FN2217-S Chr1 17081728 C-A 0 0 Single Base Substitution 0 HET FN2217-S Chr1 40902005 T-A 0 0 Single Base Substitution 0 Homo FN2217-S Chr10 12286357 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g23950 hypothetical protein FN2217-S Chr10 16049805 Chr9 376717 0 Translocation 0 FN2217-S Chr10 18529944 G-A 0 0 Single Base Substitution 0 HET FN2217-S Chr10 21726403 A-G 0 0 Single Base Substitution 0 Homo FN2217-S Chr10 7910050 G-A 0 0 Single Base Substitution 0 HET FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g21960 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g21970 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g21980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g21990 expressed protein FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22020 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22030 retrotransposon protein, putative, unclassified FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22040 expressed protein FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22050 expressed protein FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22060 retrotransposon protein, putative, unclassified FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22070 retrotransposon protein, putative, Ty3-gypsy subclass FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22080 retrotransposon protein, putative, Ty3-gypsy subclass FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22090 expressed protein FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22110 retrotransposon, putative, centromere-specific, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22120 hypothetical protein FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22130 retrotransposon, putative, centromere-specific, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22140 retrotransposon, putative, centromere-specific FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22150 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22154 retrotransposon, putative, centromere-specific, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22160 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22170 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22180 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22190 transposon protein, putative, unclassified FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22210 retrotransposon protein, putative, unclassified FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22230 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22240 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22250 expressed protein FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22260 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22270 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22280 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22290 retrotransposon protein, putative, unclassified FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22310 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22320 retrotransposon, putative, centromere-specific FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22336 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22342 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr11 12604001 12814000 0 0 Deletion 209999 LOC_Os11g22350 white-brown complex homolog protein, putative, expressed FN2217-S Chr11 12810887 Chr5 8349182 0 Translocation 0 FN2217-S Chr11 13434998 Chr2 8032395 0 Translocation 0 FN2217-S Chr11 13603700 C-A 0 0 Single Base Substitution 0 HET FN2217-S Chr11 13603701 G-A 0 0 Single Base Substitution 0 HET FN2217-S Chr11 16463578 C-T 0 0 Single Base Substitution 0 Homo FN2217-S Chr11 22392417 22392418 0 0 Deletion 1 HET FN2217-S Chr11 26027001 26065000 0 0 Deletion 37999 LOC_Os11g43140 expressed protein FN2217-S Chr11 26027001 26065000 0 0 Deletion 37999 LOC_Os11g43150 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2217-S Chr11 26027001 26065000 0 0 Deletion 37999 LOC_Os11g43160 transposon protein, putative, CACTA, En/Spm sub-class FN2217-S Chr11 26027001 26065000 0 0 Deletion 37999 LOC_Os11g43170 hypothetical protein FN2217-S Chr11 26027001 26065000 0 0 Deletion 37999 LOC_Os11g43180 expressed protein FN2217-S Chr11 26027001 26065000 0 0 Deletion 37999 LOC_Os11g43200 tropinone reductase 2, putative, expressed FN2217-S Chr11 26027001 26065000 0 0 Deletion 37999 LOC_Os11g43210 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2217-S Chr11 268355 G-T 0 0 Single Base Substitution 0 Homo FN2217-S Chr11 358812 G-A 0 0 Single Base Substitution 0 HET FN2217-S Chr11 4272426 C-T 0 0 Single Base Substitution 0 Homo FN2217-S Chr11 5743805 Chr5 14533917 0 Translocation 0 FN2217-S Chr11 899375 A-G 0 0 Single Base Substitution 0 HET FN2217-S Chr11 9541141 A-T 0 0 Single Base Substitution 0 HET FN2217-S Chr12 12029895 12029896 0 0 Deletion 1 HET FN2217-S Chr12 19324311 T-A 0 0 Single Base Substitution 0 HET FN2217-S Chr12 21031526 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g34650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr12 26393472 26393473 0 0 Deletion 1 HET FN2217-S Chr12 9106956 9106958 0 0 Deletion 2 HET FN2217-S Chr2 23199752 G-A 0 0 Single Base Substitution 0 HET FN2217-S Chr2 25918777 25918778 0 0 Insertion 1 HET FN2217-S Chr2 30515285 A-G 0 0 Single Base Substitution 0 HET FN2217-S Chr2 8962441 A-T 0 0 Single Base Substitution 0 HET FN2217-S Chr2 8962450 T-A 0 0 Single Base Substitution 0 HET FN2217-S Chr3 13362876 13362877 0 0 Deletion 1 frameshift_variant HET LOC_Os03g23110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr3 17342795 C-T 0 0 Single Base Substitution 0 Homo FN2217-S Chr3 31044365 A-G 0 0 Single Base Substitution 0 HET FN2217-S Chr4 1953728 1953729 0 0 Deletion 1 HET FN2217-S Chr4 25942517 C-T 0 0 Single Base Substitution 0 HET FN2217-S Chr4 3883421 3883427 0 0 Deletion 6 Homo FN2217-S Chr4 3892636 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g07320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr4 8103097 G-A 0 0 Single Base Substitution 0 HET FN2217-S Chr5 10379813 C-A 0 0 Single Base Substitution 0 HET FN2217-S Chr5 12286966 Chr3 35560973 0 Translocation 0 FN2217-S Chr5 12286966 Chr3 35560973 0 Translocation 0 LOC_Os03g62860 glucan endo-1,3-beta-glucosidase precursor, putative, expressed FN2217-S Chr5 12287260 Chr3 35560978 0 Translocation 0 FN2217-S Chr5 12287260 Chr3 35560978 0 Translocation 0 LOC_Os03g62860 glucan endo-1,3-beta-glucosidase precursor, putative, expressed FN2217-S Chr5 18486147 C-T 0 0 Single Base Substitution 0 HET FN2217-S Chr5 22556297 A-G 0 0 Single Base Substitution 0 HET FN2217-S Chr5 5653149 G-A 0 0 Single Base Substitution 0 HET FN2217-S Chr5 7264824 7264844 0 0 Deletion 20 HET FN2217-S Chr6 12151612 12151613 0 0 Deletion 1 frameshift_variant HET LOC_Os06g21030 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2217-S Chr6 12545870 12545871 0 0 Deletion 1 frameshift_variant HET LOC_Os06g21700 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr6 17364138 G-A 0 0 Single Base Substitution 0 HET FN2217-S Chr6 23608201 Chr2 20852142 0 Translocation 0 FN2217-S Chr6 2701239 T-A 0 0 Single Base Substitution 0 Homo FN2217-S Chr7 12938685 12938687 0 0 Deletion 2 frameshift_variant HET LOC_Os07g22960 retrotransposon protein, putative, unclassified, expressed FN2217-S Chr7 22995699 G-T 0 0 Single Base Substitution 0 HET FN2217-S Chr7 27613461 27613463 0 0 Insertion 2 HET FN2217-S Chr7 5557176 T-C 0 0 Single Base Substitution 0 HET FN2217-S Chr8 17088052 17088058 0 0 Deletion 6 Homo FN2217-S Chr8 24637966 T-G 0 0 Single Base Substitution 0 HET FN2217-S Chr8 25557963 A-T 0 0 Single Base Substitution 0 HET FN2217-S Chr8 2861746 2861770 0 0 Deletion 24 inframe_deletion HET LOC_Os08g05420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2217-S Chr8 463774 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os08g01770 adenylate kinase, putative, expressed FN2217-S Chr9 12795658 C-A 0 0 Single Base Substitution 0 HET FN2217-S Chr9 14858192 14858197 0 0 Deletion 5 HET FN2217-S Chr9 15865712 G-T 0 0 Single Base Substitution 0 Homo FN2217-S Chr9 15983387 15983392 0 0 Deletion 5 Homo FN2217-S Chr9 16812922 16812926 0 0 Deletion 4 Homo FN2217-S Chr9 18370188 Chr8 2960408 0 Translocation 0 FN2217-S Chr9 223262 223263 0 0 Insertion 1 frameshift_variant HET LOC_Os09g01260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2217-S Chr9 22367107 22367109 0 0 Deletion 2 Homo FN2217-S Chr9 232593 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g01270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed