FN2141-S Chr1 11435978 C-G 0 0 Single Base Substitution 0 HET FN2141-S Chr1 11611459 11611605 0 0 Inversion 0 LOC_Os01g20830 heavy metal-associated domain containing protein, expressed FN2141-S Chr1 14428308 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g25450 AIG1 family protein, expressed FN2141-S Chr1 14581344 14581609 0 0 Inversion 0 LOC_Os01g25720 disease resistance protein RGA4, putative, expressed FN2141-S Chr1 15387203 15387212 0 0 Deletion 9 HET FN2141-S Chr1 19922714 C-T 0 0 Single Base Substitution 0 HET FN2141-S Chr1 24890939 24891198 0 0 Inversion 0 FN2141-S Chr1 3188389 3188496 0 0 Inversion 0 FN2141-S Chr1 32263217 G-A 0 0 Single Base Substitution 0 HET FN2141-S Chr1 32477408 32477526 0 0 Inversion 0 LOC_Os01g56360 wax synthase, putative, expressed FN2141-S Chr1 40853364 A-T 0 0 Single Base Substitution 0 Homo FN2141-S Chr1 40853365 A-T 0 0 Single Base Substitution 0 Homo FN2141-S Chr1 41928841 41929119 0 0 Inversion 0 LOC_Os01g72320 FYVE zinc finger domain containing protein, expressed FN2141-S Chr1 4319067 4319183 0 0 Inversion 0 FN2141-S Chr1 43198231 43198459 0 0 Inversion 0 LOC_Os01g74600 vegetative storage protein, putative, expressed FN2141-S Chr1 43223824 C-T 0 0 Single Base Substitution 0 HET FN2141-S Chr1 5268788 G-A 0 0 Single Base Substitution 0 HET FN2141-S Chr1 5554806 A-G 0 0 Single Base Substitution 0 HET FN2141-S Chr1 6901825 6902079 0 0 Inversion 0 LOC_Os01g12540 GTPase of unknown function domain containing protein, putative, expressed FN2141-S Chr1 7586287 7586602 0 0 Inversion 0 FN2141-S Chr1 8120271 8120420 0 0 Inversion 0 LOC_Os01g14490 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr1 8590015 8590122 0 0 Inversion 0 FN2141-S Chr1 9574202 C-T 0 0 Single Base Substitution 0 HET FN2141-S Chr10 15163777 15164008 0 0 Inversion 0 FN2141-S Chr10 15366479 15366684 0 0 Inversion 0 LOC_Os10g29560 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2141-S Chr10 15468601 C-G 0 0 Single Base Substitution 0 Homo FN2141-S Chr10 17662336 T-A 0 0 Single Base Substitution 0 Homo FN2141-S Chr10 18166002 Chr5 28893595 0 Translocation 0 FN2141-S Chr10 18166002 Chr5 28893595 0 Translocation 0 LOC_Os05g50410 Rad21 / Rec8 like protein, putative, expressed FN2141-S Chr10 18176684 Chr5 29288685 0 Translocation 0 FN2141-S Chr10 18176684 Chr5 29288685 0 Translocation 0 LOC_Os05g51030 expressed protein FN2141-S Chr10 18262907 A-T 0 0 Single Base Substitution 0 Homo FN2141-S Chr10 21675972 G-A 0 0 Single Base Substitution 0 HET FN2141-S Chr10 6028899 6029318 0 0 Inversion 0 FN2141-S Chr10 6028899 6029318 0 0 Inversion 0 LOC_Os10g10890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr10 7621583 7621584 0 0 Deletion 1 HET FN2141-S Chr11 14273176 Chr4 22703805 0 Translocation 0 LOC_Os11g25050 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25540 expressed protein FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25550 hypothetical protein FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25560 BHLH transcription factor, putative, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25570 hypothetical protein FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25600 expressed protein FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25610 ZOS11-02 - C2H2 zinc finger protein, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25620 glycine-rich RNA-binding protein 8, putative, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25630 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25640 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25650 retrotransposon protein, putative, unclassified FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25660 retrotransposon protein, putative, Ty3-gypsy subclass FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25680 retrotransposon protein, putative, unclassified FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25690 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25700 tropinone reductase, putative, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25720 cytokinin-N-glucosyltransferase 1, putative, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25740 expressed protein FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25750 expressed protein FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25760 expressed protein FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25770 expressed protein FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25780 PB1 domain containing protein, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25810 retrotransposon protein, putative, Ty1-copia subclass FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25820 retrotransposon protein, putative, unclassified FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25830 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr11 14554001 14732000 0 0 Deletion 177999 LOC_Os11g25840 expressed protein FN2141-S Chr11 15036274 15036275 0 0 Insertion 1 HET FN2141-S Chr11 18916075 18916482 0 0 Inversion 0 FN2141-S Chr11 193257 193643 0 0 Inversion 0 FN2141-S Chr11 22311359 22311609 0 0 Inversion 0 LOC_Os11g37740 stripe rust resistance protein Yr10, putative, expressed FN2141-S Chr11 27672110 G-T 0 0 Single Base Substitution 0 HET FN2141-S Chr11 28563459 28563460 0 0 Deletion 1 HET FN2141-S Chr11 4337949 4338312 0 0 Inversion 0 FN2141-S Chr11 9308387 9308755 0 0 Inversion 0 FN2141-S Chr11 9415692 9416031 0 0 Inversion 0 FN2141-S Chr12 11264588 11264909 0 0 Inversion 0 LOC_Os12g19381 ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed FN2141-S Chr12 13766638 13766875 0 0 Inversion 0 LOC_Os12g24170 beta-galactosidase precursor, putative, expressed FN2141-S Chr12 1654290 A-T 0 0 Single Base Substitution 0 HET FN2141-S Chr12 1848146 1848427 0 0 Inversion 0 FN2141-S Chr12 19215177 19215465 0 0 Inversion 0 FN2141-S Chr12 25554131 25554244 0 0 Inversion 0 LOC_Os12g41210 tesmin/TSO1-like CXC domain containing protein, expressed FN2141-S Chr12 26503993 26504279 0 0 Inversion 0 LOC_Os12g42640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr12 27168226 27168230 0 0 Insertion 4 HET FN2141-S Chr12 2960180 Chr2 11267534 0 Translocation 0 LOC_Os02g19280 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr12 2960180 Chr2 11267534 0 Translocation 0 LOC_Os12g06230 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr12 3959845 3959847 0 0 Insertion 2 HET FN2141-S Chr12 6979954 Chr3 2404531 0 Translocation 0 LOC_Os03g04970 T-complex protein, putative, expressed FN2141-S Chr12 6979954 Chr3 2404531 0 Translocation 0 LOC_Os12g12664 expressed protein FN2141-S Chr2 10014242 10014498 0 0 Inversion 0 FN2141-S Chr2 11547663 11547763 0 0 Inversion 0 LOC_Os02g19730 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr2 124010 124257 0 0 Inversion 0 FN2141-S Chr2 14674461 14674891 0 0 Inversion 0 FN2141-S Chr2 1580857 1581018 0 0 Inversion 0 FN2141-S Chr2 16368610 16368824 0 0 Inversion 0 FN2141-S Chr2 16897272 16897541 0 0 Inversion 0 FN2141-S Chr2 18911419 C-A 0 0 Single Base Substitution 0 HET FN2141-S Chr2 20562876 20562988 0 0 Inversion 0 LOC_Os02g34370 expressed protein FN2141-S Chr2 23462455 23462456 0 0 Insertion 1 HET FN2141-S Chr2 25787042 25787163 0 0 Inversion 0 FN2141-S Chr2 26003883 26004116 0 0 Inversion 0 FN2141-S Chr2 26304188 T-G 0 0 Single Base Substitution 0 Homo FN2141-S Chr2 29023238 29023513 0 0 Inversion 0 LOC_Os02g47500 nodulin, putative, expressed FN2141-S Chr2 5263881 5264291 0 0 Inversion 0 LOC_Os02g10100 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed FN2141-S Chr2 5432616 G-A 0 0 Single Base Substitution 0 HET FN2141-S Chr2 5876128 5876136 0 0 Deletion 8 HET FN2141-S Chr3 11764321 11764574 0 0 Inversion 0 FN2141-S Chr3 14054789 14055065 0 0 Inversion 0 FN2141-S Chr3 22450835 22451365 0 0 Inversion 0 FN2141-S Chr3 23435829 23436107 0 0 Inversion 0 FN2141-S Chr3 23471396 23471560 0 0 Inversion 0 FN2141-S Chr3 25113240 25113607 0 0 Inversion 0 FN2141-S Chr3 29744273 29744274 0 0 Deletion 1 HET FN2141-S Chr3 31180971 G-C 0 0 Single Base Substitution 0 HET FN2141-S Chr3 33364979 33365109 0 0 Inversion 0 LOC_Os03g58590 expressed protein FN2141-S Chr3 4898735 4898925 0 0 Inversion 0 FN2141-S Chr3 531252 531539 0 0 Inversion 0 FN2141-S Chr3 8215452 8215632 0 0 Inversion 0 LOC_Os03g15040 FAR1 family protein, expressed FN2141-S Chr3 8343962 8344328 0 0 Inversion 0 LOC_Os03g15250 lectin-like receptor kinase, putative, expressed FN2141-S Chr4 10551583 C-T 0 0 Single Base Substitution 0 Homo FN2141-S Chr4 12645770 C-T 0 0 Single Base Substitution 0 HET FN2141-S Chr4 13530031 13530468 0 0 Inversion 0 LOC_Os04g23630 expressed protein FN2141-S Chr4 13725722 13726018 0 0 Inversion 0 LOC_Os04g24020 expressed protein FN2141-S Chr4 13906463 Chr3 34098102 0 Translocation 0 LOC_Os04g24274 hypothetical protein FN2141-S Chr4 1444200 1444560 0 0 Inversion 0 LOC_Os04g03360 jacalin-like lectin domain containing protein, expressed FN2141-S Chr4 16607908 16608408 0 0 Inversion 0 FN2141-S Chr4 22558956 22559108 0 0 Inversion 0 LOC_Os04g37930 expressed protein FN2141-S Chr4 23624265 G-T 0 0 Single Base Substitution 0 Homo FN2141-S Chr4 25615062 25615321 0 0 Inversion 0 LOC_Os04g43300 BRCA1 C Terminus domain containing protein, expressed FN2141-S Chr4 29112629 29112641 0 0 Deletion 12 disruptive_inframe_deletion Homo LOC_Os04g48800 GDSL-like lipase/acylhydrolase, putative, expressed FN2141-S Chr4 31644068 31644206 0 0 Inversion 0 LOC_Os04g53120 NB-ARC domain containing protein, expressed FN2141-S Chr4 3468571 3468578 0 0 Deletion 7 frameshift_variant HET LOC_Os04g06590 expressed protein FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26120 expressed protein FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26130 expressed protein FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26140 expressed protein FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26150 hypothetical protein FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26190 retrotransposon protein, putative, Ty3-gypsy subclass FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26194 expressed protein FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26200 transposon protein, putative, unclassified, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26210 ATOFP17/OFP17, putative, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26240 PROLM1 - Prolamin precursor, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26250 PROLM3 - Prolamin precursor, putative, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26280 retrotransposon protein, putative, Ty3-gypsy subclass FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26300 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26340 retrotransposon protein, putative, Ty3-gypsy subclass FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26350 PROLM4 - Prolamin precursor, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26359 PROLM6 - Prolamin precursor, putative, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26368 prolamin precursor, putative, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26377 PROLM9 - Prolamin precursor, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26386 prolamin precursor, putative, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26400 prolamin precursor, putative, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26440 PROLM10 - Prolamin precursor, putative, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26450 retrotransposon protein, putative, unclassified FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26460 PROLM11 - Prolamin precursor, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26480 PROLM12 - Prolamin precursor, putative, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26490 PROLM13 - Prolamin precursor, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26520 transposon protein, putative, unclassified, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26530 retrotransposon protein, putative, Ty3-gypsy subclass FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26540 retrotransposon protein, putative, unclassified FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26550 retrotransposon protein, putative, unclassified FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26560 retrotransposon protein, putative, Ty3-gypsy subclass FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26564 retrotransposon protein, putative, Ty3-gypsy subclass FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26570 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26580 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26590 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26610 expressed protein FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26620 PROLM14 - Prolamin precursor, putative, expressed FN2141-S Chr5 15192001 15473000 0 0 Deletion 280999 LOC_Os05g26630 expressed protein FN2141-S Chr5 16355457 16355646 0 0 Inversion 0 FN2141-S Chr5 17469388 C-T 0 0 Single Base Substitution 0 Homo FN2141-S Chr5 18741269 18741388 0 0 Inversion 0 LOC_Os05g32140 NAD dependent epimerase/dehydratase family protein, putative, expressed FN2141-S Chr5 20151735 C-G 0 0 Single Base Substitution 0 HET FN2141-S Chr5 20557008 G-A 0 0 Single Base Substitution 0 HET FN2141-S Chr5 23869724 23870127 0 0 Inversion 0 FN2141-S Chr5 26617877 26618230 0 0 Inversion 0 LOC_Os05g45930 IQ calmodulin-binding motif family protein, putative, expressed FN2141-S Chr5 28628600 28629026 0 0 Inversion 0 FN2141-S Chr5 28628600 28629026 0 0 Inversion 0 LOC_Os05g49910 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50410 Rad21 / Rec8 like protein, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50420 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50440 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50450 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50460 pentatricopeptide, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50470 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50480 protein of unknown function DUF1296 domain containing protein, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50490 X8 domain containing protein, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50500 secretory protein, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50510 CAS1 domain-containing protein 1 precursor, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50520 retrotransposon protein, putative, unclassified, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50530 hAT dimerisation domain containing protein, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50540 retrotransposon protein, putative, unclassified FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50550 polyprenyl synthetase, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50560 CGMC_MAPKCMGC_2.9 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50570 OsSCP29 - Putative Serine Carboxypeptidase homologue, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50580 OsSCP30 - Putative Serine Carboxypeptidase homologue, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50590 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50600 OsSCP31 - Putative Serine Carboxypeptidase homologue, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50610 WRKY8, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50624 transposon protein, putative, unclassified, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50640 transposon protein, putative, unclassified, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50650 ligA, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50654 mitochondrial import receptor subunit TOM7-1, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50660 PX domain containing protein, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50670 hypothetical protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50680 WRKY83, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50690 pentatricopeptide, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50700 WRKY111, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50710 late embryogenesis abundant protein, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50720 harpin-induced protein 1 domain containing protein, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50730 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50740 transposon protein, putative, unclassified, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50750 AAA family ATPase, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50760 hypothetical protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50770 C4-dicarboxylate transporter/malic acid transport protein, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50780 NBS-LRR resistance-like protein B11, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50790 disease resistance protein, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50800 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50810 CAMK_CAMK_like.5 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50815 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50820 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50830 protein kinase family protein, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50840 mitochondrial carrier protein, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50850 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50860 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50870 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50880 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50890 OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50900 helix-loop-helix DNA-binding protein, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50910 extra-large G-protein-related, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50920 transmembrane amino acid transporter protein, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50930 RNA polymerase sigma factor, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50940 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50950 pentatricopeptide repeat protein PPR986-12, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50960 polygalacturonase, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50970 protein phosphatase 2C, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50980 SET domain containing protein, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g50990 TTL3, putative, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g51000 expressed protein FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g51010 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2141-S Chr5 28888001 29287000 0 0 Deletion 398999 LOC_Os05g51020 leaf senescence related protein, putative, expressed FN2141-S Chr5 29722392 G-T 0 0 Single Base Substitution 0 HET FN2141-S Chr5 29722394 C-T 0 0 Single Base Substitution 0 HET FN2141-S Chr5 5023347 5023368 0 0 Deletion 21 Homo FN2141-S Chr5 771881 772338 0 0 Inversion 0 FN2141-S Chr5 7815942 G-C 0 0 Single Base Substitution 0 Homo FN2141-S Chr5 8880114 8880215 0 0 Inversion 0 LOC_Os05g15720 expressed protein FN2141-S Chr6 10552241 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g18130 retrotransposon protein, putative, LINE subclass, expressed FN2141-S Chr6 11278754 A-T 0 0 Single Base Substitution 0 HET FN2141-S Chr6 11716828 G-C 0 0 Single Base Substitution 0 HET FN2141-S Chr6 13546363 13546825 0 0 Inversion 0 FN2141-S Chr6 15526509 15526834 0 0 Inversion 0 FN2141-S Chr6 17882805 17883008 0 0 Inversion 0 FN2141-S Chr6 21379003 21379156 0 0 Inversion 0 LOC_Os06g36410 hypothetical protein FN2141-S Chr6 22482817 G-T 0 0 Single Base Substitution 0 HET FN2141-S Chr6 6999160 Chr1 11768862 0 Translocation 0 FN2141-S Chr6 7354762 7545437 0 0 Inversion 0 FN2141-S Chr6 7354766 7545455 0 0 Inversion 0 FN2141-S Chr7 11089585 11089863 0 0 Inversion 0 FN2141-S Chr7 12408453 Chr5 3022026 0 Translocation 0 FN2141-S Chr7 13653568 13654067 0 0 Inversion 0 FN2141-S Chr7 13653568 13654067 0 0 Inversion 0 LOC_Os07g24090 mTERF domain containing protein, expressed FN2141-S Chr7 14626561 G-T 0 0 Single Base Substitution 0 Homo FN2141-S Chr7 18316020 18316297 0 0 Inversion 0 FN2141-S Chr7 19044128 T-C 0 0 Single Base Substitution 0 HET FN2141-S Chr7 19156138 C-T 0 0 Single Base Substitution 0 HET FN2141-S Chr7 19902213 19902655 0 0 Inversion 0 FN2141-S Chr7 22674037 22674395 0 0 Inversion 0 LOC_Os07g37810 STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed FN2141-S Chr7 24592940 24593080 0 0 Inversion 0 LOC_Os07g41090 histone deacetylase, putative, expressed FN2141-S Chr7 25041639 25042026 0 0 Inversion 0 LOC_Os07g41800 peroxisome assembly protein, putative, expressed FN2141-S Chr7 28048611 28048828 0 0 Inversion 0 FN2141-S Chr7 4849793 4849973 0 0 Inversion 0 FN2141-S Chr7 510050 510204 0 0 Inversion 0 LOC_Os07g01850 NLI interacting factor-like phosphatase, putative, expressed FN2141-S Chr7 5545863 A-G 0 0 Single Base Substitution 0 Homo FN2141-S Chr7 7742681 7742908 0 0 Inversion 0 FN2141-S Chr8 10993610 10993617 0 0 Deletion 7 frameshift_variant HET LOC_Os08g17920 retrotransposon, putative, centromere-specific FN2141-S Chr8 15572037 15572178 0 0 Inversion 0 LOC_Os08g25590 UPF0041 domain containing protein, putative, expressed FN2141-S Chr8 1568444 1568759 0 0 Inversion 0 LOC_Os08g03360 ATBET9, putative, expressed FN2141-S Chr8 23534273 A-C 0 0 Single Base Substitution 0 Homo FN2141-S Chr8 3281047 3281209 0 0 Inversion 0 FN2141-S Chr8 3281047 3281209 0 0 Inversion 0 LOC_Os08g06010 transporter, major facilitator family, putative, expressed FN2141-S Chr8 9337612 9337873 0 0 Inversion 0 FN2141-S Chr9 13812883 13813325 0 0 Inversion 0 FN2141-S Chr9 14030946 14031276 0 0 Inversion 0 LOC_Os09g23620 MYB family transcription factor, putative, expressed FN2141-S Chr9 14800285 14800516 0 0 Inversion 0 FN2141-S Chr9 15456783 15457132 0 0 Inversion 0 FN2141-S Chr9 9457326 Chr8 23929983 0 Translocation 0 FN2141-S Chr9 9457326 Chr8 23929983 0 Translocation 0 LOC_Os08g37780 NOL1/NOP2/sun family protein, putative, expressed FN2141-S Chr9 9871436 Chr8 23930248 0 Translocation 0 FN2141-S Chr9 9871436 Chr8 23930248 0 Translocation 0 LOC_Os08g37780 NOL1/NOP2/sun family protein, putative, expressed