FN2085-S Chr1 14393417 G-A 0 0 Single Base Substitution 0 HET FN2085-S Chr1 15660559 T-C 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR HET LOC_Os01g28000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2085-S Chr1 18119707 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g32990 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2085-S Chr1 2330256 2330259 0 0 Deletion 3 HET FN2085-S Chr1 23881643 24038464 0 0 Inversion 0 FN2085-S Chr1 23881643 24038464 0 0 Inversion 0 LOC_Os01g42340 expressed protein FN2085-S Chr1 23881651 24038477 0 0 Inversion 0 FN2085-S Chr1 23881651 24038477 0 0 Inversion 0 LOC_Os01g42340 expressed protein FN2085-S Chr1 24185770 G-A 0 0 Single Base Substitution 0 Homo FN2085-S Chr1 30542967 30542968 0 0 Deletion 1 frameshift_variant HET LOC_Os01g53160 DUF623 domain containing protein, expressed FN2085-S Chr1 30673891 C-A 0 0 Single Base Substitution 0 HET FN2085-S Chr1 35841081 T-C 0 0 Single Base Substitution 0 Homo FN2085-S Chr10 11334327 G-A 0 0 Single Base Substitution 0 Homo FN2085-S Chr10 11495897 T-C 0 0 Single Base Substitution 0 HET FN2085-S Chr10 12428448 T-C 0 0 Single Base Substitution 0 HET FN2085-S Chr10 16412504 C-A 0 0 Single Base Substitution 0 HET FN2085-S Chr10 22766738 C-G 0 0 Single Base Substitution 0 Homo FN2085-S Chr10 2707179 A-C 0 0 Single Base Substitution 0 HET FN2085-S Chr10 2957920 A-G 0 0 Single Base Substitution 0 HET FN2085-S Chr10 4934277 C-A 0 0 Single Base Substitution 0 Homo FN2085-S Chr11 10592020 C-A 0 0 Single Base Substitution 0 HET FN2085-S Chr11 21379748 21379750 0 0 Insertion 2 HET FN2085-S Chr11 24242427 24250207 0 0 Inversion 0 FN2085-S Chr11 24243978 24243991 0 0 Deletion 13 Homo FN2085-S Chr12 9135217 Chr8 9992196 0 Translocation 0 LOC_Os12g16030 retrotransposon protein, putative, unclassified, expressed FN2085-S Chr2 25612702 A-T 0 0 Single Base Substitution 0 HET FN2085-S Chr2 26239410 26239419 0 0 Deletion 9 HET FN2085-S Chr2 27417641 27417643 0 0 Deletion 2 Homo FN2085-S Chr2 27424698 C-G 0 0 Single Base Substitution 0 Homo FN2085-S Chr2 3841407 A-T 0 0 Single Base Substitution 0 HET FN2085-S Chr2 4632964 A-T 0 0 Single Base Substitution 0 HET FN2085-S Chr2 6764463 A-T 0 0 Single Base Substitution 0 HET FN2085-S Chr2 8289236 A-C 0 0 Single Base Substitution 0 HET FN2085-S Chr3 13356192 13356194 0 0 Deletion 2 HET FN2085-S Chr3 1499149 1499252 0 0 Inversion 0 FN2085-S Chr3 15822283 C-T 0 0 Single Base Substitution 0 Homo FN2085-S Chr3 16699500 16699519 0 0 Deletion 19 HET FN2085-S Chr3 16744001 16780000 0 0 Deletion 35999 LOC_Os03g29400 expressed protein FN2085-S Chr3 16744001 16780000 0 0 Deletion 35999 LOC_Os03g29410 tyrosine protein kinase domain containing protein, putative, expressed FN2085-S Chr3 16744001 16780000 0 0 Deletion 35999 LOC_Os03g29420 hypothetical protein FN2085-S Chr3 16744001 16780000 0 0 Deletion 35999 LOC_Os03g29430 retrotransposon protein, putative, unclassified FN2085-S Chr3 16744001 16780000 0 0 Deletion 35999 LOC_Os03g29440 retrotransposon protein, putative, unclassified, expressed FN2085-S Chr3 1965196 A-G 0 0 Single Base Substitution 0 HET FN2085-S Chr3 26340305 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g46550 RGH1A, putative, expressed FN2085-S Chr3 26645708 T-C 0 0 Single Base Substitution 0 HET FN2085-S Chr3 33943841 33944041 0 0 Inversion 0 LOC_Os03g59620 phospholipase, patatin family, putative, expressed FN2085-S Chr3 7490459 T-A 0 0 Single Base Substitution 0 Homo FN2085-S Chr3 7877320 7877333 0 0 Deletion 13 frameshift_variant&splice_acceptor_variant&splice_region_variant&intron_variant Homo LOC_Os03g14510 immature colon carcinoma transcript 1 protein precursor, putative, expressed FN2085-S Chr3 7927151 7927184 0 0 Insertion 33 disruptive_inframe_insertion HET LOC_Os03g14600 transposon protein, putative, unclassified, expressed FN2085-S Chr4 12004120 A-T 0 0 Single Base Substitution 0 HET FN2085-S Chr4 26769522 T-C 0 0 Single Base Substitution 0 HET FN2085-S Chr4 2719133 G-A 0 0 Single Base Substitution 0 HET FN2085-S Chr4 33532312 Chr1 41587063 0 Translocation 0 LOC_Os01g71800 lecithin cholesterol acyltransferase, putative, expressed FN2085-S Chr4 33532312 Chr1 41587063 0 Translocation 0 LOC_Os04g56240 lipase, putative, expressed FN2085-S Chr5 10991111 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g18940 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed FN2085-S Chr5 15602732 G-T 0 0 Single Base Substitution 0 HET FN2085-S Chr5 15602733 T-G 0 0 Single Base Substitution 0 HET FN2085-S Chr5 15602735 G-T 0 0 Single Base Substitution 0 HET FN2085-S Chr5 18279445 C-G 0 0 Single Base Substitution 0 Homo FN2085-S Chr5 28513326 A-G 0 0 Single Base Substitution 0 HET FN2085-S Chr5 9578077 9578084 0 0 Deletion 7 frameshift_variant HET LOC_Os05g16810 retrotransposon protein, putative, unclassified FN2085-S Chr5 9737278 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g17050 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2085-S Chr5 9997702 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g17410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2085-S Chr6 14476374 14476375 0 0 Insertion 1 HET FN2085-S Chr6 16477602 Chr3 16739600 0 Translocation 0 LOC_Os03g29389 hypothetical protein FN2085-S Chr6 16477602 Chr3 16739600 0 Translocation 0 LOC_Os06g28880 retrotransposon protein, putative, unclassified, expressed FN2085-S Chr6 16477606 17061966 0 0 Inversion 0 LOC_Os06g28880 retrotransposon protein, putative, unclassified, expressed FN2085-S Chr6 16477606 17061966 0 0 Inversion 0 LOC_Os06g29710 OsFBD12 - F-box and FBD domain containing protein, expressed FN2085-S Chr6 16638126 C-A 0 0 Single Base Substitution 0 Homo FN2085-S Chr6 17061951 Chr3 16744180 0 Translocation 0 LOC_Os06g29710 OsFBD12 - F-box and FBD domain containing protein, expressed FN2085-S Chr6 23683360 G-A 0 0 Single Base Substitution 0 Homo FN2085-S Chr6 25850936 A-G 0 0 Single Base Substitution 0 HET FN2085-S Chr6 28763937 28763940 0 0 Insertion 3 inframe_insertion HET LOC_Os06g47510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2085-S Chr7 10222779 Chr1 1378166 0 Translocation 0 FN2085-S Chr7 12903849 12904063 0 0 Inversion 0 LOC_Os07g22890 expressed protein FN2085-S Chr7 14301185 C-A 0 0 Single Base Substitution 0 HET FN2085-S Chr7 16280609 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g27900 retrotransposon protein, putative, Ty1-copia subclass FN2085-S Chr7 22069268 Chr6 25276925 0 Translocation 0 LOC_Os07g36830 OsFBX250 - F-box domain containing protein, expressed FN2085-S Chr7 24780101 24780103 0 0 Deletion 2 Homo FN2085-S Chr7 28114885 C-A 0 0 Single Base Substitution 0 Homo FN2085-S Chr8 20286334 20286368 0 0 Insertion 34 HET FN2085-S Chr8 24940376 A-G 0 0 Single Base Substitution 0 HET FN2085-S Chr8 6201309 6201490 0 0 Deletion 181 HET FN2085-S Chr8 9196504 G-T 0 0 Single Base Substitution 0 HET FN2085-S Chr8 9196505 A-G 0 0 Single Base Substitution 0 HET FN2085-S Chr9 14324879 G-C 0 0 Single Base Substitution 0 Homo FN2085-S Chr9 18271155 A-G 0 0 Single Base Substitution 0 HET FN2085-S Chr9 22221759 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g38630 expressed protein FN2085-S Chr9 8228135 Chr5 8546812 0 Translocation 0