FN2179-S Chr1 16883267 16883268 0 0 Insertion 1 HET FN2179-S Chr1 21676902 21676907 0 0 Deletion 5 Homo FN2179-S Chr1 31900123 31900125 0 0 Deletion 2 HET FN2179-S Chr10 11743659 C-A 0 0 Single Base Substitution 0 HET FN2179-S Chr10 13345323 Chr2 16714300 0 Translocation 0 FN2179-S Chr10 1349663 T-G 0 0 Single Base Substitution 0 Homo FN2179-S Chr11 13172846 C-T 0 0 Single Base Substitution 0 HET FN2179-S Chr11 15059709 C-T 0 0 Single Base Substitution 0 HET FN2179-S Chr11 18363707 18463502 0 0 Inversion 0 LOC_Os11g31430 expressed protein FN2179-S Chr11 19843682 Chr1 1322432 0 Translocation 0 LOC_Os11g33938 conserved hypothetical protein FN2179-S Chr11 22995419 Chr7 21960411 0 Translocation 0 FN2179-S Chr11 2304130 Chr3 18691207 0 Translocation 0 LOC_Os03g32636 hypothetical protein FN2179-S Chr11 2304130 Chr3 18691207 0 Translocation 0 LOC_Os11g05210 retrotransposon protein, putative, unclassified, expressed FN2179-S Chr11 25301712 Chr1 2386677 0 Translocation 0 FN2179-S Chr11 25301712 Chr1 2386677 0 Translocation 0 LOC_Os01g05090 expressed protein FN2179-S Chr11 27382709 C-T 0 0 Single Base Substitution 0 HET FN2179-S Chr11 7920239 7920241 0 0 Insertion 2 HET FN2179-S Chr12 12005807 12005808 0 0 Deletion 1 HET FN2179-S Chr12 15367884 C-G 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR HET LOC_Os12g26320 retrotransposon, putative, centromere-specific, expressed FN2179-S Chr12 25735822 25735823 0 0 Deletion 1 HET FN2179-S Chr12 3453481 3453484 0 0 Deletion 3 Homo FN2179-S Chr12 4457146 4457147 0 0 Deletion 1 HET FN2179-S Chr12 6099714 Chr1 19169878 0 Translocation 0 FN2179-S Chr12 6099714 Chr1 19169878 0 Translocation 0 LOC_Os01g34760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2179-S Chr12 839836 G-A 0 0 Single Base Substitution 0 HET FN2179-S Chr12 8412571 T-A 0 0 Single Base Substitution 0 HET FN2179-S Chr2 13710263 13710266 0 0 Insertion 3 disruptive_inframe_insertion HET LOC_Os02g23820 retrotransposon protein, putative, unclassified, expressed FN2179-S Chr2 16871128 C-T 0 0 Single Base Substitution 0 HET FN2179-S Chr2 17430126 G-A 0 0 Single Base Substitution 0 HET FN2179-S Chr2 18372605 18372978 0 0 Inversion 0 LOC_Os02g30810 OsSAUR10 - Auxin-responsive SAUR gene family member, expressed FN2179-S Chr2 18483058 18483059 0 0 Deletion 1 HET FN2179-S Chr2 4831052 T-A 0 0 Single Base Substitution 0 Homo FN2179-S Chr2 8363255 9158257 0 0 Inversion 0 FN2179-S Chr2 8363255 9158257 0 0 Inversion 0 LOC_Os02g16090 retrotransposon protein, putative, LINE subclass, expressed FN2179-S Chr3 11315495 11315496 0 0 Insertion 1 frameshift_variant HET LOC_Os03g20080 retrotransposon protein, putative, unclassified, expressed FN2179-S Chr3 14230666 C-T 0 0 Single Base Substitution 0 HET FN2179-S Chr3 15637380 15931345 0 0 Inversion 0 FN2179-S Chr4 10292766 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g18610 retrotransposon protein, putative, Ty3-gypsy subclass FN2179-S Chr4 13951889 A-G 0 0 Single Base Substitution 0 HET FN2179-S Chr4 15147612 G-T 0 0 Single Base Substitution 0 HET FN2179-S Chr4 21154433 G-A 0 0 Single Base Substitution 0 HET FN2179-S Chr4 26444890 T-A 0 0 Single Base Substitution 0 HET FN2179-S Chr4 4057488 4089228 0 0 Inversion 0 LOC_Os04g07630 hypothetical protein FN2179-S Chr4 4057488 4089228 0 0 Inversion 0 LOC_Os04g07680 retrotransposon protein, putative, unclassified, expressed FN2179-S Chr4 963985 Chr3 31563999 0 Translocation 0 FN2179-S Chr5 16247991 Chr1 3244571 0 Translocation 0 FN2179-S Chr5 20998166 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g35360 beta-galactosidase 7 precursor, putative, expressed FN2179-S Chr5 21200847 21391871 0 0 Inversion 0 FN2179-S Chr5 21200847 21391871 0 0 Inversion 0 LOC_Os05g36090 zinc finger DHHC domain-containing protein, putative, expressed FN2179-S Chr5 21350780 21712397 0 0 Inversion 0 FN2179-S Chr5 21350780 21712397 0 0 Inversion 0 LOC_Os05g37160 tubulin/FtsZ domain containing protein, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36090 zinc finger DHHC domain-containing protein, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36100 AP2 domain containing protein, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36110 protein of unknown function DUF502 domain containing protein, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36120 polypyrimidine tract-binding protein, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36130 transposon protein, putative, unclassified FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36140 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36150 Yip1 domain containing protein, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36160 G-box-binding factor 4, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36170 retrotransposon protein, putative, unclassified, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36180 retrotransposon protein, putative, unclassified, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36184 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36186 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36190 OsFBT7 - F-box and tubby domain containing protein, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36200 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36210 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36220 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36230 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36240 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36250 hypothetical protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36260 soluble inorganic pyrophosphatase, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36270 fructose-1,6-bisphosphatase, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36280 histone H3, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36290 actin, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36300 hypothetical protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36310 zinc finger, C3HC4 type domain containing protein, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36320 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36330 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36340 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36350 pentatricopeptide, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36360 U-box domain containing protein, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36370 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36380 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36900 dof zinc finger domain containing protein, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36910 NC domain-containing protein, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36920 histone deacetylase, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36930 histone deacetylase, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36940 retrotransposon protein, putative, unclassified, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36950 hypothetical protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36960 protein kinase, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36970 DUF623 domain containing protein, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36980 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36990 ATOFP18/OFP18, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g36994 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g37000 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g37010 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g37020 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g37030 expressed protein FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g37040 MYB family transcription factor, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g37050 MYB family transcription factor, putative, expressed FN2179-S Chr5 21391001 21658000 0 0 Deletion 266999 LOC_Os05g37060 MYB family transcription factor, putative, expressed FN2179-S Chr5 21998763 21998764 0 0 Insertion 1 HET FN2179-S Chr5 26505316 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g45760 EMB1796, putative, expressed FN2179-S Chr6 14495684 Chr3 15931353 0 Translocation 0 LOC_Os06g24690 hypothetical protein FN2179-S Chr6 14496670 Chr3 15637389 0 Translocation 0 LOC_Os06g24690 hypothetical protein FN2179-S Chr6 14497248 Chr1 3978695 0 Translocation 0 LOC_Os01g08190 transcriptional corepressor LEUNIG, putative, expressed FN2179-S Chr6 14497248 Chr1 3978695 0 Translocation 0 LOC_Os06g24690 hypothetical protein FN2179-S Chr6 15986283 Chr4 29378165 0 Translocation 0 FN2179-S Chr6 16429187 T-C 0 0 Single Base Substitution 0 HET FN2179-S Chr6 25585976 Chr5 666474 0 Translocation 0 FN2179-S Chr6 4117942 G-T 0 0 Single Base Substitution 0 Homo FN2179-S Chr7 1481231 Chr1 3304663 0 Translocation 0 FN2179-S Chr7 18733081 18901035 0 0 Inversion 0 LOC_Os07g31550 powdery mildew resistant protein 5, putative, expressed FN2179-S Chr7 18733081 18901035 0 0 Inversion 0 LOC_Os07g31800 NB-ARC domain containing protein, expressed FN2179-S Chr7 18733089 18901038 0 0 Inversion 0 LOC_Os07g31550 powdery mildew resistant protein 5, putative, expressed FN2179-S Chr7 18733089 18901038 0 0 Inversion 0 LOC_Os07g31800 NB-ARC domain containing protein, expressed FN2179-S Chr7 23049310 23049720 0 0 Inversion 0 FN2179-S Chr7 23049310 23049720 0 0 Inversion 0 LOC_Os07g38360 expressed protein FN2179-S Chr7 2407609 Chr1 30657813 0 Translocation 0 FN2179-S Chr7 2407609 Chr1 30657813 0 Translocation 0 LOC_Os01g53360 expressed protein FN2179-S Chr7 28706966 T-A 0 0 Single Base Substitution 0 Homo FN2179-S Chr7 7286190 G-A 0 0 Single Base Substitution 0 HET FN2179-S Chr7 8716231 A-G 0 0 Single Base Substitution 0 Homo FN2179-S Chr8 1076922 C-T 0 0 Single Base Substitution 0 Homo FN2179-S Chr8 10856226 C-A 0 0 Single Base Substitution 0 HET FN2179-S Chr8 11742064 11742065 0 0 Deletion 1 HET FN2179-S Chr8 8051990 Chr1 23474030 0 Translocation 0 LOC_Os01g41460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2179-S Chr8 8051990 Chr1 23474030 0 Translocation 0 LOC_Os08g13540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2179-S Chr8 922232 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g02350 expressed protein FN2179-S Chr9 17016293 A-G 0 0 Single Base Substitution 0 Homo FN2179-S Chr9 19636479 G-A 0 0 Single Base Substitution 0 Homo FN2179-S Chr9 21343803 21343807 0 0 Deletion 4 Homo FN2179-S Chr9 2823796 2823797 0 0 Insertion 1 HET FN2179-S Chr9 4753131 4753204 0 0 Deletion 73 HET FN2179-S Chr9 7499428 Chr6 18640340 0 Translocation 0