-T 0 0 Single Base Substitution 0 HET FN1742-S Chr7 10131765 Chr1 2653662 0 Translocation 0 LOC_Os01g05560 expressed protein FN1742-S Chr7 10131765 Chr1 2653662 0 Translocation 0 LOC_Os07g17210 FAS1, putative, expressed FN1742-S Chr7 10133240 Chr1 2653653 0 Translocation 0 LOC_Os01g05560 expressed protein FN1742-S Chr7 10133240 Chr1 2653653 0 Translocation 0 LOC_Os07g17210 FAS1, putative, expressed FN1742-S Chr7 12164074 12164075 0 0 Insertion 1 HET FN1742-S Chr7 18212445 T-A 0 0 Single Base Substitution 0 Homo FN1742-S Chr7 19632642 19632651 0 0 Deletion 9 Homo FN1742-S Chr7 20340604 20340613 0 0 Deletion 9 Homo FN1742-S Chr7 20931165 21326746 0 0 Inversion 0 FN1742-S Chr7 20931315 21025834 0 0 Inversion 0 FN1742-S Chr7 20931315 21025834 0 0 Inversion 0 LOC_Os07g35100 retrotransposon protein, putative, unclassified, expressed FN1742-S Chr7 21008186 Chr1 40380009 0 Translocation 0 FN1742-S Chr7 23524219 23524221 0 0 Insertion 2 HET FN1742-S Chr7 25585925 25585926 0 0 Insertion 1 Homo FN1742-S Chr8 11600363 C-T 0 0 Single Base Substitution 0 HET FN1742-S Chr8 25829092 C-T 0 0 Single Base Substitution 0 HET FN1742-S Chr8 26620581 26620583 0 0 Deletion 2 HET FN1742-S Chr8 28298727 Chr1 40370783 0 Translocation 0 LOC_Os08g45080 expressed protein FN1742-S Chr8 28298731 Chr3 36036469 0 Translocation 0 LOC_Os08g45080 expressed protein FN1742-S Chr8 5990834 6294088 0 0 Inversion 0 FN1742-S Chr8 5990834 6294088 0 0 Inversion 0 LOC_Os08g10680 expressed protein