FN2102-S Chr1 11247626 12037466 0 0 Inversion 0 FN2102-S Chr1 11247626 12037466 0 0 Inversion 0 LOC_Os01g21530 retrotransposon protein, putative, unclassified, expressed FN2102-S Chr1 39127550 39127878 0 0 Inversion 0 FN2102-S Chr1 40427164 C-T 0 0 Single Base Substitution 0 Homo FN2102-S Chr1 41320465 T-A 0 0 Single Base Substitution 0 Homo FN2102-S Chr10 15139057 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g29050 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN2102-S Chr10 19129905 19862020 0 0 Inversion 0 LOC_Os10g35770 E2F-related protein, putative, expressed FN2102-S Chr10 19129913 19862038 0 0 Inversion 0 LOC_Os10g35770 E2F-related protein, putative, expressed FN2102-S Chr10 287168 287170 0 0 Insertion 2 HET FN2102-S Chr10 4770009 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g08820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2102-S Chr11 10924574 Chr9 7407204 0 Translocation 0 FN2102-S Chr11 20495066 20495068 0 0 Insertion 2 HET FN2102-S Chr11 21138906 Chr7 13468624 0 Translocation 0 LOC_Os11g35970 retrotransposon protein, putative, unclassified, expressed FN2102-S Chr11 6132944 6133414 0 0 Deletion 470 HET FN2102-S Chr11 7181431 Chr1 32519417 0 Translocation 0 FN2102-S Chr11 7181431 Chr1 32519417 0 Translocation 0 LOC_Os01g56410 retrotransposon protein, putative, unclassified, expressed FN2102-S Chr11 7550746 7550747 0 0 Deletion 1 HET FN2102-S Chr11 8406021 Chr7 10616299 0 Translocation 0 FN2102-S Chr12 13510871 Chr7 1293651 0 Translocation 0 FN2102-S Chr12 16084927 Chr9 11363237 0 Translocation 0 FN2102-S Chr12 16851019 C-T 0 0 Single Base Substitution 0 HET FN2102-S Chr12 18690359 Chr5 6215295 0 Translocation 0 FN2102-S Chr12 20559254 20559511 0 0 Inversion 0 FN2102-S Chr12 20559259 20559445 0 0 Inversion 0 FN2102-S Chr12 20559316 20559471 0 0 Inversion 0 FN2102-S Chr12 24485218 T-C 0 0 Single Base Substitution 0 HET FN2102-S Chr12 24680799 Chr9 18280007 0 Translocation 0 FN2102-S Chr12 5628494 5628495 0 0 Insertion 1 HET FN2102-S Chr12 8540895 8541355 0 0 Inversion 0 LOC_Os12g14930 ATP synthase protein MI25, putative, expressed FN2102-S Chr2 13702392 13702557 0 0 Deletion 165 HET FN2102-S Chr2 13702837 13702992 0 0 Deletion 155 HET FN2102-S Chr2 15217157 15217158 0 0 Deletion 1 frameshift_variant Homo LOC_Os02g25930 retrotransposon protein, putative, unclassified, expressed FN2102-S Chr2 16496952 16496953 0 0 Insertion 1 HET FN2102-S Chr2 18431061 18431062 0 0 Deletion 1 HET FN2102-S Chr2 27358030 G-A 0 0 Single Base Substitution 0 Homo FN2102-S Chr2 27358031 G-T 0 0 Single Base Substitution 0 Homo FN2102-S Chr2 27358048 G-T 0 0 Single Base Substitution 0 Homo FN2102-S Chr2 30944039 30944040 0 0 Deletion 1 frameshift_variant HET LOC_Os02g50660 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2102-S Chr2 35695842 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g58360 expressed protein FN2102-S Chr2 4463675 4463677 0 0 Deletion 2 Homo FN2102-S Chr3 10515348 G-A 0 0 Single Base Substitution 0 HET FN2102-S Chr3 10515349 G-A 0 0 Single Base Substitution 0 HET FN2102-S Chr3 12021924 C-T 0 0 Single Base Substitution 0 HET FN2102-S Chr3 1449810 C-G 0 0 Single Base Substitution 0 HET FN2102-S Chr3 14987577 14987578 0 0 Insertion 1 HET FN2102-S Chr3 15621097 T-A 0 0 Single Base Substitution 0 Homo FN2102-S Chr3 15621098 C-T 0 0 Single Base Substitution 0 Homo FN2102-S Chr3 15621099 T-G 0 0 Single Base Substitution 0 Homo FN2102-S Chr3 17960279 G-A 0 0 Single Base Substitution 0 HET FN2102-S Chr3 19837527 A-C 0 0 Single Base Substitution 0 Homo FN2102-S Chr3 23197331 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os03g41770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2102-S Chr3 24566392 24566393 0 0 Insertion 1 HET FN2102-S Chr3 29627043 Chr1 2484851 0 Translocation 0 LOC_Os03g51710 homeobox protein knotted-1, putative, expressed FN2102-S Chr3 35283737 G-A 0 0 Single Base Substitution 0 HET FN2102-S Chr3 35548945 G-A 0 0 Single Base Substitution 0 HET FN2102-S Chr4 24662442 24662446 0 0 Insertion 4 HET FN2102-S Chr4 29096434 29096843 0 0 Inversion 0 FN2102-S Chr4 32040721 Chr3 31809571 0 Translocation 0 FN2102-S Chr4 3954889 Chr3 1385048 0 Translocation 0 FN2102-S Chr4 3954889 Chr3 1385048 0 Translocation 0 LOC_Os03g03240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2102-S Chr4 7495718 7496067 0 0 Deletion 349 HET FN2102-S Chr4 7545633 Chr1 32129091 0 Translocation 0 LOC_Os04g13530 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed FN2102-S Chr4 7557454 T-A 0 0 Single Base Substitution 0 Homo FN2102-S Chr4 8253409 C-T 0 0 Single Base Substitution 0 HET FN2102-S Chr5 15322913 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g26340 retrotransposon protein, putative, Ty3-gypsy subclass FN2102-S Chr5 15363268 C-G 0 0 Single Base Substitution 0 HET FN2102-S Chr5 29906816 29906818 0 0 Insertion 2 HET FN2102-S Chr5 3676021 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g07000 splicing factor, arginine/serine-rich 7, putative, expressed FN2102-S Chr5 8849718 G-A 0 0 Single Base Substitution 0 HET FN2102-S Chr6 14092465 14092811 0 0 Inversion 0 FN2102-S Chr6 15482496 15482960 0 0 Deletion 464 HET FN2102-S Chr6 19710245 19710247 0 0 Deletion 2 HET FN2102-S Chr6 4721746 4721764 0 0 Deletion 18 HET FN2102-S Chr6 6707703 6707911 0 0 Inversion 0 FN2102-S Chr6 6707709 6707859 0 0 Inversion 0 FN2102-S Chr6 77180 77182 0 0 Deletion 2 HET FN2102-S Chr6 8778360 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g15460 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2102-S Chr6 8778361 G-T 0 0 Single Base Substitution 0 HET FN2102-S Chr6 9632595 9632866 0 0 Inversion 0 FN2102-S Chr6 9908046 9908048 0 0 Insertion 2 HET FN2102-S Chr7 17955361 A-G 0 0 Single Base Substitution 0 HET FN2102-S Chr7 24085687 24085689 0 0 Deletion 2 HET FN2102-S Chr7 4216854 4216858 0 0 Deletion 4 Homo FN2102-S Chr7 4424618 G-T 0 0 Single Base Substitution 0 HET FN2102-S Chr7 685277 685550 0 0 Inversion 0 FN2102-S Chr7 685277 685550 0 0 Inversion 0 LOC_Os07g02140 flavin-containing monooxygenase family protein, putative, expressed FN2102-S Chr8 10864980 A-C 0 0 Single Base Substitution 0 HET FN2102-S Chr8 10864981 C-G 0 0 Single Base Substitution 0 HET FN2102-S Chr8 1172123 A-G 0 0 Single Base Substitution 0 HET FN2102-S Chr8 18778790 G-A 0 0 Single Base Substitution 0 HET FN2102-S Chr8 23079824 A-G 0 0 Single Base Substitution 0 HET FN2102-S Chr8 24927354 24927461 0 0 Inversion 0 FN2102-S Chr8 9136215 9136217 0 0 Insertion 2 HET FN2102-S Chr8 9515721 C-A 0 0 Single Base Substitution 0 HET FN2102-S Chr9 11454353 T-C 0 0 Single Base Substitution 0 HET FN2102-S Chr9 16673813 T-C 0 0 Single Base Substitution 0 Homo FN2102-S Chr9 21649091 G-A 0 0 Single Base Substitution 0 HET FN2102-S Chr9 3418634 A-C 0 0 Single Base Substitution 0 HET FN2102-S Chr9 4699954 Chr7 27254265 0 Translocation 0 FN2102-S Chr9 6699620 6699651 0 0 Insertion 31 HET FN2102-S Chr9 7057797 7057799 0 0 Insertion 2 HET