FN2157-S Chr1 10270725 10270727 0 0 Deletion 2 Homo FN2157-S Chr1 12497700 12497885 0 0 Inversion 0 FN2157-S Chr1 13850172 C-A 0 0 Single Base Substitution 0 Homo FN2157-S Chr1 18272074 18272075 0 0 Insertion 1 HET FN2157-S Chr1 3177992 3178388 0 0 Inversion 0 LOC_Os01g06720 disease resistance protein SlVe2 precursor, putative, expressed FN2157-S Chr1 3352719 3353044 0 0 Inversion 0 LOC_Os01g07110 BRCA2 repeat family protein, expressed FN2157-S Chr1 36505001 36526000 0 0 Deletion 20999 LOC_Os01g63030 transposon protein, putative, unclassified, expressed FN2157-S Chr1 36505001 36526000 0 0 Deletion 20999 LOC_Os01g63040 expressed protein FN2157-S Chr1 37346415 37346418 0 0 Insertion 3 HET FN2157-S Chr1 4457184 4457404 0 0 Inversion 0 FN2157-S Chr1 611133 611145 0 0 Deletion 12 Homo FN2157-S Chr1 6463001 6473000 0 0 Deletion 9999 LOC_Os01g11910 basic helix-loop-helix, putative, expressed FN2157-S Chr1 6463001 6473000 0 0 Deletion 9999 LOC_Os01g11920 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr1 9459968 9459984 0 0 Deletion 16 Homo FN2157-S Chr10 13402131 13552387 0 0 Inversion 0 LOC_Os10g25850 nuclear transcription factor Y subunit, putative, expressed FN2157-S Chr10 1912240 G-A 0 0 Single Base Substitution 0 HET FN2157-S Chr10 22444845 22449576 0 0 Inversion 0 FN2157-S Chr10 4614010 Chr6 10862726 0 Translocation 0 LOC_Os10g08510 hypothetical protein FN2157-S Chr11 10572591 10572592 0 0 Deletion 1 Homo FN2157-S Chr11 13220749 Chr5 29713108 0 Translocation 0 FN2157-S Chr11 13675632 13675633 0 0 Deletion 1 Homo FN2157-S Chr11 14600982 14600983 0 0 Deletion 1 Homo FN2157-S Chr11 15818001 15840000 0 0 Deletion 21999 LOC_Os11g27500 transposon protein, putative, CACTA, En/Spm sub-class FN2157-S Chr11 15818001 15840000 0 0 Deletion 21999 LOC_Os11g27510 transposon protein, putative, CACTA, En/Spm sub-class FN2157-S Chr11 15818001 15840000 0 0 Deletion 21999 LOC_Os11g27520 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr11 15818001 15840000 0 0 Deletion 21999 LOC_Os11g27530 FHA domain containing protein, putative, expressed FN2157-S Chr11 18836550 C-T 0 0 Single Base Substitution 0 Homo FN2157-S Chr11 20386667 C-A 0 0 Single Base Substitution 0 Homo FN2157-S Chr11 20548021 20548362 0 0 Inversion 0 FN2157-S Chr11 26412323 26412646 0 0 Inversion 0 FN2157-S Chr11 28240714 G-A 0 0 Single Base Substitution 0 Homo FN2157-S Chr11 28429707 Chr3 16633154 0 Translocation 0 FN2157-S Chr11 28467263 Chr8 23697565 0 Translocation 0 LOC_Os11g47320 protein transporter, putative, expressed FN2157-S Chr11 7181664 7181665 0 0 Insertion 1 HET FN2157-S Chr12 12068187 G-A 0 0 Single Base Substitution 0 HET FN2157-S Chr12 13509001 13528000 0 0 Deletion 18999 LOC_Os12g23780 expressed protein FN2157-S Chr12 13509001 13528000 0 0 Deletion 18999 LOC_Os12g23790 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr12 13509001 13528000 0 0 Deletion 18999 LOC_Os12g23800 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr12 15239088 15239089 0 0 Deletion 1 HET FN2157-S Chr12 19421957 C-T 0 0 Single Base Substitution 0 Homo FN2157-S Chr12 1965598 A-G 0 0 Single Base Substitution 0 HET FN2157-S Chr12 23741001 23765000 0 0 Deletion 23999 LOC_Os12g38660 expressed protein FN2157-S Chr12 23741001 23765000 0 0 Deletion 23999 LOC_Os12g38670 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr12 23741001 23765000 0 0 Deletion 23999 LOC_Os12g38680 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr12 23741001 23765000 0 0 Deletion 23999 LOC_Os12g38690 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr12 2466352 Chr6 30778799 0 Translocation 0 FN2157-S Chr12 2466352 Chr6 30778799 0 Translocation 0 LOC_Os06g50880 WD domain, G-beta repeat domain containing protein, expressed FN2157-S Chr12 2466359 Chr6 30778800 0 Translocation 0 FN2157-S Chr12 2466359 Chr6 30778800 0 Translocation 0 LOC_Os06g50880 WD domain, G-beta repeat domain containing protein, expressed FN2157-S Chr12 8680183 Chr11 27722254 0 Translocation 0 FN2157-S Chr12 9166738 9167218 0 0 Inversion 0 FN2157-S Chr12 9278001 9292000 0 0 Deletion 13999 LOC_Os12g16220 nmrA-like family domain containing protein, expressed FN2157-S Chr12 9278001 9292000 0 0 Deletion 13999 LOC_Os12g16230 exostosin, putative, expressed FN2157-S Chr12 9278001 9292000 0 0 Deletion 13999 LOC_Os12g16240 nmrA-like family domain containing protein, expressed FN2157-S Chr12 9278001 9292000 0 0 Deletion 13999 LOC_Os12g16250 nmrA-like family domain containing protein, expressed FN2157-S Chr12 9716659 T-A 0 0 Single Base Substitution 0 HET FN2157-S Chr2 11578163 11578539 0 0 Inversion 0 FN2157-S Chr2 11578163 11578539 0 0 Inversion 0 LOC_Os02g19804 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed FN2157-S Chr2 19171304 A-G 0 0 Single Base Substitution 0 HET FN2157-S Chr2 27058309 27058706 0 0 Inversion 0 LOC_Os02g44642 STE_MEKK_ste11_MAP3K.10 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed FN2157-S Chr2 3161019 3161381 0 0 Inversion 0 FN2157-S Chr2 32622731 G-A 0 0 Single Base Substitution 0 HET FN2157-S Chr2 6668299 6668652 0 0 Inversion 0 FN2157-S Chr3 13646418 Chr1 33549357 0 Translocation 0 FN2157-S Chr3 18687312 18687711 0 0 Inversion 0 LOC_Os03g32630 ABC transporter, ATP-binding protein, putative, expressed FN2157-S Chr3 20216759 20216920 0 0 Inversion 0 LOC_Os03g36500 expressed protein FN2157-S Chr3 27608362 27608549 0 0 Inversion 0 FN2157-S Chr3 31298039 31298574 0 0 Inversion 0 FN2157-S Chr3 6314468 C-T 0 0 Single Base Substitution 0 HET FN2157-S Chr3 6355800 G-A 0 0 Single Base Substitution 0 HET FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23470 transposon protein, putative, unclassified, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23480 retrotransposon protein, putative, unclassified FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23500 hypothetical protein FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23510 retrotransposon, putative, centromere-specific, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23520 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23530 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23550 basic helix-loop-helix family protein, putative, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23580 xylosyltransferase, putative, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23590 hypothetical protein FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23600 D-mannose binding lectin family protein, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23610 expressed protein FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23620 D-mannose binding lectin family protein, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23630 expressed protein FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23650 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23660 ligA, putative, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23670 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23680 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23689 expressed protein FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23700 lectin protein kinase family protein, putative, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23710 transposon protein, putative, CACTA, En/Spm sub-class FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23720 lectin protein kinase family protein, putative, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23739 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23760 lectin protein kinase family protein, putative, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23780 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23799 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23820 methionyl-tRNA synthetase, putative, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23830 exonuclease, putative, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23849 expressed protein FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23870 transposon protein, putative, unclassified, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23880 transposon protein, putative, unclassified, expressed FN2157-S Chr4 13417001 13668000 0 0 Deletion 250999 LOC_Os04g23890 AGC_PVPK_like_kin82y.10 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN2157-S Chr4 18346001 18361000 0 0 Deletion 14999 LOC_Os04g30700 expressed protein FN2157-S Chr4 18346001 18361000 0 0 Deletion 14999 LOC_Os04g30710 expressed protein FN2157-S Chr4 20421661 A-G 0 0 Single Base Substitution 0 Homo FN2157-S Chr4 20652825 20653140 0 0 Inversion 0 FN2157-S Chr4 22348224 22348493 0 0 Inversion 0 LOC_Os04g37550 aspartic proteinase nepenthesin-2 precursor, putative, expressed FN2157-S Chr4 22494396 22494397 0 0 Insertion 1 HET FN2157-S Chr4 23113166 23679155 0 0 Inversion 0 LOC_Os04g38890 expressed protein FN2157-S Chr4 23113166 23679155 0 0 Inversion 0 LOC_Os04g39730 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr4 31586459 31586728 0 0 Inversion 0 FN2157-S Chr4 31586459 31586728 0 0 Inversion 0 LOC_Os04g53040 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr4 34440284 34440514 0 0 Inversion 0 LOC_Os04g57840 transposon protein, putative, unclassified, expressed FN2157-S Chr5 11006968 11007541 0 0 Inversion 0 FN2157-S Chr5 12557001 12580000 0 0 Deletion 22999 LOC_Os05g21230 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr5 12557001 12580000 0 0 Deletion 22999 LOC_Os05g21240 expressed protein FN2157-S Chr5 14904708 14904709 0 0 Deletion 1 HET FN2157-S Chr5 17360964 17361343 0 0 Inversion 0 FN2157-S Chr5 184081 G-A 0 0 Single Base Substitution 0 Homo FN2157-S Chr5 2105001 2124000 0 0 Deletion 18999 LOC_Os05g04540 expressed protein FN2157-S Chr5 2105001 2124000 0 0 Deletion 18999 LOC_Os05g04550 CAMK_KIN1/SNF1/Nim1_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN2157-S Chr5 22949094 A-T 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os05g39130 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr5 2623353 2623488 0 0 Inversion 0 LOC_Os05g05320 PPR repeat domain containing protein, putative, expressed FN2157-S Chr5 455392 455740 0 0 Inversion 0 LOC_Os05g01760 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed FN2157-S Chr6 12259604 C-G 0 0 Single Base Substitution 0 HET FN2157-S Chr6 12259608 C-T 0 0 Single Base Substitution 0 HET FN2157-S Chr6 24689001 24717000 0 0 Deletion 27999 LOC_Os06g41250 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr6 24689001 24717000 0 0 Deletion 27999 LOC_Os06g41260 hypothetical protein FN2157-S Chr6 24689001 24717000 0 0 Deletion 27999 LOC_Os06g41270 expressed protein FN2157-S Chr6 24689001 24717000 0 0 Deletion 27999 LOC_Os06g41280 hypothetical protein FN2157-S Chr6 24689001 24717000 0 0 Deletion 27999 LOC_Os06g41290 expressed protein FN2157-S Chr6 24689001 24717000 0 0 Deletion 27999 LOC_Os06g41300 expressed protein FN2157-S Chr6 24689001 24717000 0 0 Deletion 27999 LOC_Os06g41310 hypothetical protein FN2157-S Chr6 27100001 27116000 0 0 Deletion 15999 LOC_Os06g44860 OsSPL10 - SBP-box gene family member, expressed FN2157-S Chr6 6650207 6650217 0 0 Deletion 10 HET FN2157-S Chr6 6851803 C-G 0 0 Single Base Substitution 0 HET FN2157-S Chr6 8170442 8170448 0 0 Insertion 6 HET FN2157-S Chr7 13491146 13491384 0 0 Inversion 0 LOC_Os07g23880 glycosyl hydrolase, family 31, putative, expressed FN2157-S Chr7 13522317 T-A 0 0 Single Base Substitution 0 HET FN2157-S Chr7 18670041 18692960 0 0 Inversion 0 FN2157-S Chr7 18674261 18692961 0 0 Inversion 0 FN2157-S Chr7 22885158 T-G 0 0 Single Base Substitution 0 HET FN2157-S Chr7 2615001 2628000 0 0 Deletion 12999 LOC_Os07g05580 ribosomal protein L7Ae, putative, expressed FN2157-S Chr7 2615001 2628000 0 0 Deletion 12999 LOC_Os07g05590 expressed protein FN2157-S Chr7 27021735 A-G 0 0 Single Base Substitution 0 HET FN2157-S Chr7 27549416 27549600 0 0 Inversion 0 LOC_Os07g46160 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN2157-S Chr7 2825001 2882000 0 0 Deletion 56999 LOC_Os07g05880 OsFBK18 - F-box domain and kelch repeat containing protein, expressed FN2157-S Chr7 2825001 2882000 0 0 Deletion 56999 LOC_Os07g05890 expressed protein FN2157-S Chr7 2825001 2882000 0 0 Deletion 56999 LOC_Os07g05900 ZOS7-02 - C2H2 zinc finger protein, expressed FN2157-S Chr7 2825001 2882000 0 0 Deletion 56999 LOC_Os07g05910 expressed protein FN2157-S Chr7 2825001 2882000 0 0 Deletion 56999 LOC_Os07g05920 retrotransposon protein, putative, unclassified FN2157-S Chr7 2825001 2882000 0 0 Deletion 56999 LOC_Os07g05930 expressed protein FN2157-S Chr7 2825001 2882000 0 0 Deletion 56999 LOC_Os07g05940 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed FN2157-S Chr7 4450793 Chr6 30983134 0 Translocation 0 FN2157-S Chr7 5983001 5996000 0 0 Deletion 12999 LOC_Os07g10930 hypothetical protein FN2157-S Chr7 5983001 5996000 0 0 Deletion 12999 LOC_Os07g10940 exo70 exocyst complex subunit family protein, expressed FN2157-S Chr8 10882041 T-C 0 0 Single Base Substitution 0 HET FN2157-S Chr8 11166774 11166775 0 0 Deletion 1 frameshift_variant HET LOC_Os08g18220 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr8 11708086 11708374 0 0 Inversion 0 LOC_Os08g19590 Homeobox domain containing protein, expressed FN2157-S Chr8 16890726 T-A 0 0 Single Base Substitution 0 HET FN2157-S Chr8 20158543 20158819 0 0 Inversion 0 LOC_Os08g32540 cyclin, putative, expressed FN2157-S Chr8 23697578 24109768 0 0 Inversion 0 FN2157-S Chr8 23697578 24109768 0 0 Inversion 0 LOC_Os08g38050 transposon protein, putative, unclassified, expressed FN2157-S Chr8 24615413 G-T 0 0 Single Base Substitution 0 HET FN2157-S Chr8 24615414 A-T 0 0 Single Base Substitution 0 HET FN2157-S Chr8 26854997 26855000 0 0 Deletion 3 HET FN2157-S Chr8 5795001 5808000 0 0 Deletion 12999 LOC_Os08g10020 photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed FN2157-S Chr8 5819444 A-T 0 0 Single Base Substitution 0 HET FN2157-S Chr8 5910928 5910938 0 0 Deletion 10 frameshift_variant HET LOC_Os08g10190 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr9 12018937 12019167 0 0 Inversion 0 FN2157-S Chr9 12526326 Chr2 35903250 0 Translocation 0 FN2157-S Chr9 12526326 Chr2 35903250 0 Translocation 0 LOC_Os02g58770 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr9 12531575 Chr2 35903231 0 Translocation 0 FN2157-S Chr9 12531575 Chr2 35903231 0 Translocation 0 LOC_Os02g58770 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr9 15172001 15201000 0 0 Deletion 28999 LOC_Os09g25340 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr9 15172001 15201000 0 0 Deletion 28999 LOC_Os09g25350 transposon protein, putative, CACTA, En/Spm sub-class FN2157-S Chr9 15172001 15201000 0 0 Deletion 28999 LOC_Os09g25360 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr9 17708001 17732000 0 0 Deletion 23999 LOC_Os09g29150 expressed protein FN2157-S Chr9 17708001 17732000 0 0 Deletion 23999 LOC_Os09g29160 expressed protein FN2157-S Chr9 20134001 20146000 0 0 Deletion 11999 LOC_Os09g34110 expressed protein FN2157-S Chr9 20134001 20146000 0 0 Deletion 11999 LOC_Os09g34120 expressed protein FN2157-S Chr9 20822657 C-T 0 0 Single Base Substitution 0 HET FN2157-S Chr9 22466001 22499000 0 0 Deletion 32999 LOC_Os09g39140 vignain precursor, putative, expressed FN2157-S Chr9 22466001 22499000 0 0 Deletion 32999 LOC_Os09g39150 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2157-S Chr9 22466001 22499000 0 0 Deletion 32999 LOC_Os09g39160 thiol protease SEN102 precursor, putative, expressed FN2157-S Chr9 22466001 22499000 0 0 Deletion 32999 LOC_Os09g39170 cysteine proteinase COT44 precursor, putative, expressed FN2157-S Chr9 22823001 22852000 0 0 Deletion 28999 LOC_Os09g39820 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr9 22823001 22852000 0 0 Deletion 28999 LOC_Os09g39830 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr9 22823001 22852000 0 0 Deletion 28999 LOC_Os09g39840 retrotransposon protein, putative, unclassified, expressed FN2157-S Chr9 22823001 22852000 0 0 Deletion 28999 LOC_Os09g39850 AP2 domain containing protein, expressed FN2157-S Chr9 8038696 8038822 0 0 Inversion 0 FN2157-S Chr9 8516720 8516723 0 0 Deletion 3 Homo