FN2091-S Chr1 13635001 13690000 0 0 Deletion 54999 LOC_Os01g24200 expressed protein FN2091-S Chr1 13635001 13690000 0 0 Deletion 54999 LOC_Os01g24210 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2091-S Chr1 13635001 13690000 0 0 Deletion 54999 LOC_Os01g24220 retrotransposon protein, putative, Ty1-copia subclass FN2091-S Chr1 13635001 13690000 0 0 Deletion 54999 LOC_Os01g24230 retrotransposon, putative, centromere-specific FN2091-S Chr1 13635001 13690000 0 0 Deletion 54999 LOC_Os01g24240 expressed protein FN2091-S Chr1 13635001 13690000 0 0 Deletion 54999 LOC_Os01g24260 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2091-S Chr1 13635001 13690000 0 0 Deletion 54999 LOC_Os01g24270 hypothetical protein FN2091-S Chr1 13635001 13690000 0 0 Deletion 54999 LOC_Os01g24280 retrotransposon protein, putative, unclassified, expressed FN2091-S Chr1 13635001 13690000 0 0 Deletion 54999 LOC_Os01g24294 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2091-S Chr1 13691001 13717000 0 0 Deletion 25999 LOC_Os01g24294 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2091-S Chr1 13691001 13717000 0 0 Deletion 25999 LOC_Os01g24310 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2091-S Chr1 13691001 13717000 0 0 Deletion 25999 LOC_Os01g24320 retrotransposon protein, putative, unclassified, expressed FN2091-S Chr1 13691001 13717000 0 0 Deletion 25999 LOC_Os01g24330 retrotransposon protein, putative, unclassified, expressed FN2091-S Chr1 13691001 13717000 0 0 Deletion 25999 LOC_Os01g24340 expressed protein FN2091-S Chr1 16532109 C-T 0 0 Single Base Substitution 0 HET FN2091-S Chr1 18810718 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g34140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2091-S Chr1 31523263 31523454 0 0 Inversion 0 FN2091-S Chr1 34457652 C-A 0 0 Single Base Substitution 0 HET FN2091-S Chr1 37488954 37488956 0 0 Deletion 2 HET FN2091-S Chr1 38649300 38649301 0 0 Deletion 1 HET FN2091-S Chr1 7432461 7432591 0 0 Inversion 0 LOC_Os01g13330 expressed protein FN2091-S Chr10 12511563 G-A 0 0 Single Base Substitution 0 HET FN2091-S Chr10 14719507 14719513 0 0 Deletion 6 HET FN2091-S Chr10 18187624 18187625 0 0 Insertion 1 HET FN2091-S Chr10 18662092 18662193 0 0 Inversion 0 LOC_Os10g34970 expressed protein FN2091-S Chr10 18939685 A-G 0 0 Single Base Substitution 0 HET FN2091-S Chr10 22118239 G-T 0 0 Single Base Substitution 0 HET FN2091-S Chr10 2469440 Chr4 679680 0 Translocation 0 FN2091-S Chr10 2469440 Chr4 679680 0 Translocation 0 LOC_Os04g02100 expressed protein FN2091-S Chr11 1111606 Chr1 24516348 0 Translocation 0 FN2091-S Chr11 1111607 Chr1 24516339 0 Translocation 0 FN2091-S Chr11 12306429 G-A 0 0 Single Base Substitution 0 HET FN2091-S Chr11 13259231 C-T 0 0 Single Base Substitution 0 HET FN2091-S Chr11 14602721 14602730 0 0 Deletion 9 HET FN2091-S Chr11 2090465 G-A 0 0 Single Base Substitution 0 HET FN2091-S Chr11 21024699 21024701 0 0 Deletion 2 HET FN2091-S Chr11 21295364 T-A 0 0 Single Base Substitution 0 HET FN2091-S Chr11 21412876 22027876 0 0 Inversion 0 FN2091-S Chr11 21412876 22027876 0 0 Inversion 0 LOC_Os11g37300 OsFBDUF53 - F-box and DUF domain containing protein, expressed FN2091-S Chr11 21412877 22027876 0 0 Inversion 0 FN2091-S Chr11 21412877 22027876 0 0 Inversion 0 LOC_Os11g37300 OsFBDUF53 - F-box and DUF domain containing protein, expressed FN2091-S Chr11 3186018 3186023 0 0 Deletion 5 HET FN2091-S Chr12 19238409 T-C 0 0 Single Base Substitution 0 HET FN2091-S Chr12 20004164 C-T 0 0 Single Base Substitution 0 Homo FN2091-S Chr12 229497 Chr11 204242 0 Translocation 0 LOC_Os12g01370 fatty acid desaturase, putative, expressed FN2091-S Chr12 2749766 2749767 0 0 Deletion 1 frameshift_variant HET LOC_Os12g05970 expressed protein FN2091-S Chr12 6859009 6859010 0 0 Deletion 1 Homo FN2091-S Chr12 8134000 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g14280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2091-S Chr12 9309081 9309082 0 0 Deletion 1 Homo FN2091-S Chr2 11189631 G-A 0 0 Single Base Substitution 0 HET FN2091-S Chr2 11903725 T-A 0 0 Single Base Substitution 0 HET FN2091-S Chr2 30584293 C-G 0 0 Single Base Substitution 0 HET FN2091-S Chr2 3198292 G-T 0 0 Single Base Substitution 0 HET FN2091-S Chr3 11878381 Chr1 37612656 0 Translocation 0 LOC_Os03g20940 stress responsive protein, putative, expressed FN2091-S Chr3 11881884 Chr1 37612796 0 Translocation 0 FN2091-S Chr3 14720376 Chr2 24201916 0 Translocation 0 FN2091-S Chr3 14720377 Chr2 24200634 0 Translocation 0 FN2091-S Chr3 14720377 Chr2 24200634 0 Translocation 0 LOC_Os02g40000 trafficking protein particle complex subunit, putative, expressed FN2091-S Chr3 15099624 C-T 0 0 Single Base Substitution 0 HET FN2091-S Chr3 25288818 25289097 0 0 Inversion 0 FN2091-S Chr3 31844232 C-A 0 0 Single Base Substitution 0 HET FN2091-S Chr3 33682342 T-C 0 0 Single Base Substitution 0 Homo FN2091-S Chr3 3391938 T-C 0 0 Single Base Substitution 0 HET FN2091-S Chr3 36232485 G-C 0 0 Single Base Substitution 0 Homo FN2091-S Chr3 36235333 36235335 0 0 Deletion 2 Homo FN2091-S Chr3 5544001 5600000 0 0 Deletion 55999 LOC_Os03g10820 expressed protein FN2091-S Chr3 5544001 5600000 0 0 Deletion 55999 LOC_Os03g10830 hypothetical protein FN2091-S Chr3 5544001 5600000 0 0 Deletion 55999 LOC_Os03g10840 expressed protein FN2091-S Chr3 5544001 5600000 0 0 Deletion 55999 LOC_Os03g10850 FAD-linked sulfhydryl oxidase ALR, putative, expressed FN2091-S Chr3 5544001 5600000 0 0 Deletion 55999 LOC_Os03g10860 expressed protein FN2091-S Chr3 5544001 5600000 0 0 Deletion 55999 LOC_Os03g10870 membrane associated DUF588 domain containing protein, putative, expressed FN2091-S Chr3 5544001 5600000 0 0 Deletion 55999 LOC_Os03g10880 BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed FN2091-S Chr3 5544001 5600000 0 0 Deletion 55999 LOC_Os03g10890 zinc finger, C3HC4 type domain containing protein, expressed FN2091-S Chr3 5544001 5600000 0 0 Deletion 55999 LOC_Os03g10900 disease resistance protein, putative, expressed FN2091-S Chr4 18075771 G-C 0 0 Single Base Substitution 0 HET FN2091-S Chr4 21069241 21069458 0 0 Inversion 0 FN2091-S Chr4 8796450 8796451 0 0 Deletion 1 frameshift_variant Homo LOC_Os04g16200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2091-S Chr4 9824713 9824714 0 0 Deletion 1 frameshift_variant HET LOC_Os04g17880 retrotransposon protein, putative, unclassified, expressed FN2091-S Chr5 11728280 G-A 0 0 Single Base Substitution 0 HET FN2091-S Chr5 18038658 18038662 0 0 Deletion 4 Homo FN2091-S Chr5 25863315 G-T 0 0 Single Base Substitution 0 HET FN2091-S Chr5 29472664 29472666 0 0 Insertion 2 HET FN2091-S Chr5 4477246 G-A 0 0 Single Base Substitution 0 HET FN2091-S Chr5 5652015 T-A 0 0 Single Base Substitution 0 Homo FN2091-S Chr5 5652016 T-A 0 0 Single Base Substitution 0 Homo FN2091-S Chr5 5652060 G-T 0 0 Single Base Substitution 0 Homo FN2091-S Chr5 6341043 C-T 0 0 Single Base Substitution 0 Homo FN2091-S Chr5 7875984 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g14100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2091-S Chr5 9775635 9775638 0 0 Deletion 3 inframe_deletion Homo LOC_Os05g17110 retrotransposon protein, putative, unclassified, expressed FN2091-S Chr6 12657438 12657444 0 0 Deletion 6 Homo FN2091-S Chr6 13824594 14385178 0 0 Inversion 0 FN2091-S Chr6 14303570 G-A 0 0 Single Base Substitution 0 Homo FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24430 expressed protein FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24440 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24450 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24460 pleiotropic drug resistance protein 2, putative, expressed FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24470 expressed protein FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24480 expressed protein FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24490 expressed protein FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24500 expressed protein FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24510 retrotransposon protein, putative, unclassified FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24520 expressed protein FN2091-S Chr6 14305001 14385000 0 0 Deletion 79999 LOC_Os06g24530 transposon protein, putative, unclassified, expressed FN2091-S Chr6 14305127 Chr3 11881867 0 Translocation 0 LOC_Os06g24420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2091-S Chr6 14400258 14400398 0 0 Inversion 0 FN2091-S Chr6 15404010 T-G 0 0 Single Base Substitution 0 Homo FN2091-S Chr6 24088199 Chr2 25837297 0 Translocation 0 FN2091-S Chr6 24713079 C-T 0 0 Single Base Substitution 0 HET FN2091-S Chr6 3033845 Chr3 8228323 0 Translocation 0 FN2091-S Chr6 3033845 Chr3 8228323 0 Translocation 0 LOC_Os03g15060 expressed protein FN2091-S Chr6 8620211 T-A 0 0 Single Base Substitution 0 HET FN2091-S Chr7 19265943 19266404 0 0 Inversion 0 LOC_Os07g32400 STE_PAK_Ste20_MST_like.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed FN2091-S Chr8 13390230 13390355 0 0 Inversion 0 FN2091-S Chr8 16250490 A-C 0 0 Single Base Substitution 0 HET FN2091-S Chr8 22603829 C-T 0 0 Single Base Substitution 0 HET FN2091-S Chr8 27740012 T-C 0 0 Single Base Substitution 0 HET FN2091-S Chr8 8981228 9474207 0 0 Inversion 0 FN2091-S Chr8 8981232 9474732 0 0 Inversion 0 FN2091-S Chr8 9105698 9105704 0 0 Deletion 6 Homo FN2091-S Chr9 10031258 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os09g16400 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2091-S Chr9 11161921 11161944 0 0 Deletion 23 frameshift_variant HET LOC_Os09g18210 transposon protein, putative, CACTA, En/Spm sub-class FN2091-S Chr9 16146205 16146219 0 0 Insertion 14 HET FN2091-S Chr9 17421077 Chr1 36029808 0 Translocation 0 FN2091-S Chr9 17421077 Chr1 36029808 0 Translocation 0 LOC_Os01g62260 thaumatin, putative, expressed