FN2142-S Chr1 11090023 11090311 0 0 Inversion 0 LOC_Os01g19548 pentatricopeptide, putative, expressed FN2142-S Chr1 12033484 G-C 0 0 Single Base Substitution 0 HET FN2142-S Chr1 14842177 14842181 0 0 Deletion 4 HET FN2142-S Chr1 20955243 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g37510 peptide deformylase, putative, expressed FN2142-S Chr1 24094948 T-C 0 0 Single Base Substitution 0 HET FN2142-S Chr1 32712933 T-A 0 0 Single Base Substitution 0 HET FN2142-S Chr1 41166427 41166741 0 0 Inversion 0 LOC_Os01g71130 xylanase inhibitor 725OS, putative, expressed FN2142-S Chr1 41862550 41862689 0 0 Inversion 0 LOC_Os01g72190 expressed protein FN2142-S Chr1 424637 425054 0 0 Inversion 0 LOC_Os01g01800 expressed protein FN2142-S Chr1 6842197 6842551 0 0 Inversion 0 LOC_Os01g12480 expressed protein FN2142-S Chr1 9593435 9593797 0 0 Inversion 0 FN2142-S Chr10 1078041 1078506 0 0 Inversion 0 LOC_Os10g02740 retrotransposon protein, putative, unclassified, expressed FN2142-S Chr10 11268834 C-T 0 0 Single Base Substitution 0 HET FN2142-S Chr10 12252928 T-G 0 0 Single Base Substitution 0 HET FN2142-S Chr10 14176631 14177199 0 0 Inversion 0 FN2142-S Chr10 15471883 Chr7 22106137 0 Translocation 0 FN2142-S Chr10 15472085 Chr7 22106131 0 Translocation 0 FN2142-S Chr10 19171257 19171674 0 0 Inversion 0 FN2142-S Chr10 22905633 G-T 0 0 Single Base Substitution 0 Homo FN2142-S Chr10 3329834 A-C 0 0 Single Base Substitution 0 Homo FN2142-S Chr10 3329838 T-A 0 0 Single Base Substitution 0 Homo FN2142-S Chr10 3806106 3806114 0 0 Insertion 8 HET FN2142-S Chr10 467829 Chr1 30237136 0 Translocation 0 FN2142-S Chr10 7362075 Chr6 10381237 0 Translocation 0 FN2142-S Chr10 8759806 8759913 0 0 Inversion 0 LOC_Os10g17380 retrotransposon protein, putative, unclassified FN2142-S Chr11 11809048 11809537 0 0 Inversion 0 LOC_Os11g20400 retrotransposon protein, putative, unclassified, expressed FN2142-S Chr11 12720352 Chr3 6152897 0 Translocation 0 LOC_Os03g11760 polygalacturonase, putative, expressed FN2142-S Chr11 12720352 Chr3 6152897 0 Translocation 0 LOC_Os11g22160 retrotransposon protein, putative, unclassified, expressed FN2142-S Chr11 12720695 Chr3 6149996 0 Translocation 0 LOC_Os11g22160 retrotransposon protein, putative, unclassified, expressed FN2142-S Chr11 15323452 T-A 0 0 Single Base Substitution 0 HET FN2142-S Chr11 16791085 16791428 0 0 Inversion 0 FN2142-S Chr11 17624002 C-G 0 0 Single Base Substitution 0 HET FN2142-S Chr11 19480513 19480749 0 0 Inversion 0 FN2142-S Chr11 19735588 Chr5 2392225 0 Translocation 0 FN2142-S Chr11 20522336 20523101 0 0 Inversion 0 LOC_Os11g35030 growth regulating factor protein, putative, expressed FN2142-S Chr11 22388538 22388550 0 0 Insertion 12 HET FN2142-S Chr11 24629914 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g41110 transposon protein, putative, Ac/Ds sub-class, expressed FN2142-S Chr11 24900109 24900308 0 0 Inversion 0 LOC_Os11g41520 hypothetical protein FN2142-S Chr11 5107201 Chr8 3855213 0 Translocation 0 LOC_Os11g09530 retrotransposon protein, putative, unclassified, expressed FN2142-S Chr11 6663033 6663037 0 0 Insertion 4 HET FN2142-S Chr11 8020254 8020387 0 0 Inversion 0 LOC_Os11g14300 la domain containing protein, expressed FN2142-S Chr11 8791394 8791529 0 0 Inversion 0 LOC_Os11g15520 OsSub62 - Putative Subtilisin homologue, expressed FN2142-S Chr12 12784092 12784208 0 0 Inversion 0 LOC_Os12g22620 endonuclease/Exonuclease/phosphatase family protein, expressed FN2142-S Chr12 14239240 14239532 0 0 Inversion 0 FN2142-S Chr12 18616684 Chr5 6798102 0 Translocation 0 FN2142-S Chr12 20240099 20240100 0 0 Deletion 1 HET FN2142-S Chr12 21760065 21760067 0 0 Insertion 2 HET FN2142-S Chr12 22023465 Chr8 27373387 0 Translocation 0 FN2142-S Chr12 22319737 22319818 0 0 Deletion 81 HET FN2142-S Chr12 2990343 2990650 0 0 Inversion 0 LOC_Os12g06270 retrotransposon protein, putative, unclassified, expressed FN2142-S Chr12 3751589 C-T 0 0 Single Base Substitution 0 Homo FN2142-S Chr2 10158877 10159084 0 0 Inversion 0 LOC_Os02g17650 tocopherol cyclase, chloroplast precursor, putative, expressed FN2142-S Chr2 19517941 C-T 0 0 Single Base Substitution 0 HET FN2142-S Chr2 21339428 G-A 0 0 Single Base Substitution 0 HET FN2142-S Chr2 30787516 T-C 0 0 Single Base Substitution 0 HET FN2142-S Chr2 6478412 6478598 0 0 Inversion 0 LOC_Os02g12420 receptor-like protein kinase precursor, putative, expressed FN2142-S Chr2 9976764 9977305 0 0 Inversion 0 LOC_Os02g17350 VHS and GAT domain containing protein, expressed FN2142-S Chr3 10505702 C-T 0 0 Single Base Substitution 0 Homo FN2142-S Chr3 16828236 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g29520 retrotransposon protein, putative, unclassified, expressed FN2142-S Chr3 17852713 G-T 0 0 Single Base Substitution 0 HET FN2142-S Chr3 2467051 Chr2 27134605 0 Translocation 0 LOC_Os02g44810 tRNA pseudouridine synthase family protein, putative, expressed FN2142-S Chr3 2467051 Chr2 27134605 0 Translocation 0 LOC_Os03g05060 exostosin family domain containing protein, expressed FN2142-S Chr3 2467063 Chr2 27133945 0 Translocation 0 LOC_Os03g05060 exostosin family domain containing protein, expressed FN2142-S Chr3 30396911 30397012 0 0 Inversion 0 LOC_Os03g53000 XRCC4, putative, expressed FN2142-S Chr4 1318296 C-A 0 0 Single Base Substitution 0 HET FN2142-S Chr4 17888432 18052674 0 0 Inversion 0 LOC_Os04g29990 OsWAK44 - OsWAK receptor-like protein kinase, expressed FN2142-S Chr4 20756980 20756981 0 0 Deletion 1 HET FN2142-S Chr4 20833084 C-A 0 0 Single Base Substitution 0 Homo FN2142-S Chr4 21755011 21755025 0 0 Deletion 14 Homo FN2142-S Chr4 21778745 A-G 0 0 Single Base Substitution 0 HET FN2142-S Chr4 25111554 25112042 0 0 Inversion 0 LOC_Os04g42430 EF hand family protein, putative, expressed FN2142-S Chr4 30274576 30274767 0 0 Inversion 0 LOC_Os04g51120 ENTH domain containing protein, expressed FN2142-S Chr4 3211659 T-C 0 0 Single Base Substitution 0 HET FN2142-S Chr4 5846620 5846936 0 0 Inversion 0 LOC_Os04g10750 inorganic phosphate transporter, putative, expressed FN2142-S Chr4 7730717 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g13860 retrotransposon protein, putative, Ty3-gypsy subclass FN2142-S Chr5 1011121 1011470 0 0 Inversion 0 LOC_Os05g02810 protein binding protein, putative, expressed FN2142-S Chr5 1110863 1111248 0 0 Inversion 0 FN2142-S Chr5 14654022 14654236 0 0 Inversion 0 FN2142-S Chr5 18585244 18585538 0 0 Inversion 0 FN2142-S Chr5 24188161 24188562 0 0 Inversion 0 LOC_Os05g41290 disease resistance RPP13-like protein 1, putative, expressed FN2142-S Chr5 27759996 27760401 0 0 Inversion 0 LOC_Os05g48416 lipase-related, putative, expressed FN2142-S Chr5 29523205 29523436 0 0 Inversion 0 LOC_Os05g51490 SIT4 phosphatase-associated protein domain containing protein, expressed FN2142-S Chr6 12277015 12277485 0 0 Inversion 0 FN2142-S Chr6 1427027 1427322 0 0 Inversion 0 LOC_Os06g03660 peroxisomal biogenesis factor 11, putative, expressed FN2142-S Chr6 20321735 20321737 0 0 Insertion 2 HET FN2142-S Chr6 25547398 25547400 0 0 Deletion 2 HET FN2142-S Chr6 27170394 27170396 0 0 Deletion 2 HET FN2142-S Chr6 27607057 A-C 0 0 Single Base Substitution 0 Homo FN2142-S Chr6 4466493 4466799 0 0 Inversion 0 FN2142-S Chr6 6549137 6549346 0 0 Inversion 0 FN2142-S Chr6 6561574 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g12220 HVA22, putative, expressed FN2142-S Chr6 7844234 7844545 0 0 Inversion 0 LOC_Os06g14060 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN2142-S Chr7 11077853 Chr4 29420442 0 Translocation 0 FN2142-S Chr7 11077853 Chr4 29420442 0 Translocation 0 LOC_Os04g49290 retrotransposon protein, putative, unclassified, expressed FN2142-S Chr7 11618009 11618193 0 0 Inversion 0 FN2142-S Chr7 16779292 16779591 0 0 Inversion 0 FN2142-S Chr7 20219591 G-A 0 0 Single Base Substitution 0 HET FN2142-S Chr7 20977021 T-A 0 0 Single Base Substitution 0 HET FN2142-S Chr7 27999675 T-C 0 0 Single Base Substitution 0 Homo FN2142-S Chr7 9359689 9359690 0 0 Deletion 1 frameshift_variant Homo LOC_Os07g16054 hypothetical protein FN2142-S Chr8 11448263 11448454 0 0 Inversion 0 LOC_Os08g19140 adenylate kinase family protein, putative, expressed FN2142-S Chr8 15015619 Chr6 14816504 0 Translocation 0 LOC_Os08g24810 expressed protein FN2142-S Chr8 16385243 Chr7 15520214 0 Translocation 0 FN2142-S Chr8 16832934 16832936 0 0 Insertion 2 HET FN2142-S Chr8 19033267 G-A 0 0 Single Base Substitution 0 Homo FN2142-S Chr8 19033269 G-T 0 0 Single Base Substitution 0 Homo FN2142-S Chr8 19033270 G-T 0 0 Single Base Substitution 0 Homo FN2142-S Chr8 20764814 20764816 0 0 Deletion 2 HET FN2142-S Chr8 6616637 6616642 0 0 Deletion 5 HET FN2142-S Chr9 10900226 T-C 0 0 Single Base Substitution 0 HET FN2142-S Chr9 11104043 11104044 0 0 Deletion 1 HET FN2142-S Chr9 1382629 Chr8 9939475 0 Translocation 0 LOC_Os08g16280 retrotransposon protein, putative, unclassified, expressed FN2142-S Chr9 1382629 Chr8 9939475 0 Translocation 0 LOC_Os09g02950 retrotransposon protein, putative, unclassified, expressed FN2142-S Chr9 13945952 A-G 0 0 Single Base Substitution 0 HET FN2142-S Chr9 15815397 A-T 0 0 Single Base Substitution 0 HET FN2142-S Chr9 19260416 19260662 0 0 Inversion 0 LOC_Os09g32270 expressed protein FN2142-S Chr9 1973138 1973139 0 0 Insertion 1 HET FN2142-S Chr9 4173903 C-T 0 0 Single Base Substitution 0 HET FN2142-S Chr9 5374723 5374724 0 0 Deletion 1 frameshift_variant HET LOC_Os09g09880 transposon protein, putative, CACTA, En/Spm sub-class FN2142-S Chr9 702402 702420 0 0 Deletion 18 Homo