FN2158-S Chr1 1095001 1126000 0 0 Deletion 30999 LOC_Os01g02950 expressed protein FN2158-S Chr1 1095001 1126000 0 0 Deletion 30999 LOC_Os01g02960 expressed protein FN2158-S Chr1 1095001 1126000 0 0 Deletion 30999 LOC_Os01g02970 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr1 1095001 1126000 0 0 Deletion 30999 LOC_Os01g02980 expressed protein FN2158-S Chr1 34101664 G-A 0 0 Single Base Substitution 0 HET FN2158-S Chr1 35406600 C-T 0 0 Single Base Substitution 0 HET FN2158-S Chr10 2389924 G-A 0 0 Single Base Substitution 0 HET FN2158-S Chr10 255364 A-G 0 0 Single Base Substitution 0 HET FN2158-S Chr10 8660447 Chr3 24075323 0 Translocation 0 FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22580 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22590 retrotransposon protein, putative, Ty1-copia subclass FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22600 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22610 retrotransposon, putative, centromere-specific, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22620 retrotransposon protein, putative, LINE subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22630 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22640 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22650 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22660 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22670 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22690 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22700 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22710 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22720 retrotransposon protein, putative, Ty3-gypsy subclass FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22730 retrotransposon protein, putative, unclassified FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22740 retrotransposon protein, putative, Ty3-gypsy subclass FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22750 retrotransposon protein, putative, Ty3-gypsy subclass FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22760 hypothetical protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22770 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22780 retrotransposon, putative, centromere-specific, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22800 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22820 retrotransposon protein, putative, unclassified FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22860 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22880 retrotransposon, putative, centromere-specific FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22890 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22920 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22950 retrotransposon, putative, centromere-specific, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22960 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22970 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g22980 transposon protein, putative, CACTA, En/Spm sub-class FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23000 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23020 transposon protein, putative, CACTA, En/Spm sub-class FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23030 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23040 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23050 expressed protein FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23060 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23070 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23080 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23090 retrotransposon protein, putative, unclassified, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 12993001 13307000 0 0 Deletion 313999 LOC_Os11g23110 retrotransposon, putative, centromere-specific, expressed FN2158-S Chr11 17208615 G-A 0 0 Single Base Substitution 0 Homo FN2158-S Chr11 20852786 20852787 0 0 Deletion 1 frameshift_variant Homo LOC_Os11g35560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2158-S Chr11 22767910 22767911 0 0 Insertion 1 HET FN2158-S Chr11 2501828 Chr3 13989883 0 Translocation 0 LOC_Os03g24540 expressed protein FN2158-S Chr11 2501828 Chr3 13989883 0 Translocation 0 LOC_Os11g05540 rhoGAP domain containing protein, expressed FN2158-S Chr11 6054772 C-T 0 0 Single Base Substitution 0 HET FN2158-S Chr12 19893493 19893499 0 0 Deletion 6 HET FN2158-S Chr12 22488069 Chr4 33646660 0 Translocation 0 LOC_Os04g56440 ENT domain containing protein, expressed FN2158-S Chr12 22488069 Chr4 33646660 0 Translocation 0 LOC_Os12g36720 RGH1A, putative, expressed FN2158-S Chr2 11970751 T-A 0 0 Single Base Substitution 0 HET FN2158-S Chr2 12274884 12274886 0 0 Deletion 2 Homo FN2158-S Chr2 15733944 15733945 0 0 Deletion 1 Homo FN2158-S Chr2 17259792 C-A 0 0 Single Base Substitution 0 Homo FN2158-S Chr2 17572601 17572603 0 0 Deletion 2 HET FN2158-S Chr2 31095157 T-A 0 0 Single Base Substitution 0 Homo FN2158-S Chr2 4322408 4322410 0 0 Deletion 2 HET FN2158-S Chr2 4958981 4958984 0 0 Insertion 3 disruptive_inframe_insertion HET LOC_Os02g09650 AP2 domain containing protein, expressed FN2158-S Chr3 16476688 C-G 0 0 Single Base Substitution 0 HET FN2158-S Chr3 19869828 G-C 0 0 Single Base Substitution 0 Homo FN2158-S Chr3 20488788 20488889 0 0 Inversion 0 LOC_Os03g36920 disease resistance protein, putative, expressed FN2158-S Chr3 20511139 20511141 0 0 Deletion 2 Homo FN2158-S Chr3 21466625 C-T 0 0 Single Base Substitution 0 Homo FN2158-S Chr3 27536834 27537291 0 0 Inversion 0 LOC_Os03g48370 disease resistance RPP13-like protein 1, putative, expressed FN2158-S Chr3 5426803 5426807 0 0 Deletion 4 Homo FN2158-S Chr4 12751281 G-A 0 0 Single Base Substitution 0 HET FN2158-S Chr4 14779186 G-A 0 0 Single Base Substitution 0 Homo FN2158-S Chr4 18282774 C-A 0 0 Single Base Substitution 0 Homo FN2158-S Chr4 22612673 A-C 0 0 Single Base Substitution 0 HET FN2158-S Chr4 29937 29939 0 0 Insertion 2 HET FN2158-S Chr4 30554941 A-G 0 0 Single Base Substitution 0 HET FN2158-S Chr4 4381715 T-C 0 0 Single Base Substitution 0 HET FN2158-S Chr5 21233365 Chr2 25806919 0 Translocation 0 FN2158-S Chr5 21233365 Chr2 25806919 0 Translocation 0 LOC_Os02g42910 expressed protein FN2158-S Chr5 21233761 Chr2 25806925 0 Translocation 0 FN2158-S Chr5 21233761 Chr2 25806925 0 Translocation 0 LOC_Os02g42910 expressed protein FN2158-S Chr6 13733513 C-T 0 0 Single Base Substitution 0 HET FN2158-S Chr6 2564679 A-G 0 0 Single Base Substitution 0 Homo FN2158-S Chr6 3725495 3725507 0 0 Deletion 12 Homo FN2158-S Chr6 7075397 7075416 0 0 Deletion 19 HET FN2158-S Chr6 7365604 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g13370 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2158-S Chr7 156665 156668 0 0 Deletion 3 HET FN2158-S Chr7 26806106 A-T 0 0 Single Base Substitution 0 Homo FN2158-S Chr7 5591083 T-C 0 0 Single Base Substitution 0 HET FN2158-S Chr8 13109532 C-G 0 0 Single Base Substitution 0 HET FN2158-S Chr8 17910649 17910655 0 0 Insertion 6 HET FN2158-S Chr8 6014317 6014319 0 0 Insertion 2 HET FN2158-S Chr9 11212401 G-A 0 0 Single Base Substitution 0 HET FN2158-S Chr9 15250432 G-A 0 0 Single Base Substitution 0 HET FN2158-S Chr9 20219800 20219805 0 0 Deletion 5 HET FN2158-S Chr9 547849 Chr4 33645890 0 Translocation 0 FN2158-S Chr9 547849 Chr4 33645890 0 Translocation 0 LOC_Os04g56440 ENT domain containing protein, expressed