FN1761-S Chr1 10798045 10798046 0 0 Deletion 1 HET FN1761-S Chr1 20282606 T-A 0 0 Single Base Substitution 0 Homo FN1761-S Chr1 20938947 G-T 0 0 Single Base Substitution 0 Homo FN1761-S Chr1 28664344 T-A 0 0 Single Base Substitution 0 Homo FN1761-S Chr1 33467625 C-G 0 0 Single Base Substitution 0 HET FN1761-S Chr10 1802770 1802771 0 0 Deletion 1 HET FN1761-S Chr10 20074557 A-T 0 0 Single Base Substitution 0 Homo FN1761-S Chr11 13390417 A-G 0 0 Single Base Substitution 0 Homo FN1761-S Chr11 15134468 15134469 0 0 Insertion 1 HET FN1761-S Chr12 12612891 G-T 0 0 Single Base Substitution 0 HET FN1761-S Chr12 13221775 T-C 0 0 Single Base Substitution 0 HET FN1761-S Chr12 13563755 13563756 0 0 Insertion 1 HET FN1761-S Chr12 14916489 14916490 0 0 Deletion 1 frameshift_variant HET LOC_Os12g25720 expressed protein FN1761-S Chr12 21569945 G-A 0 0 Single Base Substitution 0 HET FN1761-S Chr12 5902871 Chr3 24413754 0 Translocation 0 FN1761-S Chr2 11338698 G-C 0 0 Single Base Substitution 0 Homo FN1761-S Chr2 19248589 T-C 0 0 Single Base Substitution 0 Homo FN1761-S Chr2 2633762 2633764 0 0 Deletion 2 HET FN1761-S Chr2 28825581 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g47220 CPuORF20 - conserved peptide uORF-containing transcript, expressed FN1761-S Chr2 6393962 6393965 0 0 Insertion 3 HET FN1761-S Chr3 13559330 C-T 0 0 Single Base Substitution 0 Homo FN1761-S Chr3 22619841 T-G 0 0 Single Base Substitution 0 HET FN1761-S Chr3 24734812 G-A 0 0 Single Base Substitution 0 HET FN1761-S Chr3 27903072 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g48990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1761-S Chr3 34439027 C-T 0 0 Single Base Substitution 0 HET FN1761-S Chr3 34439033 C-T 0 0 Single Base Substitution 0 HET FN1761-S Chr4 14572693 T-C 0 0 Single Base Substitution 0 HET FN1761-S Chr4 15147584 15147585 0 0 Insertion 1 HET FN1761-S Chr4 9968190 Chr1 18234570 0 Translocation 0 LOC_Os01g33120 retrotransposon, putative, centromere-specific, expressed FN1761-S Chr4 9968190 Chr1 18234570 0 Translocation 0 LOC_Os04g18040 retrotransposon protein, putative, unclassified FN1761-S Chr5 1114546 T-A 0 0 Single Base Substitution 0 Homo FN1761-S Chr5 3079607 A-T 0 0 Single Base Substitution 0 Homo FN1761-S Chr6 10932697 Chr3 23077806 0 Translocation 0 LOC_Os06g19210 cadmium tolerance factor, putative, expressed FN1761-S Chr6 10932794 Chr3 23077707 0 Translocation 0 LOC_Os06g19210 cadmium tolerance factor, putative, expressed FN1761-S Chr6 14174001 14188000 0 0 Deletion 13999 LOC_Os06g24200 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1761-S Chr6 14174001 14188000 0 0 Deletion 13999 LOC_Os06g24210 expressed protein FN1761-S Chr6 14174001 14188000 0 0 Deletion 13999 LOC_Os06g24220 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1761-S Chr6 14174001 14188000 0 0 Deletion 13999 LOC_Os06g24230 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1761-S Chr6 14190001 14255000 0 0 Deletion 64999 LOC_Os06g24240 expressed protein FN1761-S Chr6 14190001 14255000 0 0 Deletion 64999 LOC_Os06g24250 expressed protein FN1761-S Chr6 14190001 14255000 0 0 Deletion 64999 LOC_Os06g24260 expressed protein FN1761-S Chr6 14190001 14255000 0 0 Deletion 64999 LOC_Os06g24270 retrotransposon protein, putative, unclassified, expressed FN1761-S Chr6 14190001 14255000 0 0 Deletion 64999 LOC_Os06g24280 retrotransposon protein, putative, unclassified, expressed FN1761-S Chr6 14190001 14255000 0 0 Deletion 64999 LOC_Os06g24290 SCP-like extracellular protein, expressed FN1761-S Chr6 14190001 14255000 0 0 Deletion 64999 LOC_Os06g24300 hypothetical protein FN1761-S Chr6 14190001 14255000 0 0 Deletion 64999 LOC_Os06g24310 retrotransposon protein, putative, unclassified, expressed FN1761-S Chr6 14190001 14255000 0 0 Deletion 64999 LOC_Os06g24320 transposon protein, putative, unclassified FN1761-S Chr6 14190001 14255000 0 0 Deletion 64999 LOC_Os06g24350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25590 expressed protein FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25600 hypothetical protein FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25605 expressed protein FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25610 transposon protein, putative, unclassified, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25620 retrotransposon protein, putative, Ty3-gypsy subclass FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25630 retrotransposon protein, putative, unclassified, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25640 retrotransposon protein, putative, unclassified FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25650 retrotransposon protein, putative, Ty3-gypsy subclass FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25660 transposon protein, putative, unclassified, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25670 expressed protein FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25680 transposon protein, putative, CACTA, En/Spm sub-class FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25690 retrotransposon protein, putative, unclassified, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25700 retrotransposon protein, putative, unclassified, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25710 retrotransposon protein, putative, unclassified, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25720 transposon protein, putative, CACTA, En/Spm sub-class FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25730 retrotransposon protein, putative, unclassified, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25740 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25750 retrotransposon protein, putative, Ty3-gypsy subclass FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25790 retrotransposon protein, putative, Ty3-gypsy subclass FN1761-S Chr6 14966001 15076000 0 0 Deletion 109999 LOC_Os06g25800 retrotransposon protein, putative, unclassified, expressed FN1761-S Chr6 19758230 A-G 0 0 Single Base Substitution 0 HET FN1761-S Chr6 4337561 G-A 0 0 Single Base Substitution 0 HET FN1761-S Chr6 4738560 4738562 0 0 Insertion 2 HET FN1761-S Chr6 6141558 6141559 0 0 Deletion 1 Homo FN1761-S Chr7 12182670 12182671 0 0 Deletion 1 HET FN1761-S Chr7 1533594 C-T 0 0 Single Base Substitution 0 HET FN1761-S Chr7 17051582 17051584 0 0 Insertion 2 HET FN1761-S Chr7 1969174 1969176 0 0 Insertion 2 HET FN1761-S Chr7 20923497 C-T 0 0 Single Base Substitution 0 Homo FN1761-S Chr7 23408491 Chr4 22035009 0 Translocation 0 LOC_Os07g39040 expressed protein FN1761-S Chr7 24204869 T-G 0 0 Single Base Substitution 0 HET FN1761-S Chr7 25927428 G-A 0 0 Single Base Substitution 0 HET FN1761-S Chr7 8020454 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g14060 retrotransposon protein, putative, unclassified, expressed FN1761-S Chr8 13333994 13334002 0 0 Deletion 8 frameshift_variant HET LOC_Os08g22080 retrotransposon, putative, centromere-specific FN1761-S Chr8 13342478 13342484 0 0 Deletion 6 disruptive_inframe_deletion HET LOC_Os08g22110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN1761-S Chr8 24077240 Chr2 25044700 0 Translocation 0 FN1761-S Chr8 5337766 5337767 0 0 Deletion 1 HET FN1761-S Chr9 21252569 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g36850 expressed protein FN1761-S Chr9 21767780 C-T 0 0 Single Base Substitution 0 HET FN1761-S Chr9 22161503 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g38520 DOMON domain containing protein, expressed FN1761-S Chr9 22161505 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g38520 DOMON domain containing protein, expressed