FN2134-S Chr1 12893960 12893964 0 0 Deletion 4 HET FN2134-S Chr1 13040605 T-C 0 0 Single Base Substitution 0 HET FN2134-S Chr1 13452746 G-A 0 0 Single Base Substitution 0 HET FN2134-S Chr1 15344159 15344578 0 0 Inversion 0 FN2134-S Chr1 15344159 15344578 0 0 Inversion 0 LOC_Os01g27480 glutathione S-transferase, putative, expressed FN2134-S Chr1 17362919 T-A 0 0 Single Base Substitution 0 HET FN2134-S Chr1 19010187 19010473 0 0 Inversion 0 LOC_Os01g34480 NAD dependent epimerase/dehydratase family protein, putative, expressed FN2134-S Chr1 27031193 G-A 0 0 Single Base Substitution 0 HET FN2134-S Chr1 29843158 29843398 0 0 Inversion 0 LOC_Os01g51920 phosphotransferase, putative, expressed FN2134-S Chr1 31424212 31424719 0 0 Inversion 0 LOC_Os01g54620 CESA4 - cellulose synthase, expressed FN2134-S Chr1 34824219 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g60220 transposon protein, putative, unclassified, expressed FN2134-S Chr1 37625886 37626296 0 0 Inversion 0 LOC_Os01g64820 POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed FN2134-S Chr1 4022817 4023138 0 0 Inversion 0 FN2134-S Chr1 40443362 40443583 0 0 Inversion 0 LOC_Os01g69940 OsFBX32 - F-box domain containing protein, expressed FN2134-S Chr1 40660723 C-T 0 0 Single Base Substitution 0 Homo FN2134-S Chr1 611375 C-A 0 0 Single Base Substitution 0 HET FN2134-S Chr1 7106587 7106803 0 0 Inversion 0 LOC_Os01g12840 expressed protein FN2134-S Chr1 9721536 G-A 0 0 Single Base Substitution 0 HET FN2134-S Chr10 10043080 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g20020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2134-S Chr10 10646547 A-T 0 0 Single Base Substitution 0 HET FN2134-S Chr10 10721180 A-G 0 0 Single Base Substitution 0 HET FN2134-S Chr10 10765936 10766443 0 0 Inversion 0 FN2134-S Chr10 13238656 13309155 0 0 Inversion 0 FN2134-S Chr10 13240217 13309154 0 0 Inversion 0 FN2134-S Chr10 20005793 T-A 0 0 Single Base Substitution 0 HET FN2134-S Chr10 2054791 2055170 0 0 Inversion 0 LOC_Os10g04342 stripe rust resistance protein Yr10, putative, expressed FN2134-S Chr10 21884479 21884879 0 0 Inversion 0 LOC_Os10g40780 CCR4-Not complex component, Not1domain containing protein, expressed FN2134-S Chr10 3299296 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g06420 retrotransposon protein, putative, unclassified FN2134-S Chr10 3798084 C-G 0 0 Single Base Substitution 0 HET FN2134-S Chr10 4763696 A-C 0 0 Single Base Substitution 0 HET FN2134-S Chr10 6480246 Chr1 17210222 0 Translocation 0 FN2134-S Chr10 6480387 Chr1 17210219 0 Translocation 0 LOC_Os10g11720 retrotransposon protein, putative, unclassified, expressed FN2134-S Chr10 6497194 6497198 0 0 Deletion 4 frameshift_variant HET LOC_Os10g11750 LTPL89 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN2134-S Chr11 13365779 C-T 0 0 Single Base Substitution 0 HET FN2134-S Chr11 14093859 C-G 0 0 Single Base Substitution 0 HET FN2134-S Chr11 16062778 A-T 0 0 Single Base Substitution 0 HET FN2134-S Chr11 17347036 17347038 0 0 Insertion 2 HET FN2134-S Chr11 18476138 Chr10 6480581 0 Translocation 0 FN2134-S Chr11 18476138 Chr10 6480581 0 Translocation 0 LOC_Os10g11720 retrotransposon protein, putative, unclassified, expressed FN2134-S Chr11 18476196 Chr10 6480398 0 Translocation 0 FN2134-S Chr11 18476196 Chr10 6480398 0 Translocation 0 LOC_Os10g11720 retrotransposon protein, putative, unclassified, expressed FN2134-S Chr11 22330150 22330379 0 0 Inversion 0 LOC_Os11g37759 stripe rust resistance protein Yr10, putative, expressed FN2134-S Chr11 24330815 C-A 0 0 Single Base Substitution 0 Homo FN2134-S Chr11 25301395 25301680 0 0 Inversion 0 FN2134-S Chr11 26629087 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g44060 retrotransposon protein, putative, Ty3-gypsy subclass FN2134-S Chr11 28436075 Chr1 27110217 0 Translocation 0 LOC_Os11g47290 receptor kinase, putative, expressed FN2134-S Chr11 28690625 28690813 0 0 Inversion 0 FN2134-S Chr12 10229473 10229897 0 0 Inversion 0 FN2134-S Chr12 15442902 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g26420 retrotransposon protein, putative, unclassified, expressed FN2134-S Chr12 15454599 15454750 0 0 Inversion 0 FN2134-S Chr12 18831911 18832137 0 0 Inversion 0 LOC_Os12g31290 expressed protein FN2134-S Chr12 19318396 T-A 0 0 Single Base Substitution 0 HET FN2134-S Chr12 2932986 2933314 0 0 Inversion 0 LOC_Os12g06180 HVA22, putative, expressed FN2134-S Chr12 3614274 A-G 0 0 Single Base Substitution 0 Homo FN2134-S Chr2 19706535 C-T 0 0 Single Base Substitution 0 HET FN2134-S Chr2 21666373 T-C 0 0 Single Base Substitution 0 HET FN2134-S Chr2 23364222 23364223 0 0 Deletion 1 HET FN2134-S Chr2 29404864 G-A 0 0 Single Base Substitution 0 HET FN2134-S Chr2 30647501 T-A 0 0 Single Base Substitution 0 HET FN2134-S Chr2 32226476 32226485 0 0 Deletion 9 HET FN2134-S Chr2 32614496 T-C 0 0 Single Base Substitution 0 HET FN2134-S Chr2 34045518 34045634 0 0 Inversion 0 LOC_Os02g55590 expressed protein FN2134-S Chr2 35478405 35478548 0 0 Inversion 0 FN2134-S Chr2 4963330 4963331 0 0 Deletion 1 HET FN2134-S Chr3 14742920 14743114 0 0 Inversion 0 FN2134-S Chr3 23318094 23318280 0 0 Inversion 0 LOC_Os03g41960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2134-S Chr3 23941125 C-A 0 0 Single Base Substitution 0 HET FN2134-S Chr3 25141790 C-T 0 0 Single Base Substitution 0 HET FN2134-S Chr3 29580326 29580441 0 0 Inversion 0 FN2134-S Chr3 31661015 C-A 0 0 Single Base Substitution 0 Homo FN2134-S Chr3 32622834 32623150 0 0 Inversion 0 FN2134-S Chr3 36264928 36265213 0 0 Inversion 0 FN2134-S Chr3 4013057 G-A 0 0 Single Base Substitution 0 HET FN2134-S Chr3 4915596 4915597 0 0 Deletion 1 HET FN2134-S Chr3 6855353 6855482 0 0 Inversion 0 LOC_Os03g12790 MATE efflux family protein, putative, expressed FN2134-S Chr4 1433380 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g03340 transposon protein, putative, CACTA, En/Spm sub-class FN2134-S Chr4 16588337 16588549 0 0 Inversion 0 FN2134-S Chr4 17146872 Chr1 17210222 0 Translocation 0 FN2134-S Chr4 1903953 1904251 0 0 Inversion 0 FN2134-S Chr4 24146345 24146486 0 0 Inversion 0 LOC_Os04g40680 expressed protein FN2134-S Chr4 24567123 24567495 0 0 Inversion 0 LOC_Os04g41460 transporter family protein, putative, expressed FN2134-S Chr4 26916154 27166624 0 0 Inversion 0 LOC_Os04g45480 heat shock protein STI, putative, expressed FN2134-S Chr4 27717528 28217191 0 0 Inversion 0 FN2134-S Chr4 27717528 28217191 0 0 Inversion 0 LOC_Os04g47570 protein kinase domain containing protein, expressed FN2134-S Chr4 27717550 27732635 0 0 Inversion 0 FN2134-S Chr4 27717550 27732635 0 0 Inversion 0 LOC_Os04g46780 MSP domain containing protein, expressed FN2134-S Chr4 27718777 28346414 0 0 Inversion 0 FN2134-S Chr4 27719179 28346419 0 0 Inversion 0 FN2134-S Chr4 27732403 28217205 0 0 Inversion 0 FN2134-S Chr4 27732403 28217205 0 0 Inversion 0 LOC_Os04g47570 protein kinase domain containing protein, expressed FN2134-S Chr4 28006309 28217211 0 0 Inversion 0 FN2134-S Chr4 28006309 28217211 0 0 Inversion 0 LOC_Os04g47570 protein kinase domain containing protein, expressed FN2134-S Chr4 30018834 A-T 0 0 Single Base Substitution 0 HET FN2134-S Chr4 30018836 C-T 0 0 Single Base Substitution 0 HET FN2134-S Chr4 34085242 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g57210 actin-6, putative, expressed FN2134-S Chr4 35117212 G-A 0 0 Single Base Substitution 0 HET FN2134-S Chr4 4225103 C-T 0 0 Single Base Substitution 0 HET FN2134-S Chr4 5291001 5326000 0 0 Deletion 34999 LOC_Os04g09860 actin, putative, expressed FN2134-S Chr4 5291001 5326000 0 0 Deletion 34999 LOC_Os04g09870 hypothetical protein FN2134-S Chr4 5291001 5326000 0 0 Deletion 34999 LOC_Os04g09880 expressed protein FN2134-S Chr4 5291001 5326000 0 0 Deletion 34999 LOC_Os04g09900 ent-kaurene synthase, chloroplast precursor, putative, expressed FN2134-S Chr4 5292893 5659872 0 0 Inversion 0 FN2134-S Chr4 5292893 5659872 0 0 Inversion 0 LOC_Os04g10420 CW7, putative, expressed FN2134-S Chr4 5328001 5365000 0 0 Deletion 36999 LOC_Os04g09910 retrotransposon protein, putative, Ty3-gypsy subclass FN2134-S Chr4 5328001 5365000 0 0 Deletion 36999 LOC_Os04g09920 cytochrome P450, putative, expressed FN2134-S Chr4 5328001 5365000 0 0 Deletion 36999 LOC_Os04g09930 retrotransposon protein, putative, unclassified, expressed FN2134-S Chr4 5328001 5365000 0 0 Deletion 36999 LOC_Os04g09940 retrotransposon protein, putative, unclassified FN2134-S Chr4 5328001 5365000 0 0 Deletion 36999 LOC_Os04g09950 hypothetical protein FN2134-S Chr4 5328001 5365000 0 0 Deletion 36999 LOC_Os04g09960 expressed protein FN2134-S Chr4 6545209 G-A 0 0 Single Base Substitution 0 Homo FN2134-S Chr4 8497016 G-A 0 0 Single Base Substitution 0 HET FN2134-S Chr4 8975938 T-C 0 0 Single Base Substitution 0 HET FN2134-S Chr5 10454410 C-T 0 0 Single Base Substitution 0 Homo FN2134-S Chr5 12872723 12872840 0 0 Inversion 0 FN2134-S Chr5 18845086 18845087 0 0 Deletion 1 frameshift_variant Homo LOC_Os05g32320 integral membrane transporter family protein, putative, expressed FN2134-S Chr5 24254100 24254261 0 0 Inversion 0 FN2134-S Chr5 25828223 25828622 0 0 Inversion 0 FN2134-S Chr5 2998650 2998652 0 0 Deletion 2 frameshift_variant HET LOC_Os05g05990 transposon protein, putative, unclassified, expressed FN2134-S Chr5 4655583 G-A 0 0 Single Base Substitution 0 HET FN2134-S Chr6 12753301 12753565 0 0 Inversion 0 FN2134-S Chr6 2370738 2370856 0 0 Inversion 0 LOC_Os06g05250 GTP-binding protein GUF1, putative, expressed FN2134-S Chr6 2838298 2838417 0 0 Inversion 0 LOC_Os06g06130 glutamate receptor, putative, expressed FN2134-S Chr6 28413214 28413395 0 0 Inversion 0 FN2134-S Chr6 2926067 A-C 0 0 Single Base Substitution 0 Homo FN2134-S Chr6 8891126 8932760 0 0 Inversion 0 LOC_Os06g15700 expressed protein FN2134-S Chr6 8891129 8932775 0 0 Inversion 0 LOC_Os06g15700 expressed protein FN2134-S Chr7 13367718 G-A 0 0 Single Base Substitution 0 HET FN2134-S Chr7 17505606 T-A 0 0 Single Base Substitution 0 HET FN2134-S Chr7 19063756 C-T 0 0 Single Base Substitution 0 HET FN2134-S Chr7 20639677 20640019 0 0 Inversion 0 FN2134-S Chr7 22809896 22810283 0 0 Inversion 0 FN2134-S Chr7 2405365 2405374 0 0 Deletion 9 HET FN2134-S Chr7 25483971 A-G 0 0 Single Base Substitution 0 HET FN2134-S Chr7 2970162 2970168 0 0 Deletion 6 HET FN2134-S Chr7 3488748 3489003 0 0 Inversion 0 LOC_Os07g07070 anthranilate phosphoribosyltransferase, putative, expressed FN2134-S Chr7 6787816 6788022 0 0 Inversion 0 FN2134-S Chr7 8440488 Chr4 28001169 0 Translocation 0 FN2134-S Chr8 1471364 1471780 0 0 Inversion 0 LOC_Os08g03180 retrotransposon protein, putative, unclassified, expressed FN2134-S Chr8 1824024 1824178 0 0 Inversion 0 FN2134-S Chr8 18976841 T-A 0 0 Single Base Substitution 0 HET FN2134-S Chr8 27088482 27088497 0 0 Deletion 15 disruptive_inframe_deletion HET LOC_Os08g42840 leucine rich repeat protein, putative, expressed FN2134-S Chr8 2793459 Chr7 3174398 0 Translocation 0 FN2134-S Chr8 28044823 C-T 0 0 Single Base Substitution 0 HET FN2134-S Chr8 3325507 T-C 0 0 Single Base Substitution 0 Homo FN2134-S Chr8 6970840 T-C 0 0 Single Base Substitution 0 Homo FN2134-S Chr8 7885733 T-A 0 0 Single Base Substitution 0 Homo FN2134-S Chr8 7885734 T-A 0 0 Single Base Substitution 0 Homo FN2134-S Chr9 20442409 20538626 0 0 Inversion 0 FN2134-S Chr9 20442409 20538626 0 0 Inversion 0 LOC_Os09g35710 UBX domain-containing protein, putative, expressed FN2134-S Chr9 20442425 20538641 0 0 Inversion 0 FN2134-S Chr9 20442425 20538641 0 0 Inversion 0 LOC_Os09g35710 UBX domain-containing protein, putative, expressed FN2134-S Chr9 4787324 C-T 0 0 Single Base Substitution 0 HET FN2134-S Chr9 5536509 A-T 0 0 Single Base Substitution 0 Homo FN2134-S Chr9 5682872 C-T 0 0 Single Base Substitution 0 HET FN2134-S Chr9 6948274 6948277 0 0 Deletion 3 Homo FN2134-S Chr9 7060859 A-T 0 0 Single Base Substitution 0 Homo FN2134-S Chr9 9221226 9221227 0 0 Deletion 1 frameshift_variant HET LOC_Os09g15190 expressed protein FN2134-S Chr9 9302755 9302758 0 0 Deletion 3 HET