FN2224-S Chr1 10472001 10495000 0 0 Deletion 22999 LOC_Os01g18584 WRKY9, expressed FN2224-S Chr1 10472001 10495000 0 0 Deletion 22999 LOC_Os01g18610 retrotransposon protein, putative, LINE subclass, expressed FN2224-S Chr1 10472001 10495000 0 0 Deletion 22999 LOC_Os01g18620 transferase family protein, putative, expressed FN2224-S Chr1 10472001 10495000 0 0 Deletion 22999 LOC_Os01g18630 aspartic proteinase oryzasin-1 precursor, putative, expressed FN2224-S Chr1 14237519 C-T 0 0 Single Base Substitution 0 HET FN2224-S Chr1 14347778 14347783 0 0 Insertion 5 HET FN2224-S Chr1 15434127 G-C 0 0 Single Base Substitution 0 HET FN2224-S Chr1 20556707 C-T 0 0 Single Base Substitution 0 Homo FN2224-S Chr1 31771212 31771215 0 0 Deletion 3 HET FN2224-S Chr1 42287068 G-T 0 0 Single Base Substitution 0 HET FN2224-S Chr1 43015895 T-C 0 0 Single Base Substitution 0 Homo FN2224-S Chr1 5265450 G-C 0 0 Single Base Substitution 0 Homo FN2224-S Chr10 11736928 11736934 0 0 Deletion 6 Homo FN2224-S Chr10 16394933 Chr4 27332032 0 Translocation 0 FN2224-S Chr11 15458560 T-C 0 0 Single Base Substitution 0 HET FN2224-S Chr11 18924012 19106887 0 0 Inversion 0 LOC_Os11g32100 inducer of CBF expression 1, putative, expressed FN2224-S Chr11 20376966 A-T 0 0 Single Base Substitution 0 HET FN2224-S Chr11 23683209 23836567 0 0 Inversion 0 FN2224-S Chr11 23836572 23844256 0 0 Inversion 0 FN2224-S Chr11 25754419 25754424 0 0 Deletion 5 HET FN2224-S Chr12 17088487 A-G 0 0 Single Base Substitution 0 HET FN2224-S Chr12 17947633 C-T 0 0 Single Base Substitution 0 Homo FN2224-S Chr12 18263751 18263753 0 0 Deletion 2 Homo FN2224-S Chr12 22319313 C-T 0 0 Single Base Substitution 0 Homo FN2224-S Chr12 22567715 Chr9 13370471 0 Translocation 0 FN2224-S Chr12 22567791 Chr9 13369565 0 Translocation 0 FN2224-S Chr12 23863256 23863258 0 0 Deletion 2 HET FN2224-S Chr12 26062782 G-A 0 0 Single Base Substitution 0 HET FN2224-S Chr12 4333211 T-G 0 0 Single Base Substitution 0 HET FN2224-S Chr2 13366986 G-A 0 0 Single Base Substitution 0 Homo FN2224-S Chr2 22667220 22667230 0 0 Deletion 10 frameshift_variant HET LOC_Os02g37580 fimbrin-like protein 2, putative, expressed FN2224-S Chr2 23119809 G-A 0 0 Single Base Substitution 0 Homo FN2224-S Chr2 23611696 23611709 0 0 Deletion 13 Homo FN2224-S Chr2 25457551 C-G 0 0 Single Base Substitution 0 Homo FN2224-S Chr2 2835605 2835607 0 0 Deletion 2 Homo FN2224-S Chr2 28634162 28634166 0 0 Insertion 4 HET FN2224-S Chr2 29734565 T-C 0 0 Single Base Substitution 0 HET FN2224-S Chr2 6351177 A-T 0 0 Single Base Substitution 0 Homo FN2224-S Chr3 1223063 1223064 0 0 Deletion 1 HET FN2224-S Chr3 34390786 34390787 0 0 Deletion 1 Homo FN2224-S Chr3 36145260 36145261 0 0 Deletion 1 Homo FN2224-S Chr4 22282695 T-C 0 0 Single Base Substitution 0 HET FN2224-S Chr4 22514001 22567000 0 0 Deletion 52999 LOC_Os04g37850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2224-S Chr4 22514001 22567000 0 0 Deletion 52999 LOC_Os04g37860 variant latency associated nuclear antigen, putative, expressed FN2224-S Chr4 22514001 22567000 0 0 Deletion 52999 LOC_Os04g37870 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2224-S Chr4 22514001 22567000 0 0 Deletion 52999 LOC_Os04g37880 expressed protein FN2224-S Chr4 22514001 22567000 0 0 Deletion 52999 LOC_Os04g37890 expressed protein FN2224-S Chr4 22514001 22567000 0 0 Deletion 52999 LOC_Os04g37904 protein phosphatase 2C, putative, expressed FN2224-S Chr4 22514001 22567000 0 0 Deletion 52999 LOC_Os04g37920 FAD binding domain of DNA photolyase domain containing protein, expressed FN2224-S Chr4 22514001 22567000 0 0 Deletion 52999 LOC_Os04g37930 expressed protein FN2224-S Chr4 22514001 22567000 0 0 Deletion 52999 LOC_Os04g37940 expressed protein FN2224-S Chr4 23556253 23556258 0 0 Deletion 5 frameshift_variant Homo LOC_Os04g39560 expressed protein FN2224-S Chr4 34218823 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g57520 UBX domain-containing protein, putative, expressed FN2224-S Chr5 2356050 2356057 0 0 Deletion 7 Homo FN2224-S Chr5 4648494 C-G 0 0 Single Base Substitution 0 HET FN2224-S Chr6 11046324 C-T 0 0 Single Base Substitution 0 Homo FN2224-S Chr6 15503733 T-C 0 0 Single Base Substitution 0 HET FN2224-S Chr6 22263641 22263651 0 0 Deletion 10 HET FN2224-S Chr6 30093543 G-C 0 0 Single Base Substitution 0 HET FN2224-S Chr7 10040650 C-T 0 0 Single Base Substitution 0 Homo FN2224-S Chr7 10040675 G-C 0 0 Single Base Substitution 0 HET FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17720 retrotransposon protein, putative, Ty3-gypsy subclass FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17730 retrotransposon protein, putative, unclassified FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17740 expressed protein FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17750 retrotransposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17760 expressed protein FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17770 tryptophanyl-tRNA synthetase, cytoplasmic, putative, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17780 transposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17790 retrotransposon protein, putative, Ty3-gypsy subclass FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17820 transposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17830 retrotransposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17840 transposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17850 transposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17860 retrotransposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17870 retrotransposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17880 retrotransposon protein, putative, unclassified FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17890 retrotransposon protein, putative, unclassified FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17900 hypothetical protein FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17910 retrotransposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17920 retrotransposon protein, putative, unclassified FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17930 retrotransposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17940 retrotransposon protein, putative, unclassified FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17950 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17960 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17970 AMP-binding domain containing protein, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17980 retrotransposon, putative, centromere-specific, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g17990 retrotransposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g18000 retrotransposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g18010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g18020 retrotransposon protein, putative, Ty3-gypsy subclass FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g18030 retrotransposon protein, putative, unclassified, expressed FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g18040 expressed protein FN2224-S Chr7 10466001 10683000 0 0 Deletion 216999 LOC_Os07g18050 RNA-binding motif protein, putative, expressed FN2224-S Chr7 10511348 Chr6 11334670 0 Translocation 0 FN2224-S Chr7 10512022 10512214 0 0 Inversion 0 FN2224-S Chr7 11399654 11399830 0 0 Deletion 176 frameshift_variant HET LOC_Os07g19250 transposon protein, putative, unclassified FN2224-S Chr7 18898205 18898208 0 0 Deletion 3 disruptive_inframe_deletion Homo LOC_Os07g31800 NB-ARC domain containing protein, expressed FN2224-S Chr7 24930686 24930687 0 0 Deletion 1 HET FN2224-S Chr7 28457001 28472000 0 0 Deletion 14999 LOC_Os07g47610 transposon protein, putative, Ac/Ds sub-class, expressed FN2224-S Chr7 28457001 28472000 0 0 Deletion 14999 LOC_Os07g47620 universal stress protein domain containing protein, putative, expressed FN2224-S Chr7 28457001 28472000 0 0 Deletion 14999 LOC_Os07g47630 RNA recognition motif containing protein, expressed FN2224-S Chr7 4226565 4226568 0 0 Deletion 3 HET FN2224-S Chr7 4446007 G-A 0 0 Single Base Substitution 0 HET FN2224-S Chr7 8477292 8477293 0 0 Deletion 1 HET FN2224-S Chr7 8598078 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g14990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2224-S Chr8 1176555 G-A 0 0 Single Base Substitution 0 HET FN2224-S Chr8 27378749 Chr2 14991322 0 Translocation 0 LOC_Os08g43320 OsRhmbd14 - Putative Rhomboid homologue, expressed FN2224-S Chr8 27756349 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g44070 expressed protein FN2224-S Chr8 6280808 G-C 0 0 Single Base Substitution 0 HET