FN1746-S Chr1 1002373 1002572 0 0 Inversion 0 FN1746-S Chr1 1002373 1002572 0 0 Inversion 0 LOC_Os01g02860 expressed protein FN1746-S Chr1 13175841 13175957 0 0 Inversion 0 FN1746-S Chr1 13595912 13596287 0 0 Inversion 0 LOC_Os01g24120 hypothetical protein FN1746-S Chr1 18672943 18673380 0 0 Inversion 0 LOC_Os01g33950 expressed protein FN1746-S Chr1 18948228 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g34360 transposon protein, putative, CACTA, En/Spm sub-class FN1746-S Chr1 19813944 19814266 0 0 Inversion 0 LOC_Os01g35770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1746-S Chr1 2045100 2045326 0 0 Inversion 0 FN1746-S Chr1 22000475 C-A 0 0 Single Base Substitution 0 Homo FN1746-S Chr1 23006005 23006139 0 0 Inversion 0 LOC_Os01g40720 pentatricopeptide, putative, expressed FN1746-S Chr1 25494351 25494352 0 0 Deletion 1 Homo FN1746-S Chr1 25550643 25550988 0 0 Inversion 0 FN1746-S Chr1 30654252 T-C 0 0 Single Base Substitution 0 Homo FN1746-S Chr1 3512396 3512580 0 0 Inversion 0 LOC_Os01g07410 growth regulator related protein, putative, expressed FN1746-S Chr1 40468787 40469003 0 0 Inversion 0 FN1746-S Chr1 4473716 4473717 0 0 Deletion 1 HET FN1746-S Chr1 4526872 4527072 0 0 Inversion 0 FN1746-S Chr1 6449534 6449739 0 0 Inversion 0 LOC_Os01g11900 hhH-GPD superfamily base excision DNA repair protein, expressed FN1746-S Chr1 7105142 7105555 0 0 Inversion 0 LOC_Os01g12840 expressed protein FN1746-S Chr10 10545128 10545395 0 0 Inversion 0 FN1746-S Chr10 1269640 T-C 0 0 Single Base Substitution 0 HET FN1746-S Chr10 1318857 T-G 0 0 Single Base Substitution 0 HET FN1746-S Chr10 15350967 15351085 0 0 Inversion 0 LOC_Os10g29540 protein kinase domain containing protein, expressed FN1746-S Chr10 15371803 15372113 0 0 Inversion 0 FN1746-S Chr10 15380928 15380936 0 0 Deletion 8 HET FN1746-S Chr10 15571121 15571123 0 0 Insertion 2 HET FN1746-S Chr10 16591244 16591418 0 0 Inversion 0 FN1746-S Chr10 19405895 19406050 0 0 Inversion 0 FN1746-S Chr10 4505724 T-G 0 0 Single Base Substitution 0 HET FN1746-S Chr10 5025186 5025187 0 0 Insertion 1 HET FN1746-S Chr10 5180144 5180147 0 0 Deletion 3 HET FN1746-S Chr10 9557998 C-T 0 0 Single Base Substitution 0 HET FN1746-S Chr10 9840475 Chr9 665643 0 Translocation 0 LOC_Os10g19310 transposon protein, putative, CACTA, En/Spm sub-class FN1746-S Chr11 10814760 Chr8 22529967 0 Translocation 0 FN1746-S Chr11 12047036 12047260 0 0 Inversion 0 FN1746-S Chr11 13888254 13888465 0 0 Inversion 0 FN1746-S Chr11 19832414 Chr10 10710616 0 Translocation 0 FN1746-S Chr11 20511938 C-G 0 0 Single Base Substitution 0 HET FN1746-S Chr11 23564170 23564310 0 0 Inversion 0 FN1746-S Chr11 24802358 24802359 0 0 Deletion 1 Homo FN1746-S Chr11 24888643 24889060 0 0 Inversion 0 LOC_Os11g41490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1746-S Chr11 3501431 3501905 0 0 Inversion 0 FN1746-S Chr12 11627402 C-G 0 0 Single Base Substitution 0 HET FN1746-S Chr12 17303309 17303699 0 0 Inversion 0 LOC_Os12g29220 nodulin MtN3 family protein, putative, expressed FN1746-S Chr12 1751157 T-G 0 0 Single Base Substitution 0 Homo FN1746-S Chr12 1764713 1764930 0 0 Inversion 0 FN1746-S Chr12 20907697 20907703 0 0 Deletion 6 HET FN1746-S Chr12 21105677 21105679 0 0 Deletion 2 HET FN1746-S Chr12 24014837 24015080 0 0 Inversion 0 FN1746-S Chr12 4019824 4019826 0 0 Deletion 2 HET FN1746-S Chr12 4820680 Chr6 4274541 0 Translocation 0 FN1746-S Chr12 7625510 T-C 0 0 Single Base Substitution 0 HET FN1746-S Chr2 10263256 10263586 0 0 Inversion 0 LOC_Os02g17760 cytochrome P450, putative, expressed FN1746-S Chr2 10359107 10359401 0 0 Inversion 0 FN1746-S Chr2 11291697 C-T 0 0 Single Base Substitution 0 HET FN1746-S Chr2 14045315 A-G 0 0 Single Base Substitution 0 HET FN1746-S Chr2 14247782 14247783 0 0 Deletion 1 frameshift_variant HET LOC_Os02g24586 uncharacterized protein ycf68, putative, expressed FN1746-S Chr2 14459775 G-A 0 0 Single Base Substitution 0 HET FN1746-S Chr2 14629954 14630070 0 0 Inversion 0 LOC_Os02g25160 retrotransposon, putative, centromere-specific, expressed FN1746-S Chr2 21529975 21530271 0 0 Inversion 0 LOC_Os02g35840 expressed protein FN1746-S Chr2 25256543 25256872 0 0 Inversion 0 FN1746-S Chr2 28969146 28969529 0 0 Inversion 0 LOC_Os02g47440 syntaxin, putative, expressed FN1746-S Chr2 29113648 29113996 0 0 Inversion 0 LOC_Os02g47650 universal stress protein domain containing protein, putative, expressed FN1746-S Chr2 294985 A-T 0 0 Single Base Substitution 0 Homo FN1746-S Chr2 3302893 3303155 0 0 Inversion 0 LOC_Os02g06584 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed FN1746-S Chr2 7654663 7654940 0 0 Inversion 0 LOC_Os02g14020 expressed protein FN1746-S Chr2 8440486 8440721 0 0 Inversion 0 FN1746-S Chr2 8554102 8554209 0 0 Inversion 0 LOC_Os02g15310 RNA recognition motif containing protein, expressed FN1746-S Chr3 13003211 13003820 0 0 Inversion 0 FN1746-S Chr3 13197098 G-A 0 0 Single Base Substitution 0 Homo FN1746-S Chr3 1667038 1667217 0 0 Inversion 0 FN1746-S Chr3 1770982 1771136 0 0 Inversion 0 FN1746-S Chr3 18954935 18954938 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os03g33130 retrotransposon protein, putative, Ty3-gypsy subclass FN1746-S Chr3 19608029 19608165 0 0 Inversion 0 FN1746-S Chr3 25397205 G-A 0 0 Single Base Substitution 0 Homo FN1746-S Chr3 27416184 27416299 0 0 Inversion 0 LOC_Os03g48180 peptide transporter PTR2, putative, expressed FN1746-S Chr3 28515307 28515683 0 0 Inversion 0 FN1746-S Chr3 29277561 29277739 0 0 Inversion 0 LOC_Os03g51160 fb27, putative, expressed FN1746-S Chr3 30621736 30621918 0 0 Inversion 0 FN1746-S Chr3 3842196 3842325 0 0 Inversion 0 FN1746-S Chr3 9217096 9217431 0 0 Inversion 0 LOC_Os03g16680 hypothetical protein FN1746-S Chr4 11342552 11342908 0 0 Inversion 0 FN1746-S Chr4 1201556 1201772 0 0 Inversion 0 LOC_Os04g02970 subtilisin-like protease precursor, putative, expressed FN1746-S Chr4 12747791 12747997 0 0 Inversion 0 FN1746-S Chr4 22008325 22008506 0 0 Inversion 0 LOC_Os04g36054 auxin response factor 9, putative, expressed FN1746-S Chr4 23859513 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g40070 GRAM and C2 domains containing protein, putative, expressed FN1746-S Chr4 25605032 G-A 0 0 Single Base Substitution 0 HET FN1746-S Chr4 25849786 25850139 0 0 Inversion 0 FN1746-S Chr4 30303060 30303312 0 0 Inversion 0 LOC_Os04g51172 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed FN1746-S Chr4 5418157 G-A 0 0 Single Base Substitution 0 HET FN1746-S Chr4 7898054 7898059 0 0 Deletion 5 HET FN1746-S Chr5 17723987 C-G 0 0 Single Base Substitution 0 HET FN1746-S Chr5 19571537 19571845 0 0 Inversion 0 FN1746-S Chr5 21555128 21555322 0 0 Inversion 0 FN1746-S Chr5 25587365 25587793 0 0 Inversion 0 FN1746-S Chr5 26765297 26765545 0 0 Inversion 0 FN1746-S Chr5 2885517 2885816 0 0 Inversion 0 LOC_Os05g05790 double-stranded RNA binding motif containing protein, expressed FN1746-S Chr5 5910611 5910755 0 0 Inversion 0 LOC_Os05g10730 ABC transporter, ATP-binding protein, putative, expressed FN1746-S Chr5 8602211 8602602 0 0 Inversion 0 LOC_Os05g15160 phosphate/phosphate translocator, putative, expressed FN1746-S Chr5 985855 986120 0 0 Inversion 0 FN1746-S Chr6 11398099 11398273 0 0 Inversion 0 LOC_Os06g19920 retrotransposon protein, putative, Ty1-copia subclass, expressed FN1746-S Chr6 11647912 11647913 0 0 Deletion 1 HET FN1746-S Chr6 1483366 Chr1 3192780 0 Translocation 0 LOC_Os06g03750 dehydration response related protein, putative, expressed FN1746-S Chr6 16110534 A-G 0 0 Single Base Substitution 0 HET FN1746-S Chr6 16202869 16203033 0 0 Inversion 0 FN1746-S Chr6 16900476 16900667 0 0 Inversion 0 FN1746-S Chr6 21950535 Chr1 13413514 0 Translocation 0 FN1746-S Chr6 26355291 26355732 0 0 Inversion 0 FN1746-S Chr6 26355291 26355732 0 0 Inversion 0 LOC_Os06g43780 expressed protein FN1746-S Chr6 31071632 31071756 0 0 Inversion 0 LOC_Os06g51310 PAZ domain containing protein, putative, expressed FN1746-S Chr6 4568915 4568981 0 0 Insertion 66 HET FN1746-S Chr6 5734302 5734553 0 0 Inversion 0 LOC_Os06g10980 xyloglucan fucosyltransferase, putative, expressed FN1746-S Chr6 6064816 6064972 0 0 Inversion 0 FN1746-S Chr6 6570671 6570970 0 0 Inversion 0 FN1746-S Chr6 6570671 6570970 0 0 Inversion 0 LOC_Os06g12230 TCP-domain protein, putative, expressed FN1746-S Chr6 8257809 A-G 0 0 Single Base Substitution 0 Homo FN1746-S Chr7 11903183 11903537 0 0 Inversion 0 FN1746-S Chr7 11903183 11903537 0 0 Inversion 0 LOC_Os07g20590 retrotransposon, putative, centromere-specific FN1746-S Chr7 16229839 16230017 0 0 Inversion 0 LOC_Os07g27810 fiber protein Fb34, putative, expressed FN1746-S Chr7 16450799 16451131 0 0 Inversion 0 FN1746-S Chr7 1862730 1862967 0 0 Inversion 0 LOC_Os07g04240 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed FN1746-S Chr7 21245810 21246210 0 0 Inversion 0 LOC_Os07g35520 glucan endo-1,3-beta-glucosidase precursor, putative, expressed FN1746-S Chr7 21830618 21830748 0 0 Inversion 0 LOC_Os07g36510 expressed protein FN1746-S Chr7 22220742 22220986 0 0 Inversion 0 FN1746-S Chr7 23001127 23001268 0 0 Inversion 0 LOC_Os07g38290 plastocyanin-like domain containing protein, putative, expressed FN1746-S Chr7 23949412 23949642 0 0 Inversion 0 LOC_Os07g39920 formin, putative, expressed FN1746-S Chr7 24730691 24731013 0 0 Inversion 0 FN1746-S Chr7 25663296 25663557 0 0 Inversion 0 LOC_Os07g42860 cyclin, putative, expressed FN1746-S Chr7 370779 371119 0 0 Inversion 0 FN1746-S Chr7 5490354 C-T 0 0 Single Base Substitution 0 Homo FN1746-S Chr7 6992353 6992780 0 0 Inversion 0 FN1746-S Chr8 16259496 Chr4 19019713 0 Translocation 0 FN1746-S Chr8 1688204 1688543 0 0 Inversion 0 LOC_Os08g03610 LSD1 zinc finger domain containing protein, expressed FN1746-S Chr8 20776390 20776557 0 0 Inversion 0 LOC_Os08g33320 expressed protein FN1746-S Chr8 21804771 21804984 0 0 Inversion 0 FN1746-S Chr8 24424482 T-C 0 0 Single Base Substitution 0 Homo FN1746-S Chr8 3260257 3260268 0 0 Deletion 11 HET FN1746-S Chr8 442577 G-T 0 0 Single Base Substitution 0 HET FN1746-S Chr8 5018954 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g08670 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1746-S Chr9 14141269 14141272 0 0 Deletion 3 Homo FN1746-S Chr9 17348710 17349074 0 0 Inversion 0 FN1746-S Chr9 17564219 17564461 0 0 Inversion 0 FN1746-S Chr9 18125124 18125366 0 0 Inversion 0 FN1746-S Chr9 20193896 20194175 0 0 Inversion 0 FN1746-S Chr9 2055218 2055219 0 0 Deletion 1 HET FN1746-S Chr9 21424037 G-A 0 0 Single Base Substitution 0 Homo FN1746-S Chr9 3358350 3358461 0 0 Inversion 0 FN1746-S Chr9 6539625 6539782 0 0 Inversion 0 LOC_Os09g11720 expressed protein