FN2088-S Chr1 10487011 10487013 0 0 Insertion 2 HET FN2088-S Chr1 11316426 C-T 0 0 Single Base Substitution 0 HET FN2088-S Chr1 15948409 A-G 0 0 Single Base Substitution 0 Homo FN2088-S Chr1 29054376 A-G 0 0 Single Base Substitution 0 Homo FN2088-S Chr10 1051332 1051333 0 0 Insertion 1 HET FN2088-S Chr10 8065583 A-T 0 0 Single Base Substitution 0 HET FN2088-S Chr11 14486547 G-C 0 0 Single Base Substitution 0 HET FN2088-S Chr11 14603484 14603687 0 0 Inversion 0 FN2088-S Chr11 22786001 22802000 0 0 Deletion 15999 LOC_Os11g38462 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2088-S Chr11 22786001 22802000 0 0 Deletion 15999 LOC_Os11g38470 expressed protein FN2088-S Chr11 22786001 22802000 0 0 Deletion 15999 LOC_Os11g38480 NBS-LRR type disease resistance protein, putative, expressed FN2088-S Chr11 24451267 Chr2 28052150 0 Translocation 0 LOC_Os11g40870 expressed protein FN2088-S Chr11 5107092 5110579 0 0 Inversion 0 LOC_Os11g09530 retrotransposon protein, putative, unclassified, expressed FN2088-S Chr11 5107092 5110579 0 0 Inversion 0 LOC_Os11g09540 retrotransposon protein, putative, unclassified FN2088-S Chr12 14835345 14835347 0 0 Deletion 2 Homo FN2088-S Chr12 20140083 Chr6 22179754 0 Translocation 0 LOC_Os12g33300 integral membrane protein DUF6 containing protein, expressed FN2088-S Chr12 23773748 A-T 0 0 Single Base Substitution 0 HET FN2088-S Chr12 3822625 Chr4 28805483 0 Translocation 0 LOC_Os12g07620 ligA, putative, expressed FN2088-S Chr2 10131158 G-A 0 0 Single Base Substitution 0 HET FN2088-S Chr2 20373905 20373906 0 0 Deletion 1 Homo FN2088-S Chr2 29379619 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g48000 TBC domain containing protein, expressed FN2088-S Chr3 10420953 C-A 0 0 Single Base Substitution 0 HET FN2088-S Chr3 23203584 C-T 0 0 Single Base Substitution 0 HET FN2088-S Chr3 24153002 24153003 0 0 Insertion 1 HET FN2088-S Chr3 36335753 36335755 0 0 Insertion 2 HET FN2088-S Chr4 1554252 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g03560 retrotransposon protein, putative, unclassified, expressed FN2088-S Chr4 30813909 30813915 0 0 Deletion 6 disruptive_inframe_deletion Homo LOC_Os04g51930 retrotransposon protein, putative, LINE subclass, expressed FN2088-S Chr4 31026519 31026527 0 0 Deletion 8 Homo FN2088-S Chr4 33826216 G-C 0 0 Single Base Substitution 0 Homo FN2088-S Chr4 33848735 33848736 0 0 Deletion 1 HET FN2088-S Chr4 5661918 G-A 0 0 Single Base Substitution 0 Homo FN2088-S Chr4 8574555 G-A 0 0 Single Base Substitution 0 HET FN2088-S Chr5 13538894 13745070 0 0 Inversion 0 LOC_Os05g23610 protein phosphatase inhibitor 2 containing protein, expressed FN2088-S Chr5 13538905 13746274 0 0 Inversion 0 LOC_Os05g23610 protein phosphatase inhibitor 2 containing protein, expressed FN2088-S Chr5 13538905 13746274 0 0 Inversion 0 LOC_Os05g23900 expressed protein FN2088-S Chr5 19500511 G-A 0 0 Single Base Substitution 0 HET FN2088-S Chr5 4995202 4995387 0 0 Deletion 185 HET FN2088-S Chr6 17681542 Chr2 27705251 0 Translocation 0 LOC_Os02g45530 HOTHEAD precursor, putative, expressed FN2088-S Chr6 17681542 Chr2 27705251 0 Translocation 0 LOC_Os06g30560 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2088-S Chr6 20819735 20819966 0 0 Inversion 0 FN2088-S Chr7 20657334 20657336 0 0 Deletion 2 frameshift_variant HET LOC_Os07g34450 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2088-S Chr7 6952568 6952581 0 0 Deletion 13 HET FN2088-S Chr7 9398940 Chr5 14158318 0 Translocation 0 FN2088-S Chr8 15236360 A-T 0 0 Single Base Substitution 0 HET FN2088-S Chr8 1602324 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g03420 kelch repeat protein, putative, expressed FN2088-S Chr8 17140573 C-T 0 0 Single Base Substitution 0 HET FN2088-S Chr8 19261297 A-G 0 0 Single Base Substitution 0 HET FN2088-S Chr8 19741974 A-T 0 0 Single Base Substitution 0 HET FN2088-S Chr8 1999345 1999579 0 0 Inversion 0 FN2088-S Chr8 22191140 Chr3 9225261 0 Translocation 0 LOC_Os08g35190 auxin-repressed protein, putative, expressed FN2088-S Chr8 22193007 Chr2 27705262 0 Translocation 0 FN2088-S Chr8 22193007 Chr2 27705262 0 Translocation 0 LOC_Os02g45530 HOTHEAD precursor, putative, expressed FN2088-S Chr8 23551804 G-A 0 0 Single Base Substitution 0 HET FN2088-S Chr8 23551805 C-A 0 0 Single Base Substitution 0 HET FN2088-S Chr8 8856906 8856909 0 0 Insertion 3 HET FN2088-S Chr8 9601094 T-C 0 0 Single Base Substitution 0 HET FN2088-S Chr9 16416512 Chr2 2673921 0 Translocation 0 FN2088-S Chr9 17890348 17890350 0 0 Deletion 2 HET FN2088-S Chr9 5933389 5933390 0 0 Insertion 1 HET FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15140 retrotransposon protein, putative, unclassified, expressed FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15150 expressed protein FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15160 retrotransposon protein, putative, unclassified FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15170 nucleobase-ascorbate transporter, putative, expressed FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15180 transposon protein, putative, unclassified, expressed FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15190 expressed protein FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15200 ankyrin repeat family protein, putative, expressed FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15210 retrotransposon protein, putative, unclassified, expressed FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15220 retrotransposon protein, putative, unclassified, expressed FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15230 expressed protein FN2088-S Chr9 9159001 9256000 0 0 Deletion 96999 LOC_Os09g15240 carotenoid cleavage dioxygenase, putative, expressed