FN2082-S Chr1 15482019 15482272 0 0 Inversion 0 LOC_Os01g27750 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed FN2082-S Chr1 17132835 G-T 0 0 Single Base Substitution 0 HET FN2082-S Chr1 17377836 G-A 0 0 Single Base Substitution 0 HET FN2082-S Chr1 20358027 20358353 0 0 Inversion 0 LOC_Os01g36670 expressed protein FN2082-S Chr1 22180356 22180358 0 0 Insertion 2 HET FN2082-S Chr1 24585922 24586058 0 0 Inversion 0 LOC_Os01g43100 protein phosphatase 2C, putative, expressed FN2082-S Chr1 25675320 25675665 0 0 Inversion 0 FN2082-S Chr1 2591911 2592137 0 0 Inversion 0 LOC_Os01g05490 triosephosphate isomerase, cytosolic, putative, expressed FN2082-S Chr1 28314760 28314893 0 0 Inversion 0 LOC_Os01g49250 methyltransferase, putative, expressed FN2082-S Chr1 32656915 32657121 0 0 Inversion 0 LOC_Os01g56610 homocysteine S-methyltransferase protein, putative, expressed FN2082-S Chr1 32930536 32930743 0 0 Inversion 0 LOC_Os01g56990 Regulator of chromosome condensation domain containing protein, expressed FN2082-S Chr1 33904209 33904339 0 0 Inversion 0 LOC_Os01g58640 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed FN2082-S Chr1 34463627 34463865 0 0 Inversion 0 LOC_Os01g59580 retrotransposon protein, putative, unclassified, expressed FN2082-S Chr1 34669086 34669214 0 0 Inversion 0 FN2082-S Chr1 35479751 35480187 0 0 Inversion 0 FN2082-S Chr1 35479751 35480187 0 0 Inversion 0 LOC_Os01g61330 ankyrin homolog precursor, putative, expressed FN2082-S Chr1 3938259 G-A 0 0 Single Base Substitution 0 HET FN2082-S Chr1 40124780 40124787 0 0 Deletion 7 Homo FN2082-S Chr1 42279521 C-T 0 0 Single Base Substitution 0 HET FN2082-S Chr1 5120876 5120990 0 0 Inversion 0 FN2082-S Chr1 625030 625032 0 0 Deletion 2 HET FN2082-S Chr10 13445495 13445652 0 0 Inversion 0 FN2082-S Chr10 13445926 13446130 0 0 Inversion 0 FN2082-S Chr10 14554336 14554503 0 0 Inversion 0 LOC_Os10g28040 histone acetyltransferase GCN5, putative, expressed FN2082-S Chr10 19527548 19527680 0 0 Inversion 0 LOC_Os10g36480 expressed protein FN2082-S Chr10 20288139 20288314 0 0 Inversion 0 FN2082-S Chr10 21658659 21658949 0 0 Inversion 0 LOC_Os10g40430 LTPL139 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN2082-S Chr10 23027001 23036000 0 0 Deletion 8999 LOC_Os10g42690 jmjC domain containing protein, expressed FN2082-S Chr10 23027001 23036000 0 0 Deletion 8999 LOC_Os10g42700 CS domain containing protein, putative, expressed FN2082-S Chr10 23027001 23036000 0 0 Deletion 8999 LOC_Os10g42710 RCD1, putative, expressed FN2082-S Chr10 23090364 23090761 0 0 Inversion 0 LOC_Os10g42820 early-responsive to dehydration protein-related, putative, expressed FN2082-S Chr10 5011897 G-C 0 0 Single Base Substitution 0 Homo FN2082-S Chr10 5276765 5276981 0 0 Inversion 0 FN2082-S Chr10 6509157 6509518 0 0 Inversion 0 LOC_Os10g11750 LTPL89 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN2082-S Chr11 10068383 10068641 0 0 Inversion 0 LOC_Os11g17930 expressed protein FN2082-S Chr11 10304413 10304414 0 0 Deletion 1 frameshift_variant HET LOC_Os11g18290 retrotransposon protein, putative, unclassified, expressed FN2082-S Chr11 10878140 T-A 0 0 Single Base Substitution 0 HET FN2082-S Chr11 10878142 T-A 0 0 Single Base Substitution 0 HET FN2082-S Chr11 14198643 C-T 0 0 Single Base Substitution 0 HET FN2082-S Chr11 14507601 14507976 0 0 Inversion 0 FN2082-S Chr11 16278074 16278346 0 0 Inversion 0 LOC_Os11g28300 uncharacterized protein family UPF0016 domain containing protein, expressed FN2082-S Chr11 19301208 G-A 0 0 Single Base Substitution 0 HET FN2082-S Chr11 20762298 20762399 0 0 Inversion 0 LOC_Os11g35430 csAtPR5, putative, expressed FN2082-S Chr11 23252627 23252788 0 0 Inversion 0 FN2082-S Chr11 2523732 2523736 0 0 Deletion 4 HET FN2082-S Chr11 27840603 Chr8 12265045 0 Translocation 0 FN2082-S Chr11 5095874 5472681 0 0 Inversion 0 FN2082-S Chr11 5095902 5472691 0 0 Inversion 0 FN2082-S Chr11 5569346 G-A 0 0 Single Base Substitution 0 HET FN2082-S Chr11 8860276 8860478 0 0 Inversion 0 FN2082-S Chr11 9850285 G-A 0 0 Single Base Substitution 0 HET FN2082-S Chr11 9850286 C-A 0 0 Single Base Substitution 0 HET FN2082-S Chr12 18016071 18016561 0 0 Inversion 0 FN2082-S Chr12 23114732 23114935 0 0 Inversion 0 FN2082-S Chr12 23934068 24801673 0 0 Inversion 0 LOC_Os12g38920 heparanase-like protein precursor, putative, expressed FN2082-S Chr12 23934078 24883817 0 0 Inversion 0 LOC_Os12g38920 heparanase-like protein precursor, putative, expressed FN2082-S Chr12 23934078 24883817 0 0 Inversion 0 LOC_Os12g40200 expressed protein FN2082-S Chr12 24801001 24881000 0 0 Deletion 79999 LOC_Os12g40115 expressed protein FN2082-S Chr12 24801001 24881000 0 0 Deletion 79999 LOC_Os12g40120 B3 DNA binding domain containing protein, expressed FN2082-S Chr12 24801001 24881000 0 0 Deletion 79999 LOC_Os12g40130 phosphoribosyl transferase, putative, expressed FN2082-S Chr12 24801001 24881000 0 0 Deletion 79999 LOC_Os12g40140 OsFBX457 - F-box domain containing protein, expressed FN2082-S Chr12 24801001 24881000 0 0 Deletion 79999 LOC_Os12g40150 expressed protein FN2082-S Chr12 24801001 24881000 0 0 Deletion 79999 LOC_Os12g40160 expressed protein FN2082-S Chr12 24801001 24881000 0 0 Deletion 79999 LOC_Os12g40170 hypothetical protein FN2082-S Chr12 24801001 24881000 0 0 Deletion 79999 LOC_Os12g40180 expressed protein FN2082-S Chr12 24801001 24881000 0 0 Deletion 79999 LOC_Os12g40190 G-protein alpha subunit, putative, expressed FN2082-S Chr12 24882883 24883179 0 0 Inversion 0 LOC_Os12g40200 expressed protein FN2082-S Chr12 3482270 G-A 0 0 Single Base Substitution 0 Homo FN2082-S Chr12 7539872 7540133 0 0 Inversion 0 LOC_Os12g13450 retrotransposon protein, putative, unclassified, expressed FN2082-S Chr12 8514016 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g14870 expressed protein FN2082-S Chr2 10183452 10184021 0 0 Inversion 0 LOC_Os02g17680 ethylene-responsive protein related, putative, expressed FN2082-S Chr2 1101280 1101469 0 0 Inversion 0 FN2082-S Chr2 18664859 18665023 0 0 Inversion 0 FN2082-S Chr2 18802266 G-T 0 0 Single Base Substitution 0 HET FN2082-S Chr2 20394617 20394783 0 0 Inversion 0 FN2082-S Chr2 21773845 21774052 0 0 Inversion 0 FN2082-S Chr2 22261056 22261408 0 0 Inversion 0 FN2082-S Chr2 22411001 C-T 0 0 Single Base Substitution 0 HET FN2082-S Chr2 25688594 A-G 0 0 Single Base Substitution 0 HET FN2082-S Chr2 27733679 27733790 0 0 Inversion 0 FN2082-S Chr2 28734129 28734293 0 0 Inversion 0 FN2082-S Chr2 28820512 28820649 0 0 Inversion 0 FN2082-S Chr2 29191736 29192147 0 0 Inversion 0 LOC_Os02g47744 MYB family transcription factor, putative, expressed FN2082-S Chr2 35729520 35729724 0 0 Inversion 0 LOC_Os02g58410 expressed protein FN2082-S Chr2 5279569 A-T 0 0 Single Base Substitution 0 HET FN2082-S Chr2 6470032 6470541 0 0 Inversion 0 LOC_Os02g12400 receptor-like protein kinase precursor, putative, expressed FN2082-S Chr2 6562667 C-T 0 0 Single Base Substitution 0 HET FN2082-S Chr2 7082503 7082980 0 0 Inversion 0 FN2082-S Chr3 15864324 15864515 0 0 Inversion 0 LOC_Os03g27680 conserved hypothetical protein FN2082-S Chr3 16659857 16660170 0 0 Inversion 0 FN2082-S Chr3 20708488 20708811 0 0 Inversion 0 LOC_Os03g37360 expressed protein FN2082-S Chr3 21619985 21620201 0 0 Inversion 0 LOC_Os03g38920 expressed protein FN2082-S Chr3 23608246 23608438 0 0 Inversion 0 FN2082-S Chr3 24642826 24643126 0 0 Inversion 0 FN2082-S Chr3 2537465 2537908 0 0 Inversion 0 FN2082-S Chr3 27418578 27418992 0 0 Inversion 0 LOC_Os03g48180 peptide transporter PTR2, putative, expressed FN2082-S Chr3 33009203 33009348 0 0 Inversion 0 FN2082-S Chr3 33067798 33067941 0 0 Inversion 0 LOC_Os03g58080 BT1 family protein, putative, expressed FN2082-S Chr3 34329303 34329542 0 0 Inversion 0 LOC_Os03g60360 protein kinase PKN/PRK1, effector, putative, expressed FN2082-S Chr3 35736033 35736345 0 0 Inversion 0 FN2082-S Chr3 35736033 35736345 0 0 Inversion 0 LOC_Os03g63250 brefeldin A-sensitive Golgi protein-like, putative, expressed FN2082-S Chr3 35909505 35909702 0 0 Inversion 0 LOC_Os03g63590 metallo-beta-lactamase, putative, expressed FN2082-S Chr3 552155 552329 0 0 Inversion 0 LOC_Os03g01890 START domain containing protein, expressed FN2082-S Chr3 6292378 6292685 0 0 Inversion 0 LOC_Os03g12010 expressed protein FN2082-S Chr3 6540815 6541046 0 0 Inversion 0 LOC_Os03g12370 HSF-type DNA-binding domain containing protein, expressed FN2082-S Chr3 7615597 C-T 0 0 Single Base Substitution 0 HET FN2082-S Chr3 8597245 8597396 0 0 Inversion 0 FN2082-S Chr3 8597245 8597396 0 0 Inversion 0 LOC_Os03g15590 eukaryotic translation initiation factor, putative, expressed FN2082-S Chr3 963105 963429 0 0 Inversion 0 FN2082-S Chr4 12529775 12530285 0 0 Inversion 0 LOC_Os04g22110 retrotransposon protein, putative, unclassified, expressed FN2082-S Chr4 20661864 20662177 0 0 Inversion 0 FN2082-S Chr4 2460818 2461243 0 0 Inversion 0 FN2082-S Chr4 29380342 A-T 0 0 Single Base Substitution 0 Homo FN2082-S Chr4 32827009 32827241 0 0 Inversion 0 LOC_Os04g55220 C2 domain containing protein, expressed FN2082-S Chr4 3283468 3283614 0 0 Inversion 0 FN2082-S Chr4 34068276 34068452 0 0 Inversion 0 LOC_Os04g57180 flavonol synthase/flavanone 3-hydroxylase, putative, expressed FN2082-S Chr4 34431836 34432075 0 0 Inversion 0 FN2082-S Chr4 7177307 7177497 0 0 Inversion 0 FN2082-S Chr5 11163452 A-G 0 0 Single Base Substitution 0 Homo FN2082-S Chr5 1501140 1501387 0 0 Inversion 0 LOC_Os05g03550 MYB family transcription factor, putative, expressed FN2082-S Chr5 15928649 A-G 0 0 Single Base Substitution 0 HET FN2082-S Chr5 18363274 A-T 0 0 Single Base Substitution 0 Homo FN2082-S Chr5 18374352 18374515 0 0 Inversion 0 FN2082-S Chr5 19496421 19496718 0 0 Inversion 0 LOC_Os05g33260 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed FN2082-S Chr5 21751672 21752101 0 0 Inversion 0 LOC_Os05g37200 solute carrier family 35 member F2, putative, expressed FN2082-S Chr5 21912266 21912530 0 0 Inversion 0 FN2082-S Chr5 24370682 24370859 0 0 Inversion 0 FN2082-S Chr5 26154276 26154527 0 0 Inversion 0 LOC_Os05g44990 light repressible receptor protein kinase, putative, expressed FN2082-S Chr5 3584793 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g06840 POLE2A - Putative DNA polymerase epsilon complex subunit, expressed FN2082-S Chr5 5452772 5452784 0 0 Deletion 12 Homo FN2082-S Chr5 6362415 G-T 0 0 Single Base Substitution 0 HET FN2082-S Chr5 7326861 7327079 0 0 Inversion 0 LOC_Os05g12770 NB-ARC domain containing protein, expressed FN2082-S Chr6 13134493 13134494 0 0 Deletion 1 HET FN2082-S Chr6 13498310 13498733 0 0 Inversion 0 FN2082-S Chr6 13498310 13498733 0 0 Inversion 0 LOC_Os06g23140 copper methylamine oxidase precursor, putative, expressed FN2082-S Chr6 16003297 T-A 0 0 Single Base Substitution 0 HET FN2082-S Chr6 166888 167036 0 0 Inversion 0 FN2082-S Chr6 17722353 G-A 0 0 Single Base Substitution 0 HET FN2082-S Chr6 19518741 A-T 0 0 Single Base Substitution 0 HET FN2082-S Chr6 20607133 Chr3 24684655 0 Translocation 0 FN2082-S Chr6 22188579 Chr5 11897074 0 Translocation 0 FN2082-S Chr6 25752705 25752847 0 0 Inversion 0 FN2082-S Chr6 26601684 26601953 0 0 Inversion 0 FN2082-S Chr6 28880863 28881049 0 0 Inversion 0 FN2082-S Chr6 3314924 3315084 0 0 Inversion 0 LOC_Os06g06980 caffeoyl-CoA O-methyltransferase, putative, expressed FN2082-S Chr6 4313972 4314125 0 0 Inversion 0 LOC_Os06g08650 pentatricopeptide, putative, expressed FN2082-S Chr6 5913473 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g11280 12-oxophytodienoate reductase, putative, expressed FN2082-S Chr6 8091421 8091591 0 0 Inversion 0 FN2082-S Chr7 11946329 C-T 0 0 Single Base Substitution 0 HET FN2082-S Chr7 12322094 12322285 0 0 Inversion 0 LOC_Os07g22024 zinc finger family protein, putative, expressed FN2082-S Chr7 16637703 G-T 0 0 Single Base Substitution 0 HET FN2082-S Chr7 1964354 1964571 0 0 Inversion 0 LOC_Os07g04430 expressed protein FN2082-S Chr7 21473924 21474084 0 0 Inversion 0 FN2082-S Chr7 2185270 2185501 0 0 Inversion 0 FN2082-S Chr7 26245167 26245356 0 0 Inversion 0 FN2082-S Chr7 27545916 27546312 0 0 Inversion 0 LOC_Os07g46160 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN2082-S Chr7 28354724 28354883 0 0 Inversion 0 LOC_Os07g47420 60S ribosome subunit biogenesis protein NIP7, putative, expressed FN2082-S Chr7 28689581 28689836 0 0 Inversion 0 LOC_Os07g48050 peroxidase precursor, putative, expressed FN2082-S Chr7 2950748 2950749 0 0 Deletion 1 HET FN2082-S Chr7 4158479 4158924 0 0 Inversion 0 LOC_Os07g08180 PPR repeat containing protein, expressed FN2082-S Chr7 5207884 5208057 0 0 Inversion 0 FN2082-S Chr7 8893194 C-T 0 0 Single Base Substitution 0 HET FN2082-S Chr7 9156962 9156967 0 0 Deletion 5 HET FN2082-S Chr8 11518882 C-G 0 0 Single Base Substitution 0 Homo FN2082-S Chr8 12325631 12325796 0 0 Inversion 0 FN2082-S Chr8 14333724 14334050 0 0 Inversion 0 LOC_Os08g23700 transposon protein, putative, Mutator sub-class, expressed FN2082-S Chr8 15452616 15452896 0 0 Inversion 0 FN2082-S Chr8 1748106 1748262 0 0 Inversion 0 LOC_Os08g03670 galactosyltransferase family protein, putative, expressed FN2082-S Chr8 18652352 18652462 0 0 Inversion 0 FN2082-S Chr8 19155815 19155819 0 0 Deletion 4 Homo FN2082-S Chr8 2100081 2100351 0 0 Inversion 0 LOC_Os08g04290 WD domain, G-beta repeat domain containing protein, expressed FN2082-S Chr8 25884745 25885031 0 0 Inversion 0 FN2082-S Chr8 28383641 28384097 0 0 Inversion 0 FN2082-S Chr8 3980778 3980779 0 0 Insertion 1 HET FN2082-S Chr8 4056625 4056754 0 0 Inversion 0 FN2082-S Chr8 49470 49815 0 0 Inversion 0 FN2082-S Chr8 8794399 9048637 0 0 Inversion 0 FN2082-S Chr8 8794661 9048643 0 0 Inversion 0 FN2082-S Chr8 984849 985048 0 0 Inversion 0 LOC_Os08g02460 expressed protein FN2082-S Chr9 1012229 1012487 0 0 Inversion 0 LOC_Os09g02440 DCL, chloroplast precursor, putative, expressed FN2082-S Chr9 11322747 11323066 0 0 Inversion 0 LOC_Os09g18470 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed FN2082-S Chr9 12349152 C-T 0 0 Single Base Substitution 0 HET FN2082-S Chr9 1238754 T-A 0 0 Single Base Substitution 0 HET FN2082-S Chr9 12954539 12954570 0 0 Insertion 31 HET FN2082-S Chr9 14385731 14385853 0 0 Inversion 0 LOC_Os09g24220 MSH-like DNA mismatch repair protein, putative, expressed FN2082-S Chr9 15684396 15684638 0 0 Inversion 0 FN2082-S Chr9 16399172 16399501 0 0 Inversion 0 LOC_Os09g26970 retrotransposon protein, putative, unclassified, expressed FN2082-S Chr9 1672048 T-A 0 0 Single Base Substitution 0 HET FN2082-S Chr9 17118649 17118912 0 0 Inversion 0 FN2082-S Chr9 3527943 A-T 0 0 Single Base Substitution 0 HET FN2082-S Chr9 7407215 7407525 0 0 Inversion 0 FN2082-S Chr9 9418983 9419191 0 0 Inversion 0