FN2089-S Chr1 10359970 10360445 0 0 Inversion 0 FN2089-S Chr1 15893469 T-C 0 0 Single Base Substitution 0 HET FN2089-S Chr1 19323682 T-C 0 0 Single Base Substitution 0 HET FN2089-S Chr1 20892700 C-T 0 0 Single Base Substitution 0 HET FN2089-S Chr1 25996937 T-C 0 0 Single Base Substitution 0 Homo FN2089-S Chr1 29494400 A-T 0 0 Single Base Substitution 0 Homo FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53800 glutamate carboxypeptidase 2, putative, expressed FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53810 peptidase, putative, expressed FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53820 expressed protein FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53830 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53840 protein kinase family protein, putative, expressed FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53850 hypothetical protein FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53860 expressed protein FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53870 transposon protein, putative, unclassified, expressed FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53880 OsIAA6 - Auxin-responsive Aux/IAA gene family member, expressed FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53890 RNA methyltransferase, TrmH family protein, putative, expressed FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53900 elongation factor, putative, expressed FN2089-S Chr1 30925001 31006000 0 0 Deletion 80999 LOC_Os01g53910 dehydrogenase, putative, expressed FN2089-S Chr1 35040895 G-C 0 0 Single Base Substitution 0 Homo FN2089-S Chr1 39928941 39928951 0 0 Deletion 10 Homo FN2089-S Chr1 40824285 40824286 0 0 Deletion 1 Homo FN2089-S Chr1 7835369 7835370 0 0 Deletion 1 HET FN2089-S Chr10 15377266 15377267 0 0 Insertion 1 HET FN2089-S Chr10 20422939 20422943 0 0 Deletion 4 Homo FN2089-S Chr10 2694374 2694378 0 0 Insertion 4 HET FN2089-S Chr10 3100805 C-A 0 0 Single Base Substitution 0 Homo FN2089-S Chr10 3870139 3870147 0 0 Deletion 8 HET FN2089-S Chr10 9157727 9157728 0 0 Deletion 1 frameshift_variant Homo LOC_Os10g18060 retrotransposon protein, putative, unclassified, expressed FN2089-S Chr11 15092255 C-A 0 0 Single Base Substitution 0 HET FN2089-S Chr11 15112744 15112752 0 0 Deletion 8 HET FN2089-S Chr11 16462423 T-C 0 0 Single Base Substitution 0 HET FN2089-S Chr11 22719738 G-A 0 0 Single Base Substitution 0 HET FN2089-S Chr11 2463696 Chr8 8709869 0 Translocation 0 LOC_Os11g05480 transcription factor, putative, expressed FN2089-S Chr11 25086777 G-T 0 0 Single Base Substitution 0 HET FN2089-S Chr11 27067876 27067877 0 0 Insertion 1 frameshift_variant HET LOC_Os11g44730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2089-S Chr11 28468659 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g47320 protein transporter, putative, expressed FN2089-S Chr11 5959093 6671248 0 0 Inversion 0 FN2089-S Chr11 5959093 6671248 0 0 Inversion 0 LOC_Os11g12000 NBS-LRR disease resistance protein, putative, expressed FN2089-S Chr12 12752943 12752950 0 0 Deletion 7 Homo FN2089-S Chr12 13248561 13248572 0 0 Deletion 11 HET FN2089-S Chr12 13311543 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g23520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2089-S Chr12 2204429 T-C 0 0 Single Base Substitution 0 HET FN2089-S Chr12 3521190 3521194 0 0 Deletion 4 HET FN2089-S Chr12 4133961 4133966 0 0 Deletion 5 frameshift_variant HET LOC_Os12g08110 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2089-S Chr12 448279 G-A 0 0 Single Base Substitution 0 HET FN2089-S Chr12 5511207 5511221 0 0 Insertion 14 HET FN2089-S Chr12 9499638 Chr11 15465430 0 Translocation 0 FN2089-S Chr2 19469851 19469852 0 0 Deletion 1 Homo FN2089-S Chr2 21110653 21110655 0 0 Insertion 2 HET FN2089-S Chr2 23009733 23009734 0 0 Insertion 1 HET FN2089-S Chr2 31315082 G-A 0 0 Single Base Substitution 0 HET FN2089-S Chr2 8560780 C-T 0 0 Single Base Substitution 0 HET FN2089-S Chr2 8560948 A-T 0 0 Single Base Substitution 0 HET FN2089-S Chr3 21537178 21537179 0 0 Deletion 1 HET FN2089-S Chr3 29411070 G-A 0 0 Single Base Substitution 0 HET FN2089-S Chr3 6194949 T-C 0 0 Single Base Substitution 0 HET FN2089-S Chr4 11259112 C-T 0 0 Single Base Substitution 0 Homo FN2089-S Chr4 16100616 G-A 0 0 Single Base Substitution 0 HET FN2089-S Chr4 18731681 18731682 0 0 Deletion 1 HET FN2089-S Chr4 19945001 19964000 0 0 Deletion 18999 FN2089-S Chr4 21633555 G-T 0 0 Single Base Substitution 0 Homo FN2089-S Chr4 27088290 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g45770 retrotransposon protein, putative, unclassified, expressed FN2089-S Chr4 5853086 C-A 0 0 Single Base Substitution 0 Homo FN2089-S Chr5 10316301 A-G 0 0 Single Base Substitution 0 HET FN2089-S Chr5 14122529 14148000 0 0 Inversion 0 LOC_Os05g24460 retrotransposon protein, putative, unclassified, expressed FN2089-S Chr5 14122529 14148000 0 0 Inversion 0 LOC_Os05g24520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2089-S Chr5 14122624 14147999 0 0 Inversion 0 LOC_Os05g24460 retrotransposon protein, putative, unclassified, expressed FN2089-S Chr5 14122624 14147999 0 0 Inversion 0 LOC_Os05g24520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2089-S Chr5 1666989 C-T 0 0 Single Base Substitution 0 HET FN2089-S Chr5 21483279 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g36240 expressed protein FN2089-S Chr5 25169985 C-A 0 0 Single Base Substitution 0 HET FN2089-S Chr5 29066222 29069446 0 0 Inversion 0 FN2089-S Chr5 29066222 29069446 0 0 Inversion 0 LOC_Os05g50710 late embryogenesis abundant protein, putative, expressed FN2089-S Chr5 29066810 29069463 0 0 Inversion 0 FN2089-S Chr5 29066810 29069463 0 0 Inversion 0 LOC_Os05g50710 late embryogenesis abundant protein, putative, expressed FN2089-S Chr6 13890681 Chr5 12667012 0 Translocation 0 FN2089-S Chr6 18208123 Chr4 19200802 0 Translocation 0 FN2089-S Chr6 5223549 T-C 0 0 Single Base Substitution 0 Homo FN2089-S Chr6 7314100 7314187 0 0 Deletion 87 HET FN2089-S Chr6 7878629 7878631 0 0 Deletion 2 HET FN2089-S Chr7 18876913 18877132 0 0 Inversion 0 FN2089-S Chr7 22828228 22828229 0 0 Deletion 1 frameshift_variant Homo LOC_Os07g38070 protein kinase, putative, expressed FN2089-S Chr8 12011417 C-T 0 0 Single Base Substitution 0 HET FN2089-S Chr9 11071685 C-A 0 0 Single Base Substitution 0 HET FN2089-S Chr9 15758890 15759098 0 0 Inversion 0 LOC_Os09g26144 glutamate receptor, putative, expressed FN2089-S Chr9 16880780 C-G 0 0 Single Base Substitution 0 Homo FN2089-S Chr9 22825450 C-T 0 0 Single Base Substitution 0 HET