FN2125-S Chr1 29338806 29339011 0 0 Inversion 0 FN2125-S Chr1 30982612 G-A 0 0 Single Base Substitution 0 HET FN2125-S Chr1 31738545 31739009 0 0 Inversion 0 LOC_Os01g55170 la domain containing protein, expressed FN2125-S Chr1 38713323 38713539 0 0 Inversion 0 LOC_Os01g66650 expressed protein FN2125-S Chr1 41678315 41678593 0 0 Inversion 0 LOC_Os01g71930 glycosyl hydrolases family 17 protein, expressed FN2125-S Chr1 42689210 A-T 0 0 Single Base Substitution 0 HET FN2125-S Chr1 4442738 4442982 0 0 Inversion 0 FN2125-S Chr10 10177696 10178152 0 0 Inversion 0 FN2125-S Chr10 11780340 11780341 0 0 Deletion 1 Homo FN2125-S Chr10 12868992 12869311 0 0 Inversion 0 LOC_Os10g25000 expressed protein FN2125-S Chr10 13138286 13138287 0 0 Deletion 1 HET FN2125-S Chr10 19068363 19068864 0 0 Inversion 0 FN2125-S Chr11 11408242 11408250 0 0 Deletion 8 HET FN2125-S Chr11 14930136 Chr7 19139293 0 Translocation 0 FN2125-S Chr11 19839683 Chr4 2841952 0 Translocation 0 LOC_Os11g33942 plant protein of unknown function domain containing protein, expressed FN2125-S Chr11 2004814 G-A 0 0 Single Base Substitution 0 Homo FN2125-S Chr11 23838192 G-A 0 0 Single Base Substitution 0 Homo FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g18900 aminotransferase, putative, expressed FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g18910 transposon protein, putative, unclassified, expressed FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g18920 expressed protein FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g18930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g18940 retrotransposon protein, putative, Ty3-gypsy subclass FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g18950 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g18960 integral membrane protein DUF6 containing protein, expressed FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g18970 retrotransposon, putative, centromere-specific, expressed FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g18980 retrotransposon protein, putative, Ty3-gypsy subclass FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g18990 retrotransposon protein, putative, unclassified FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g19000 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g19010 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g19030 copine, putative, expressed FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g19040 expressed protein FN2125-S Chr12 10974001 11081000 0 0 Deletion 106999 LOC_Os12g19080 expressed protein FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19120 transposon protein, putative, unclassified, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19130 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19140 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19170 expressed protein FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19180 ATP binding protein, putative, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19190 transposon protein, putative, CACTA, En/Spm sub-class FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19200 transposon protein, putative, CACTA, En/Spm sub-class FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19210 transposon protein, putative, CACTA, En/Spm sub-class FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19220 transposon protein, putative, CACTA, En/Spm sub-class FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19230 retrotransposon, putative, centromere-specific, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19250 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19260 tetratricopeptide-like helical, putative, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19270 expressed protein FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19280 expressed protein FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19285 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19290 AGC_AGC_other_NDRh_TRCd.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19304 Fe-S metabolism associated domain containing protein, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19320 expressed protein FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19330 expressed protein FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19350 expressed protein FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19370 DNA polymerase I family protein, expressed FN2125-S Chr12 11097001 11283000 0 0 Deletion 185999 LOC_Os12g19381 ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed FN2125-S Chr12 11293001 11332000 0 0 Deletion 38999 LOC_Os12g19440 hypothetical protein FN2125-S Chr12 11293001 11332000 0 0 Deletion 38999 LOC_Os12g19450 retrotransposon protein, putative, unclassified FN2125-S Chr12 11293001 11332000 0 0 Deletion 38999 LOC_Os12g19460 transposon protein, putative, unclassified, expressed FN2125-S Chr12 11293001 11332000 0 0 Deletion 38999 LOC_Os12g19470 ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed FN2125-S Chr12 11293001 11332000 0 0 Deletion 38999 LOC_Os12g19480 retrotransposon, putative, centromere-specific, expressed FN2125-S Chr12 11337001 11407000 0 0 Deletion 69999 LOC_Os12g19510 retrotransposon, putative, centromere-specific, expressed FN2125-S Chr12 11337001 11407000 0 0 Deletion 69999 LOC_Os12g19530 ATP-binding region, ATPase-like domain-containing protein, putative, expressed FN2125-S Chr12 11337001 11407000 0 0 Deletion 69999 LOC_Os12g19549 telomerase reverse transcriptase, putative, expressed FN2125-S Chr12 11337001 11407000 0 0 Deletion 69999 LOC_Os12g19570 retrotransposon protein, putative, Ty3-gypsy subclass FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19580 photosynthetic reaction center protein, putative, expressed FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19590 WD domain, G-beta repeat domain containing protein, expressed FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19600 hypothetical protein FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19630 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19640 retrotransposon protein, putative, Ty3-gypsy subclass FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19650 retrotransposon protein, putative, Ty3-gypsy subclass FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19660 expressed protein FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19670 retrotransposon protein, putative, Ty3-gypsy subclass FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19680 transposon protein, putative, unclassified, expressed FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2125-S Chr12 11415001 11477000 0 0 Deletion 61999 LOC_Os12g19700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2125-S Chr12 11478879 11478881 0 0 Deletion 2 HET FN2125-S Chr12 11733755 G-C 0 0 Single Base Substitution 0 HET FN2125-S Chr12 17641584 C-T 0 0 Single Base Substitution 0 Homo FN2125-S Chr12 26997202 26997640 0 0 Inversion 0 FN2125-S Chr12 26997202 26997640 0 0 Inversion 0 LOC_Os12g43520 cbbY protein-related, putative, expressed FN2125-S Chr12 3563649 A-G 0 0 Single Base Substitution 0 HET FN2125-S Chr12 9179584 9179855 0 0 Inversion 0 LOC_Os12g16080 expressed protein FN2125-S Chr2 16101200 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g27320 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2125-S Chr2 16577430 16577641 0 0 Inversion 0 FN2125-S Chr2 18537925 T-C 0 0 Single Base Substitution 0 HET FN2125-S Chr2 27055819 T-C 0 0 Single Base Substitution 0 HET FN2125-S Chr2 30597803 G-A 0 0 Single Base Substitution 0 Homo FN2125-S Chr2 32443416 G-A 0 0 Single Base Substitution 0 Homo FN2125-S Chr2 34694880 34695325 0 0 Inversion 0 FN2125-S Chr2 8888674 8888675 0 0 Deletion 1 HET FN2125-S Chr3 12004686 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g21080 guanine nucleotide exchange factor, putative, expressed FN2125-S Chr3 14110880 14111237 0 0 Inversion 0 FN2125-S Chr3 14964857 T-C 0 0 Single Base Substitution 0 HET FN2125-S Chr3 24174658 24616405 0 0 Inversion 0 LOC_Os03g43360 zinc finger, C3HC4 type domain containing protein, expressed FN2125-S Chr3 24174658 24616405 0 0 Inversion 0 LOC_Os03g43880 PLA IIIA/PLP7, putative, expressed FN2125-S Chr3 24892152 24892154 0 0 Deletion 2 HET FN2125-S Chr3 27807243 27807664 0 0 Inversion 0 FN2125-S Chr3 31069453 31069732 0 0 Inversion 0 FN2125-S Chr3 3112481 3113040 0 0 Inversion 0 LOC_Os03g06200 aminotransferase, putative, expressed FN2125-S Chr3 32438968 32439092 0 0 Inversion 0 FN2125-S Chr3 34245146 T-A 0 0 Single Base Substitution 0 HET FN2125-S Chr3 34352986 G-A 0 0 Single Base Substitution 0 HET FN2125-S Chr3 3737741 3738098 0 0 Inversion 0 FN2125-S Chr4 14805543 G-A 0 0 Single Base Substitution 0 Homo FN2125-S Chr4 19780001 19853000 0 0 Deletion 72999 LOC_Os04g32790 AP2 domain containing protein, expressed FN2125-S Chr4 19780001 19853000 0 0 Deletion 72999 LOC_Os04g32800 basic proline-rich protein, putative, expressed FN2125-S Chr4 19780001 19853000 0 0 Deletion 72999 LOC_Os04g32810 expressed protein FN2125-S Chr4 19780001 19853000 0 0 Deletion 72999 LOC_Os04g32820 expressed protein FN2125-S Chr4 19780001 19853000 0 0 Deletion 72999 LOC_Os04g32830 expressed protein FN2125-S Chr4 19780001 19853000 0 0 Deletion 72999 LOC_Os04g32840 formin-like protein 20, putative, expressed FN2125-S Chr4 19780001 19853000 0 0 Deletion 72999 LOC_Os04g32850 basic proline-rich protein, putative, expressed FN2125-S Chr4 19780001 19853000 0 0 Deletion 72999 LOC_Os04g32860 expressed protein FN2125-S Chr4 19780001 19853000 0 0 Deletion 72999 LOC_Os04g32870 pentatricopeptide repeat-containing protein, putative, expressed FN2125-S Chr4 19780001 19853000 0 0 Deletion 72999 LOC_Os04g32880 CBS domain containing membrane protein, putative, expressed FN2125-S Chr4 23657729 G-A 0 0 Single Base Substitution 0 HET FN2125-S Chr4 24696392 A-G 0 0 Single Base Substitution 0 HET FN2125-S Chr4 32657498 32657851 0 0 Inversion 0 FN2125-S Chr4 32657498 32657851 0 0 Inversion 0 LOC_Os04g54900 bHLH family protein, putative, expressed FN2125-S Chr4 32682346 32682700 0 0 Inversion 0 FN2125-S Chr4 3418679 3419040 0 0 Inversion 0 LOC_Os04g06510 expressed protein FN2125-S Chr4 611157 611513 0 0 Inversion 0 LOC_Os04g01980 receptor protein kinase, putative, expressed FN2125-S Chr4 7592570 C-A 0 0 Single Base Substitution 0 Homo FN2125-S Chr5 13070896 13071039 0 0 Inversion 0 LOC_Os05g22940 acetyl-CoA carboxylase, putative, expressed FN2125-S Chr5 18674949 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g32050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2125-S Chr5 18733419 18733894 0 0 Inversion 0 LOC_Os05g32130 expressed protein FN2125-S Chr5 20569861 20570352 0 0 Inversion 0 LOC_Os05g34670 KH domain containing protein, putative, expressed FN2125-S Chr5 21006136 21006138 0 0 Insertion 2 HET FN2125-S Chr5 24599069 A-G 0 0 Single Base Substitution 0 HET FN2125-S Chr5 26962100 A-T 0 0 Single Base Substitution 0 HET FN2125-S Chr5 27903408 27903538 0 0 Inversion 0 FN2125-S Chr5 5887740 5887741 0 0 Insertion 1 frameshift_variant HET LOC_Os05g10700 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr5 5972520 5972778 0 0 Inversion 0 LOC_Os05g10810 O-acyltransferase, putative, expressed FN2125-S Chr6 12672722 C-T 0 0 Single Base Substitution 0 Homo FN2125-S Chr6 14557880 G-A 0 0 Single Base Substitution 0 HET FN2125-S Chr6 17652576 T-A 0 0 Single Base Substitution 0 Homo FN2125-S Chr6 17912582 17912866 0 0 Inversion 0 FN2125-S Chr6 21185350 21185768 0 0 Inversion 0 LOC_Os06g36180 amino acid transporter, putative, expressed FN2125-S Chr6 24987614 24987986 0 0 Inversion 0 LOC_Os06g41710 CW-type Zinc Finger, putative, expressed FN2125-S Chr6 27969556 G-A 0 0 Single Base Substitution 0 HET FN2125-S Chr6 28604747 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g47170 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr6 28618916 C-A 0 0 Single Base Substitution 0 HET FN2125-S Chr6 28623725 G-T 0 0 Single Base Substitution 0 HET FN2125-S Chr6 850920 851546 0 0 Inversion 0 LOC_Os06g02460 expressed protein FN2125-S Chr7 14674924 14675305 0 0 Inversion 0 LOC_Os07g25590 decarboxylase, putative, expressed FN2125-S Chr7 14709895 14709897 0 0 Deletion 2 Homo FN2125-S Chr7 17028020 17028021 0 0 Deletion 1 Homo FN2125-S Chr7 22693691 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g37840 lipase, putative, expressed FN2125-S Chr7 23511158 Chr4 24006723 0 Translocation 0 FN2125-S Chr7 23514356 Chr4 24006711 0 Translocation 0 LOC_Os07g39280 transporter-related, putative, expressed FN2125-S Chr7 24431999 T-A 0 0 Single Base Substitution 0 HET FN2125-S Chr7 25239681 25239687 0 0 Insertion 6 HET FN2125-S Chr7 25757361 C-G 0 0 Single Base Substitution 0 HET FN2125-S Chr7 26382121 26382471 0 0 Inversion 0 FN2125-S Chr7 8169146 T-C 0 0 Single Base Substitution 0 Homo FN2125-S Chr7 8437178 G-T 0 0 Single Base Substitution 0 Homo FN2125-S Chr8 21202326 Chr4 18656575 0 Translocation 0 LOC_Os04g31180 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr8 21202326 Chr4 18656575 0 Translocation 0 LOC_Os08g33870 retrotransposon protein, putative, unclassified, expressed FN2125-S Chr8 21647231 21647743 0 0 Inversion 0 LOC_Os08g34500 expressed protein FN2125-S Chr8 22600892 C-T 0 0 Single Base Substitution 0 HET FN2125-S Chr8 25910641 25911043 0 0 Inversion 0 LOC_Os08g40940 expressed protein FN2125-S Chr8 7588655 7588987 0 0 Inversion 0 FN2125-S Chr8 803351 803650 0 0 Inversion 0 FN2125-S Chr8 8315716 8315910 0 0 Inversion 0 FN2125-S Chr9 13805119 C-G 0 0 Single Base Substitution 0 Homo FN2125-S Chr9 16840118 C-A 0 0 Single Base Substitution 0 Homo FN2125-S Chr9 20567852 20567854 0 0 Deletion 2 HET FN2125-S Chr9 21216831 21217094 0 0 Inversion 0 LOC_Os09g36770 NTMC2Type1.2 protein, putative, expressed FN2125-S Chr9 21806677 Chr5 6399610 0 Translocation 0 LOC_Os09g37840 carbohydrate binding protein, putative, expressed FN2125-S Chr9 2220272 2220651 0 0 Inversion 0 LOC_Os09g04210 hydrolase/ zinc ion binding protein, putative, expressed FN2125-S Chr9 7847293 C-T 0 0 Single Base Substitution 0 Homo FN2125-S Chr9 8056600 8056601 0 0 Deletion 1 HET FN2125-S Chr9 9779792 9780179 0 0 Inversion 0 LOC_Os09g16000 NBS-LRR disease resistance protein, putative, expressed