FN1759-S Chr1 21765491 G-C 0 0 Single Base Substitution 0 HET FN1759-S Chr1 22566001 22592000 0 0 Deletion 25999 LOC_Os01g40010 retrotransposon protein, putative, unclassified, expressed FN1759-S Chr1 22566001 22592000 0 0 Deletion 25999 LOC_Os01g40020 expressed protein FN1759-S Chr1 22566001 22592000 0 0 Deletion 25999 LOC_Os01g40030 expressed protein FN1759-S Chr1 22566001 22592000 0 0 Deletion 25999 LOC_Os01g40040 expressed protein FN1759-S Chr1 22566001 22592000 0 0 Deletion 25999 LOC_Os01g40050 peptidyl-prolyl cis-trans isomerase, putative, expressed FN1759-S Chr1 24427208 24427210 0 0 Insertion 2 HET FN1759-S Chr1 29479117 29479119 0 0 Deletion 2 HET FN1759-S Chr1 34189988 A-C 0 0 Single Base Substitution 0 Homo FN1759-S Chr1 4375184 G-A 0 0 Single Base Substitution 0 Homo FN1759-S Chr10 13779123 13779125 0 0 Insertion 2 HET FN1759-S Chr10 15120558 15120559 0 0 Deletion 1 frameshift_variant HET LOC_Os10g29010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1759-S Chr10 19755796 T-C 0 0 Single Base Substitution 0 Homo FN1759-S Chr10 22275685 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g41440 KH domain containing protein, putative, expressed FN1759-S Chr10 9573390 C-T 0 0 Single Base Substitution 0 Homo FN1759-S Chr10 9573391 C-T 0 0 Single Base Substitution 0 Homo FN1759-S Chr11 11442832 G-T 0 0 Single Base Substitution 0 HET FN1759-S Chr11 17402989 17402990 0 0 Deletion 1 HET FN1759-S Chr11 17620583 17621014 0 0 Inversion 0 FN1759-S Chr11 23637084 23637085 0 0 Insertion 1 HET FN1759-S Chr11 2498120 G-T 0 0 Single Base Substitution 0 HET FN1759-S Chr11 7242274 7242327 0 0 Deletion 53 HET FN1759-S Chr11 9040952 G-A 0 0 Single Base Substitution 0 HET FN1759-S Chr11 9543001 9580000 0 0 Deletion 36999 LOC_Os11g17180 retrotransposon protein, putative, unclassified FN1759-S Chr11 9543001 9580000 0 0 Deletion 36999 LOC_Os11g17190 transposon protein, putative, CACTA, En/Spm sub-class FN1759-S Chr11 9586001 9610000 0 0 Deletion 23999 LOC_Os11g17220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1759-S Chr11 9586001 9610000 0 0 Deletion 23999 LOC_Os11g17230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1759-S Chr11 9586001 9610000 0 0 Deletion 23999 LOC_Os11g17240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1759-S Chr11 9586001 9610000 0 0 Deletion 23999 LOC_Os11g17250 retrotransposon protein, putative, Ty3-gypsy subclass FN1759-S Chr11 9629001 9686000 0 0 Deletion 56999 LOC_Os11g17290 expressed protein FN1759-S Chr11 9629001 9686000 0 0 Deletion 56999 LOC_Os11g17300 transposon protein, putative, unclassified, expressed FN1759-S Chr11 9629001 9686000 0 0 Deletion 56999 LOC_Os11g17310 retrotransposon protein, putative, unclassified, expressed FN1759-S Chr11 9629001 9686000 0 0 Deletion 56999 LOC_Os11g17320 hypothetical protein FN1759-S Chr11 9629001 9686000 0 0 Deletion 56999 LOC_Os11g17330 stripe rust resistance protein Yr10, putative, expressed FN1759-S Chr11 9629001 9686000 0 0 Deletion 56999 LOC_Os11g17340 expressed protein FN1759-S Chr11 9629001 9686000 0 0 Deletion 56999 LOC_Os11g17350 expressed protein FN1759-S Chr11 9629001 9686000 0 0 Deletion 56999 LOC_Os11g17360 expressed protein FN1759-S Chr11 9629001 9686000 0 0 Deletion 56999 LOC_Os11g17370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1759-S Chr12 16318893 16318897 0 0 Deletion 4 Homo FN1759-S Chr12 17115290 17115291 0 0 Insertion 1 HET FN1759-S Chr12 26444643 T-G 0 0 Single Base Substitution 0 HET FN1759-S Chr12 5142444 5142447 0 0 Deletion 3 Homo FN1759-S Chr2 16792158 Chr1 25633820 0 Translocation 0 LOC_Os01g45174 transposon protein, putative, unclassified, expressed FN1759-S Chr2 16792158 Chr1 25633820 0 Translocation 0 LOC_Os02g28400 retrotransposon protein, putative, unclassified, expressed FN1759-S Chr2 23757626 A-C 0 0 Single Base Substitution 0 Homo FN1759-S Chr2 2827735 C-T 0 0 Single Base Substitution 0 HET FN1759-S Chr2 28286475 A-C 0 0 Single Base Substitution 0 HET FN1759-S Chr2 32367690 32367924 0 0 Inversion 0 FN1759-S Chr2 35105664 35105667 0 0 Insertion 3 HET FN1759-S Chr2 379397 379398 0 0 Insertion 1 HET FN1759-S Chr2 9948515 C-G 0 0 Single Base Substitution 0 HET FN1759-S Chr3 14126142 14126143 0 0 Insertion 1 HET FN1759-S Chr3 17932700 C-T 0 0 Single Base Substitution 0 HET FN1759-S Chr3 30863151 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g53810 retrotransposon protein, putative, unclassified, expressed FN1759-S Chr3 7442863 7442864 0 0 Deletion 1 Homo FN1759-S Chr4 11221577 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g20140 retrotransposon, putative, centromere-specific, expressed FN1759-S Chr4 13171073 Chr1 8783372 0 Translocation 0 FN1759-S Chr4 13752198 A-C 0 0 Single Base Substitution 0 Homo FN1759-S Chr4 15293681 15293689 0 0 Deletion 8 Homo FN1759-S Chr4 25062725 25063012 0 0 Inversion 0 LOC_Os04g42360 expressed protein FN1759-S Chr4 8504916 8504920 0 0 Deletion 4 Homo FN1759-S Chr5 1091001 1114000 0 0 Deletion 22999 LOC_Os05g02950 retrotransposon protein, putative, unclassified, expressed FN1759-S Chr5 1091001 1114000 0 0 Deletion 22999 LOC_Os05g02960 retrotransposon protein, putative, unclassified, expressed FN1759-S Chr5 1091001 1114000 0 0 Deletion 22999 LOC_Os05g02970 expressed protein FN1759-S Chr5 1091001 1114000 0 0 Deletion 22999 LOC_Os05g02980 expressed protein FN1759-S Chr5 12814839 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g22560 retrotransposon protein, putative, unclassified, expressed FN1759-S Chr5 15739566 15739567 0 0 Deletion 1 HET FN1759-S Chr5 19167931 19167934 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os05g32730 tetratricopeptide-like helical, putative, expressed FN1759-S Chr6 17363233 G-T 0 0 Single Base Substitution 0 HET FN1759-S Chr6 25706396 A-T 0 0 Single Base Substitution 0 Homo FN1759-S Chr6 27259341 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g45050 clathrin assembly protein, putative, expressed FN1759-S Chr6 27259342 G-A 0 0 Single Base Substitution 0 Homo FN1759-S Chr7 11202939 G-A 0 0 Single Base Substitution 0 Homo FN1759-S Chr7 14314103 G-C 0 0 Single Base Substitution 0 HET FN1759-S Chr7 9705533 9705534 0 0 Insertion 1 HET FN1759-S Chr8 19843003 C-T 0 0 Single Base Substitution 0 HET FN1759-S Chr8 2560912 2560913 0 0 Deletion 1 frameshift_variant HET LOC_Os08g04990 retrotransposon protein, putative, unclassified, expressed FN1759-S Chr8 471296 471555 0 0 Inversion 0 LOC_Os08g01780 OsIAA25 - Auxin-responsive Aux/IAA gene family member, expressed FN1759-S Chr8 6740523 A-T 0 0 Single Base Substitution 0 HET FN1759-S Chr9 1762998 Chr4 29790489 0 Translocation 0