FN2152-S Chr1 10631644 10631645 0 0 Deletion 1 HET FN2152-S Chr1 11222885 T-G 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR HET LOC_Os01g19770 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed FN2152-S Chr1 23145025 23145026 0 0 Insertion 1 HET FN2152-S Chr1 25249683 25249953 0 0 Inversion 0 FN2152-S Chr1 27809054 27809055 0 0 Insertion 1 HET FN2152-S Chr1 29835432 C-A 0 0 Single Base Substitution 0 Homo FN2152-S Chr1 34900164 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g60330 inactive receptor kinase At2g26730 precursor, putative, expressed FN2152-S Chr1 35792176 35792179 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os01g61860 TBC domain containing protein, expressed FN2152-S Chr1 41407001 41424000 0 0 Deletion 16999 LOC_Os01g71510 transposon protein, putative, unclassified, expressed FN2152-S Chr1 41407001 41424000 0 0 Deletion 16999 LOC_Os01g71520 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr1 9032805 9032806 0 0 Deletion 1 HET FN2152-S Chr10 12950318 Chr8 14202216 0 Translocation 0 FN2152-S Chr10 13405001 13421000 0 0 Deletion 15999 LOC_Os10g25880 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr10 13405001 13421000 0 0 Deletion 15999 LOC_Os10g25890 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr10 14180847 Chr1 26307386 0 Translocation 0 FN2152-S Chr10 3545001 3617000 0 0 Deletion 71999 LOC_Os10g06810 expressed protein FN2152-S Chr10 3545001 3617000 0 0 Deletion 71999 LOC_Os10g06820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2152-S Chr10 3545001 3617000 0 0 Deletion 71999 LOC_Os10g06830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2152-S Chr10 3545001 3617000 0 0 Deletion 71999 LOC_Os10g06840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2152-S Chr10 3545001 3617000 0 0 Deletion 71999 LOC_Os10g06860 FAR1 family protein FN2152-S Chr10 3545001 3617000 0 0 Deletion 71999 LOC_Os10g06890 zinc finger, SWIM-type, putative, expressed FN2152-S Chr10 3545001 3617000 0 0 Deletion 71999 LOC_Os10g06900 expressed protein FN2152-S Chr10 3545001 3617000 0 0 Deletion 71999 LOC_Os10g06910 expressed protein FN2152-S Chr10 3545001 3617000 0 0 Deletion 71999 LOC_Os10g06920 expressed protein FN2152-S Chr10 3545001 3617000 0 0 Deletion 71999 LOC_Os10g06930 mitogen-activated protein kinase 15, putative, expressed FN2152-S Chr10 9144888 9144889 0 0 Insertion 1 frameshift_variant HET LOC_Os10g18042 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2152-S Chr11 12069463 12069464 0 0 Deletion 1 HET FN2152-S Chr11 13493795 13493796 0 0 Insertion 1 HET FN2152-S Chr11 14589444 Chr4 8131957 0 Translocation 0 FN2152-S Chr11 14589444 Chr4 8131957 0 Translocation 0 LOC_Os04g14520 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr11 15979548 G-A 0 0 Single Base Substitution 0 HET FN2152-S Chr11 19220031 Chr9 8149217 0 Translocation 0 FN2152-S Chr11 22131407 Chr7 11905199 0 Translocation 0 FN2152-S Chr11 27827160 Chr6 25898014 0 Translocation 0 FN2152-S Chr11 3282349 T-C 0 0 Single Base Substitution 0 HET FN2152-S Chr11 8758810 8938868 0 0 Inversion 0 LOC_Os11g15450 retrotransposon protein, putative, unclassified FN2152-S Chr11 8758810 8938868 0 0 Inversion 0 LOC_Os11g16248 retrotransposon protein, putative, LINE subclass, expressed FN2152-S Chr12 11509869 11509870 0 0 Deletion 1 HET FN2152-S Chr12 16504747 16505102 0 0 Inversion 0 LOC_Os12g27994 expressed protein FN2152-S Chr12 16938190 16938192 0 0 Deletion 2 frameshift_variant HET LOC_Os12g28650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2152-S Chr12 25692196 25692200 0 0 Deletion 4 HET FN2152-S Chr12 6215582 Chr2 1697509 0 Translocation 0 FN2152-S Chr12 7124001 7168000 0 0 Deletion 43999 LOC_Os12g12880 expressed protein FN2152-S Chr12 7124001 7168000 0 0 Deletion 43999 LOC_Os12g12900 hypothetical protein FN2152-S Chr12 7124001 7168000 0 0 Deletion 43999 LOC_Os12g12910 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr12 7124001 7168000 0 0 Deletion 43999 LOC_Os12g12920 hypothetical protein FN2152-S Chr12 7124001 7168000 0 0 Deletion 43999 LOC_Os12g12934 peptide transporter PTR3-A, putative, expressed FN2152-S Chr12 9229235 9229236 0 0 Insertion 1 HET FN2152-S Chr12 9802786 Chr10 20738719 0 Translocation 0 FN2152-S Chr2 19073093 19073394 0 0 Inversion 0 FN2152-S Chr2 32700585 32700704 0 0 Inversion 0 LOC_Os02g53450 expressed protein FN2152-S Chr3 10719001 10743000 0 0 Deletion 23999 LOC_Os03g19140 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr3 10719001 10743000 0 0 Deletion 23999 LOC_Os03g19150 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr3 10719001 10743000 0 0 Deletion 23999 LOC_Os03g19160 transposon protein, putative, unclassified, expressed FN2152-S Chr3 10745204 10745205 0 0 Insertion 1 HET FN2152-S Chr3 12433111 C-T 0 0 Single Base Substitution 0 HET FN2152-S Chr3 12858565 Chr2 27027477 0 Translocation 0 LOC_Os02g44599 expressed protein FN2152-S Chr3 12858565 Chr2 27027477 0 Translocation 0 LOC_Os03g22430 OsClp5 - Putative Clp protease homologue, expressed FN2152-S Chr3 14126142 14126143 0 0 Insertion 1 HET FN2152-S Chr3 17136806 Chr2 24543571 0 Translocation 0 FN2152-S Chr3 21449338 G-A 0 0 Single Base Substitution 0 HET FN2152-S Chr3 28608197 28608199 0 0 Deletion 2 HET FN2152-S Chr3 31521165 31521417 0 0 Inversion 0 FN2152-S Chr3 3222577 3222578 0 0 Insertion 1 HET FN2152-S Chr3 32411001 32422000 0 0 Deletion 10999 LOC_Os03g56910 retrotransposon protein, putative, LINE subclass, expressed FN2152-S Chr3 32411001 32422000 0 0 Deletion 10999 LOC_Os03g56920 expressed protein FN2152-S Chr4 15320793 15320794 0 0 Insertion 1 HET FN2152-S Chr4 24712352 C-T 0 0 Single Base Substitution 0 HET FN2152-S Chr4 2898224 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g05670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2152-S Chr4 32084501 32209635 0 0 Inversion 0 FN2152-S Chr4 32084501 32209635 0 0 Inversion 0 LOC_Os04g54050 retrotransposon protein, putative, unclassified FN2152-S Chr4 5447379 5447380 0 0 Insertion 1 HET FN2152-S Chr4 6031001 6041000 0 0 Deletion 9999 LOC_Os04g11080 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr4 6031001 6041000 0 0 Deletion 9999 LOC_Os04g11090 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr4 8143986 8144007 0 0 Insertion 21 HET FN2152-S Chr5 11016069 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g18980 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2152-S Chr5 18271869 Chr4 28907055 0 Translocation 0 FN2152-S Chr5 18369178 18369180 0 0 Insertion 2 HET FN2152-S Chr5 20654989 Chr1 40847961 0 Translocation 0 FN2152-S Chr5 20654989 Chr1 40847961 0 Translocation 0 LOC_Os01g70520 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed FN2152-S Chr5 20669340 Chr1 40847958 0 Translocation 0 FN2152-S Chr5 20669340 Chr1 40847958 0 Translocation 0 LOC_Os01g70520 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed FN2152-S Chr5 20750746 20750750 0 0 Deletion 4 frameshift_variant Homo LOC_Os05g34920 expressed protein FN2152-S Chr5 21256368 21256369 0 0 Deletion 1 Homo FN2152-S Chr5 27171128 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g46954 expressed protein FN2152-S Chr5 378001 400000 0 0 Deletion 21999 LOC_Os05g01635 expressed protein FN2152-S Chr5 378001 400000 0 0 Deletion 21999 LOC_Os05g01640 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr5 378001 400000 0 0 Deletion 21999 LOC_Os05g01650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2152-S Chr5 378001 400000 0 0 Deletion 21999 LOC_Os05g01660 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr5 378001 400000 0 0 Deletion 21999 LOC_Os05g01670 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr5 4954614 Chr4 857584 0 Translocation 0 FN2152-S Chr5 9483217 9483235 0 0 Insertion 18 inframe_insertion HET LOC_Os05g16680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2152-S Chr6 24069430 A-C 0 0 Single Base Substitution 0 Homo FN2152-S Chr6 26660957 A-G 0 0 Single Base Substitution 0 HET FN2152-S Chr6 27175001 27198000 0 0 Deletion 22999 LOC_Os06g44940 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr6 27175001 27198000 0 0 Deletion 22999 LOC_Os06g44950 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr6 27175001 27198000 0 0 Deletion 22999 LOC_Os06g44960 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr6 4244184 Chr2 6526410 0 Translocation 0 FN2152-S Chr6 634635 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g02130 G-protein alpha subunit, putative, expressed FN2152-S Chr6 7102472 7102479 0 0 Deletion 7 HET FN2152-S Chr6 7179348 C-A 0 0 Single Base Substitution 0 Homo FN2152-S Chr6 8530001 8551000 0 0 Deletion 20999 LOC_Os06g15050 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2152-S Chr6 8530001 8551000 0 0 Deletion 20999 LOC_Os06g15060 transposon protein, putative, CACTA, En/Spm sub-class FN2152-S Chr6 8530001 8551000 0 0 Deletion 20999 LOC_Os06g15070 retrotransposon protein, putative, Ty3-gypsy subclass FN2152-S Chr7 12486198 12486200 0 0 Insertion 2 HET FN2152-S Chr7 14289804 G-A 0 0 Single Base Substitution 0 HET FN2152-S Chr7 15467387 15467388 0 0 Insertion 1 HET FN2152-S Chr7 17320556 17320557 0 0 Insertion 1 frameshift_variant HET LOC_Os07g29500 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr7 18369001 18405000 0 0 Deletion 35999 LOC_Os07g31020 hypothetical protein FN2152-S Chr7 18369001 18405000 0 0 Deletion 35999 LOC_Os07g31030 hypothetical protein FN2152-S Chr7 18369001 18405000 0 0 Deletion 35999 LOC_Os07g31040 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr7 18369001 18405000 0 0 Deletion 35999 LOC_Os07g31050 retrotransposon protein, putative, unclassified FN2152-S Chr7 18369001 18405000 0 0 Deletion 35999 LOC_Os07g31060 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr7 18369001 18405000 0 0 Deletion 35999 LOC_Os07g31070 expressed protein FN2152-S Chr7 18369001 18405000 0 0 Deletion 35999 LOC_Os07g31080 transposon protein, putative, CACTA, En/Spm sub-class FN2152-S Chr7 21905176 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g36610 CSLF9 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed FN2152-S Chr7 6663831 C-T 0 0 Single Base Substitution 0 HET FN2152-S Chr8 12519489 T-G 0 0 Single Base Substitution 0 Homo FN2152-S Chr8 13029536 13029543 0 0 Deletion 7 Homo FN2152-S Chr8 1873001 1897000 0 0 Deletion 23999 LOC_Os08g03930 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr8 1873001 1897000 0 0 Deletion 23999 LOC_Os08g03940 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr8 1873001 1897000 0 0 Deletion 23999 LOC_Os08g03950 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr8 1873001 1897000 0 0 Deletion 23999 LOC_Os08g03960 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr8 1873001 1897000 0 0 Deletion 23999 LOC_Os08g03970 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr8 19804265 Chr7 1870478 0 Translocation 0 LOC_Os08g31940 expressed protein FN2152-S Chr8 23298558 23298589 0 0 Insertion 31 HET FN2152-S Chr8 24362510 24362511 0 0 Insertion 1 HET FN2152-S Chr8 781993 782010 0 0 Deletion 17 HET FN2152-S Chr8 782223 A-G 0 0 Single Base Substitution 0 Homo FN2152-S Chr9 13150340 Chr4 13523968 0 Translocation 0 FN2152-S Chr9 13150340 Chr4 13523968 0 Translocation 0 LOC_Os04g23620 D-mannose binding lectin family protein, expressed FN2152-S Chr9 13150371 Chr4 13439748 0 Translocation 0 FN2152-S Chr9 21371763 21372153 0 0 Inversion 0 LOC_Os09g37050 RING-H2 finger protein ATL2B, putative, expressed FN2152-S Chr9 22825001 22844000 0 0 Deletion 18999 LOC_Os09g39820 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr9 22825001 22844000 0 0 Deletion 18999 LOC_Os09g39830 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr9 22825001 22844000 0 0 Deletion 18999 LOC_Os09g39840 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr9 685001 706000 0 0 Deletion 20999 LOC_Os09g01980 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr9 685001 706000 0 0 Deletion 20999 LOC_Os09g01990 retrotransposon protein, putative, unclassified, expressed FN2152-S Chr9 685001 706000 0 0 Deletion 20999 LOC_Os09g02000 expressed protein FN2152-S Chr9 685001 706000 0 0 Deletion 20999 LOC_Os09g02010 expressed protein FN2152-S Chr9 685001 706000 0 0 Deletion 20999 LOC_Os09g02020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2152-S Chr9 9739410 9739675 0 0 Inversion 0