FN2109-S Chr1 12496053 A-G 0 0 Single Base Substitution 0 HET FN2109-S Chr1 1251617 G-C 0 0 Single Base Substitution 0 HET FN2109-S Chr1 16256193 16256194 0 0 Insertion 1 HET FN2109-S Chr1 17762618 C-A 0 0 Single Base Substitution 0 Homo FN2109-S Chr1 19153685 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os01g34720 retrotransposon protein, putative, unclassified, expressed FN2109-S Chr1 27874222 27874237 0 0 Deletion 15 Homo FN2109-S Chr10 19708478 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g36810 plus-3 domain containing protein, putative, expressed FN2109-S Chr10 21068466 C-A 0 0 Single Base Substitution 0 HET FN2109-S Chr11 13905738 C-T 0 0 Single Base Substitution 0 Homo FN2109-S Chr11 14042333 14042335 0 0 Deletion 2 Homo FN2109-S Chr11 28759802 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g47600 glycosyl hydrolase, putative, expressed FN2109-S Chr11 6390130 6390133 0 0 Insertion 3 Homo FN2109-S Chr12 13757586 G-C 0 0 Single Base Substitution 0 HET FN2109-S Chr12 15204108 C-G 0 0 Single Base Substitution 0 HET FN2109-S Chr12 15204112 C-A 0 0 Single Base Substitution 0 HET FN2109-S Chr12 15204113 G-T 0 0 Single Base Substitution 0 HET FN2109-S Chr12 16413982 A-T 0 0 Single Base Substitution 0 HET FN2109-S Chr12 18230900 18230901 0 0 Deletion 1 frameshift_variant HET LOC_Os12g30360 transposon protein, putative, unclassified, expressed FN2109-S Chr2 6365214 6365215 0 0 Deletion 1 HET FN2109-S Chr3 11264511 C-A 0 0 Single Base Substitution 0 HET FN2109-S Chr3 14357154 A-T 0 0 Single Base Substitution 0 Homo FN2109-S Chr3 14641870 14641872 0 0 Deletion 2 frameshift_variant HET LOC_Os03g25590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2109-S Chr3 1888895 A-G 0 0 Single Base Substitution 0 HET FN2109-S Chr3 19489490 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g34220 retrotransposon protein, putative, Ty3-gypsy subclass FN2109-S Chr3 25679104 25679193 0 0 Deletion 89 HET FN2109-S Chr4 10553653 C-T 0 0 Single Base Substitution 0 HET FN2109-S Chr4 13227239 T-A 0 0 Single Base Substitution 0 Homo FN2109-S Chr4 13584540 G-T 0 0 Single Base Substitution 0 Homo FN2109-S Chr4 15483799 C-T 0 0 Single Base Substitution 0 Homo FN2109-S Chr4 21137082 21137084 0 0 Insertion 2 HET FN2109-S Chr4 8652921 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g15930 retrotransposon protein, putative, unclassified, expressed FN2109-S Chr5 13573569 G-A 0 0 Single Base Substitution 0 HET FN2109-S Chr5 13573570 G-T 0 0 Single Base Substitution 0 HET FN2109-S Chr5 13573573 T-G 0 0 Single Base Substitution 0 HET FN2109-S Chr5 15642211 15704701 0 0 Inversion 0 FN2109-S Chr5 15642239 15707416 0 0 Inversion 0 FN2109-S Chr6 21694061 21694062 0 0 Deletion 1 HET FN2109-S Chr6 29185188 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g48250 ATPase, putative, expressed FN2109-S Chr6 30027087 G-T 0 0 Single Base Substitution 0 Homo FN2109-S Chr6 30027088 G-A 0 0 Single Base Substitution 0 Homo FN2109-S Chr6 30130238 30130582 0 0 Inversion 0 LOC_Os06g49800 ubiquitin interaction motif family protein, expressed FN2109-S Chr6 4194899 4194911 0 0 Deletion 12 Homo FN2109-S Chr6 9509846 9509857 0 0 Deletion 11 Homo FN2109-S Chr7 10257065 10257410 0 0 Inversion 0 FN2109-S Chr7 106866 106888 0 0 Insertion 22 HET FN2109-S Chr7 13550 C-T 0 0 Single Base Substitution 0 HET FN2109-S Chr7 17216186 T-C 0 0 Single Base Substitution 0 HET FN2109-S Chr7 19446887 19446894 0 0 Deletion 7 HET FN2109-S Chr7 25514381 25514383 0 0 Deletion 2 HET FN2109-S Chr7 27571358 27571361 0 0 Deletion 3 disruptive_inframe_deletion Homo LOC_Os07g46190 pectinesterase, putative, expressed FN2109-S Chr7 8616743 8616746 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os07g15030 retrotransposon protein, putative, unclassified, expressed FN2109-S Chr8 11151033 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g18180 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2109-S Chr8 11892207 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g19850 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed FN2109-S Chr8 12635001 12668000 0 0 Deletion 32999 LOC_Os08g21140 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2109-S Chr8 12635001 12668000 0 0 Deletion 32999 LOC_Os08g21170 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2109-S Chr8 12635001 12668000 0 0 Deletion 32999 LOC_Os08g21180 maSp2a, putative, expressed FN2109-S Chr8 12635001 12668000 0 0 Deletion 32999 LOC_Os08g21190 retrotransposon protein, putative, unclassified FN2109-S Chr8 12635001 12668000 0 0 Deletion 32999 LOC_Os08g21200 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2109-S Chr8 12635001 12668000 0 0 Deletion 32999 LOC_Os08g21210 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2109-S Chr8 12635001 12668000 0 0 Deletion 32999 LOC_Os08g21220 retrotransposon protein, putative, unclassified, expressed FN2109-S Chr8 15293860 C-A 0 0 Single Base Substitution 0 HET FN2109-S Chr8 15992668 G-A 0 0 Single Base Substitution 0 HET FN2109-S Chr9 12073781 T-C 0 0 Single Base Substitution 0 HET FN2109-S Chr9 16554697 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g27220 ATBRXL3/BRX-LIKE3, putative, expressed FN2109-S Chr9 22574971 G-A 0 0 Single Base Substitution 0 HET