FN2218-S Chr1 15313985 C-A 0 0 Single Base Substitution 0 HET FN2218-S Chr1 16637544 16637545 0 0 Deletion 1 HET FN2218-S Chr1 19804448 G-A 0 0 Single Base Substitution 0 HET FN2218-S Chr1 21032026 T-C 0 0 Single Base Substitution 0 HET FN2218-S Chr1 28587182 T-C 0 0 Single Base Substitution 0 HET FN2218-S Chr1 4705422 T-C 0 0 Single Base Substitution 0 HET FN2218-S Chr10 10420633 G-A 0 0 Single Base Substitution 0 HET FN2218-S Chr10 15235739 15235743 0 0 Deletion 4 HET FN2218-S Chr10 4005287 4005289 0 0 Deletion 2 HET FN2218-S Chr10 8736002 G-C 0 0 Single Base Substitution 0 HET FN2218-S Chr11 16615087 A-G 0 0 Single Base Substitution 0 Homo FN2218-S Chr11 17542950 C-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os11g30170 transposon protein, putative, unclassified, expressed FN2218-S Chr11 2378625 2378626 0 0 Deletion 1 Homo FN2218-S Chr11 5658136 5658141 0 0 Deletion 5 Homo FN2218-S Chr11 8606648 G-A 0 0 Single Base Substitution 0 HET FN2218-S Chr12 15102254 C-T 0 0 Single Base Substitution 0 HET FN2218-S Chr12 16489282 16489283 0 0 Deletion 1 HET FN2218-S Chr12 2085048 G-T 0 0 Single Base Substitution 0 HET FN2218-S Chr12 24275651 24275653 0 0 Insertion 2 HET FN2218-S Chr2 10295661 C-A 0 0 Single Base Substitution 0 HET FN2218-S Chr2 10757896 C-T 0 0 Single Base Substitution 0 HET FN2218-S Chr2 17498659 T-A 0 0 Single Base Substitution 0 HET FN2218-S Chr2 20024278 G-A 0 0 Single Base Substitution 0 HET FN2218-S Chr2 21888499 G-A 0 0 Single Base Substitution 0 HET FN2218-S Chr2 26053156 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g43250 receptor-like protein kinase precursor, putative, expressed FN2218-S Chr2 28603349 C-T 0 0 Single Base Substitution 0 HET FN2218-S Chr2 30414705 30414706 0 0 Deletion 1 HET FN2218-S Chr2 8395115 8395121 0 0 Deletion 6 disruptive_inframe_deletion Homo LOC_Os02g15050 expressed protein FN2218-S Chr3 10224923 10224925 0 0 Insertion 2 frameshift_variant HET LOC_Os03g18230 expressed protein FN2218-S Chr3 11249344 11249355 0 0 Deletion 11 HET FN2218-S Chr3 15543432 C-A 0 0 Single Base Substitution 0 HET FN2218-S Chr3 16566912 16566913 0 0 Deletion 1 Homo FN2218-S Chr3 2139620 A-G 0 0 Single Base Substitution 0 Homo FN2218-S Chr3 22093628 G-C 0 0 Single Base Substitution 0 Homo FN2218-S Chr3 22093632 A-T 0 0 Single Base Substitution 0 Homo FN2218-S Chr3 31597914 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g55530 HLS, putative, expressed FN2218-S Chr3 35777781 A-T 0 0 Single Base Substitution 0 HET FN2218-S Chr3 412942 A-T 0 0 Single Base Substitution 0 Homo FN2218-S Chr3 5355301 G-A 0 0 Single Base Substitution 0 HET FN2218-S Chr4 16909327 G-T 0 0 Single Base Substitution 0 HET FN2218-S Chr4 16914119 G-T 0 0 Single Base Substitution 0 HET FN2218-S Chr4 18764248 C-T 0 0 Single Base Substitution 0 HET FN2218-S Chr4 19848142 C-G 0 0 Single Base Substitution 0 HET FN2218-S Chr4 20830707 T-C 0 0 Single Base Substitution 0 HET FN2218-S Chr4 21532558 21532560 0 0 Deletion 2 Homo FN2218-S Chr4 25441191 C-T 0 0 Single Base Substitution 0 HET FN2218-S Chr4 27356244 T-A 0 0 Single Base Substitution 0 HET FN2218-S Chr4 28445423 T-C 0 0 Single Base Substitution 0 HET FN2218-S Chr4 29763956 C-A 0 0 Single Base Substitution 0 HET FN2218-S Chr4 31962421 31962422 0 0 Deletion 1 HET FN2218-S Chr4 4268572 4268573 0 0 Insertion 1 HET FN2218-S Chr5 12102798 12102799 0 0 Deletion 1 HET FN2218-S Chr5 14050171 A-G 0 0 Single Base Substitution 0 Homo FN2218-S Chr5 14971763 14971766 0 0 Deletion 3 HET FN2218-S Chr5 1761646 C-T 0 0 Single Base Substitution 0 HET FN2218-S Chr5 24342370 24342372 0 0 Deletion 2 HET FN2218-S Chr5 4286656 G-T 0 0 Single Base Substitution 0 HET FN2218-S Chr5 9354726 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g16480 retrotransposon protein, putative, unclassified, expressed FN2218-S Chr6 1177122 G-A 0 0 Single Base Substitution 0 HET FN2218-S Chr6 1177129 G-A 0 0 Single Base Substitution 0 HET FN2218-S Chr6 13886017 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g23770 expressed protein FN2218-S Chr6 15912545 C-T 0 0 Single Base Substitution 0 Homo FN2218-S Chr6 21171252 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g36170 initiator tRNA phosphoribosyl transferase family protein, putative, expressed FN2218-S Chr6 23251200 Chr3 13645054 0 Translocation 0 LOC_Os06g39160 retrotransposon protein, putative, unclassified, expressed FN2218-S Chr6 23307621 G-T 0 0 Single Base Substitution 0 HET FN2218-S Chr6 23834322 C-A 0 0 Single Base Substitution 0 HET FN2218-S Chr6 25220246 T-C 0 0 Single Base Substitution 0 HET FN2218-S Chr6 29683841 G-T 0 0 Single Base Substitution 0 HET FN2218-S Chr6 702389 G-T 0 0 Single Base Substitution 0 HET FN2218-S Chr6 7292234 Chr2 18076972 0 Translocation 0 FN2218-S Chr6 7292234 Chr2 18076972 0 Translocation 0 LOC_Os02g30350 retrotransposon protein, putative, unclassified, expressed FN2218-S Chr7 14573845 A-G 0 0 Single Base Substitution 0 HET FN2218-S Chr7 14615977 A-C 0 0 Single Base Substitution 0 HET FN2218-S Chr7 2002556 2002577 0 0 Deletion 21 disruptive_inframe_deletion Homo LOC_Os07g04530 GYF domain containing protein, putative, expressed FN2218-S Chr7 20453759 A-T 0 0 Single Base Substitution 0 Homo FN2218-S Chr7 22897469 Chr3 11855839 0 Translocation 0 FN2218-S Chr7 23583901 Chr1 25038571 0 Translocation 0 LOC_Os01g43690 expressed protein FN2218-S Chr7 23583901 Chr1 25038571 0 Translocation 0 LOC_Os07g39350 transporter family protein, putative, expressed FN2218-S Chr7 23585458 Chr1 25038602 0 Translocation 0 LOC_Os01g43690 expressed protein FN2218-S Chr7 23585458 Chr1 25038602 0 Translocation 0 LOC_Os07g39360 transporter family protein, putative, expressed FN2218-S Chr7 2377677 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g05270 expressed protein FN2218-S Chr7 25740548 25845783 0 0 Inversion 0 FN2218-S Chr7 25753275 25983225 0 0 Inversion 0 FN2218-S Chr7 25753275 25983225 0 0 Inversion 0 LOC_Os07g43390 4-alpha-glucanotransferase, chloroplast precursor, putative, expressed FN2218-S Chr7 25844572 A-T 0 0 Single Base Substitution 0 HET FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43730 transcription elongation factor 1, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43740 zinc finger, C3HC4 type domain containing protein, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43750 retrotransposon protein, putative, unclassified, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43760 retrotransposon protein, putative, unclassified FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43770 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43780 retrotransposon protein, putative, Ty3-gypsy subclass FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43790 retrotransposon protein, putative, unclassified, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43800 EF hand family protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43810 RNA recognition motif containing protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43820 glycosyl hydrolase, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43830 nucleic acid binding protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43840 nucleic acid binding protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43850 nucleic acid binding protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43860 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43870 heat shock protein DnaJ, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43890 emp24/gp25L/p24 family protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43900 protein kinase domain containing protein, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43910 hypothetical protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43925 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43940 X8 domain containing protein, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43950 RNA recognition motif containing protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43960 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43970 calmodulin-binding protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43980 DEAD-box ATP-dependent RNA helicase, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g43990 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44000 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44004 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44010 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44020 SNARE associated Golgi protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44030 myb/SANT domain protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44040 ras-related protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44050 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44060 haloacid dehalogenase-like hydrolase family protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44070 pectinacetylesterase domain containing protein, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44080 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44090 myb-related protein Hv33, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44100 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44110 cytochrome P450 72A1, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44120 hypothetical protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44130 cytochrome P450 72A1, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44140 cytochrome P450 72A1, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44160 retrotransposon protein, putative, unclassified, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44170 pentatricopeptide repeat domain containing protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44180 OsRCI2-10 - Hydrophobic protein LTI6A, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44190 h/ACA ribonucleoprotein complex subunit 4, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44200 transcription regulator, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44210 SNF2 family N-terminal domain containing protein, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44220 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44230 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44240 transposon protein, putative, unclassified, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44250 dirigent, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44260 dirigent, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44280 dirigent, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44290 CAMK_KIN1/SNF1/Nim1_like.29 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44299 pentatricopeptide, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44310 heat shock protein DnaJ, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44320 expressed protein FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44330 kinase, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44350 sec20 domain containing protein, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44360 serine/threonine-protein kinase Haspin, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44370 dirigent, putative, expressed FN2218-S Chr7 26171001 26521000 0 0 Deletion 349999 LOC_Os07g44380 dirigent, putative, expressed FN2218-S Chr7 26197324 C-T 0 0 Single Base Substitution 0 Homo FN2218-S Chr7 26790483 C-T 0 0 Single Base Substitution 0 HET FN2218-S Chr7 27576931 A-T 0 0 Single Base Substitution 0 HET FN2218-S Chr7 28697034 A-G 0 0 Single Base Substitution 0 HET FN2218-S Chr7 28805464 G-A 0 0 Single Base Substitution 0 HET FN2218-S Chr7 28956813 C-T 0 0 Single Base Substitution 0 HET FN2218-S Chr7 29495158 C-T 0 0 Single Base Substitution 0 HET FN2218-S Chr7 6407089 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g11610 transposon protein, putative, unclassified, expressed FN2218-S Chr7 6564155 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g11860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2218-S Chr7 7075868 T-A 0 0 Single Base Substitution 0 HET FN2218-S Chr7 7075881 T-A 0 0 Single Base Substitution 0 HET FN2218-S Chr7 8653587 C-G 0 0 Single Base Substitution 0 HET FN2218-S Chr7 9481352 G-T 0 0 Single Base Substitution 0 HET FN2218-S Chr7 9944147 G-A 0 0 Single Base Substitution 0 HET FN2218-S Chr7 9944834 G-T 0 0 Single Base Substitution 0 HET FN2218-S Chr8 10084903 C-A 0 0 Single Base Substitution 0 Homo FN2218-S Chr8 16143536 T-A 0 0 Single Base Substitution 0 Homo FN2218-S Chr8 19239322 C-A 0 0 Single Base Substitution 0 HET FN2218-S Chr8 19624639 C-T 0 0 Single Base Substitution 0 Homo FN2218-S Chr8 22554866 22554868 0 0 Insertion 2 HET FN2218-S Chr8 2861073 Chr1 17634409 0 Translocation 0 LOC_Os01g32210 retrotransposon protein, putative, unclassified FN2218-S Chr8 2861073 Chr1 17634409 0 Translocation 0 LOC_Os08g05420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2218-S Chr8 3763188 C-A 0 0 Single Base Substitution 0 HET FN2218-S Chr8 7182772 C-A 0 0 Single Base Substitution 0 HET FN2218-S Chr8 8144557 G-A 0 0 Single Base Substitution 0 HET FN2218-S Chr9 11219819 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g18280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2218-S Chr9 202840 Chr6 14437353 0 Translocation 0 LOC_Os09g01240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2218-S Chr9 202853 Chr6 14437164 0 Translocation 0 LOC_Os09g01240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2218-S Chr9 3843609 3843612 0 0 Insertion 3 HET FN2218-S Chr9 4770574 A-G 0 0 Single Base Substitution 0 Homo FN2218-S Chr9 5670778 G-A 0 0 Single Base Substitution 0 Homo