FN2254-S Chr1 10261626 10261637 0 0 Deletion 11 Homo FN2254-S Chr1 16798379 C-T 0 0 Single Base Substitution 0 HET FN2254-S Chr1 17281031 T-A 0 0 Single Base Substitution 0 HET FN2254-S Chr1 26582459 26582461 0 0 Insertion 2 HET FN2254-S Chr1 29637203 C-T 0 0 Single Base Substitution 0 HET FN2254-S Chr1 30900113 T-C 0 0 Single Base Substitution 0 HET FN2254-S Chr1 3358918 3510062 0 0 Inversion 0 LOC_Os01g07120 AP2 domain containing protein, expressed FN2254-S Chr1 3358918 3510062 0 0 Inversion 0 LOC_Os01g07400 WD40-like domain containing protein, putative, expressed FN2254-S Chr1 3358930 3825235 0 0 Inversion 0 LOC_Os01g07120 AP2 domain containing protein, expressed FN2254-S Chr1 33777610 A-T 0 0 Single Base Substitution 0 HET FN2254-S Chr1 3759001 3825000 0 0 Deletion 65999 LOC_Os01g07840 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2254-S Chr1 3759001 3825000 0 0 Deletion 65999 LOC_Os01g07850 glyoxalase family protein, putative, expressed FN2254-S Chr1 3759001 3825000 0 0 Deletion 65999 LOC_Os01g07860 retrotransposon protein, putative, unclassified, expressed FN2254-S Chr1 3759001 3825000 0 0 Deletion 65999 LOC_Os01g07870 ABC transporter family protein, putative, expressed FN2254-S Chr1 3759001 3825000 0 0 Deletion 65999 LOC_Os01g07880 transcription factor HY5, putative, expressed FN2254-S Chr1 3759001 3825000 0 0 Deletion 65999 LOC_Os01g07890 expressed protein FN2254-S Chr1 3759001 3825000 0 0 Deletion 65999 LOC_Os01g07900 expressed protein FN2254-S Chr1 3759001 3825000 0 0 Deletion 65999 LOC_Os01g07910 NADH-cytochrome b5 reductase, putative, expressed FN2254-S Chr10 142861 G-A 0 0 Single Base Substitution 0 HET FN2254-S Chr10 14833031 T-C 0 0 Single Base Substitution 0 Homo FN2254-S Chr10 18070175 G-A 0 0 Single Base Substitution 0 HET FN2254-S Chr10 18114554 T-G 0 0 Single Base Substitution 0 HET FN2254-S Chr10 22640 C-A 0 0 Single Base Substitution 0 HET FN2254-S Chr11 11508165 Chr8 19974189 0 Translocation 0 LOC_Os08g32220 retrotransposon protein, putative, Ty3-gypsy subclass FN2254-S Chr11 11508165 Chr8 19974189 0 Translocation 0 LOC_Os11g20000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2254-S Chr11 959677 963747 0 0 Inversion 0 FN2254-S Chr12 15481492 Chr8 5914743 0 Translocation 0 FN2254-S Chr12 16182369 Chr4 32905476 0 Translocation 0 LOC_Os04g55320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2254-S Chr12 16182369 Chr4 32905476 0 Translocation 0 LOC_Os12g27490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2254-S Chr12 25493322 25493324 0 0 Insertion 2 HET FN2254-S Chr12 6225181 Chr1 9028874 0 Translocation 0 LOC_Os01g16040 mitochondrial carrier protein, putative, expressed FN2254-S Chr12 6225181 Chr1 9028874 0 Translocation 0 LOC_Os12g11500 resistance protein SlVe1 precursor, putative, expressed FN2254-S Chr12 8421537 C-T 0 0 Single Base Substitution 0 Homo FN2254-S Chr2 24757305 T-G 0 0 Single Base Substitution 0 HET FN2254-S Chr2 26002795 26002801 0 0 Insertion 6 HET FN2254-S Chr2 6171212 C-T 0 0 Single Base Substitution 0 Homo FN2254-S Chr3 11018106 G-A 0 0 Single Base Substitution 0 HET FN2254-S Chr3 14684400 C-A 0 0 Single Base Substitution 0 Homo FN2254-S Chr3 19349752 19349753 0 0 Deletion 1 frameshift_variant Homo LOC_Os03g33870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2254-S Chr3 20113392 T-C 0 0 Single Base Substitution 0 Homo FN2254-S Chr3 20113393 C-A 0 0 Single Base Substitution 0 Homo FN2254-S Chr3 26761919 26761981 0 0 Insertion 62 HET FN2254-S Chr3 34894370 C-T 0 0 Single Base Substitution 0 Homo FN2254-S Chr3 439268 G-T 0 0 Single Base Substitution 0 HET FN2254-S Chr4 13220369 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g23220 expressed protein FN2254-S Chr4 13756517 T-C 0 0 Single Base Substitution 0 HET FN2254-S Chr4 1442209 1442211 0 0 Insertion 2 HET FN2254-S Chr4 23624265 G-T 0 0 Single Base Substitution 0 HET FN2254-S Chr4 32065675 Chr3 35082623 0 Translocation 0 LOC_Os04g53810 leucoanthocyanidin reductase, putative, expressed FN2254-S Chr4 32230947 32230951 0 0 Deletion 4 splice_acceptor_variant&splice_region_variant&intron_variant Homo LOC_Os04g54080 serine/threonine-protein kinase receptor precursor, putative, expressed FN2254-S Chr5 13034788 A-T 0 0 Single Base Substitution 0 Homo FN2254-S Chr5 17534054 17534055 0 0 Deletion 1 frameshift_variant Homo LOC_Os05g30250 Os5bglu19 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed FN2254-S Chr5 21868667 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g37380 retrotransposon protein, putative, unclassified, expressed FN2254-S Chr5 27016928 G-T 0 0 Single Base Substitution 0 HET FN2254-S Chr5 29852789 29852790 0 0 Insertion 1 HET FN2254-S Chr5 7263194 7263195 0 0 Deletion 1 HET FN2254-S Chr6 15284637 15284638 0 0 Deletion 1 HET FN2254-S Chr6 17022414 Chr2 8917832 0 Translocation 0 FN2254-S Chr6 17245861 T-G 0 0 Single Base Substitution 0 HET FN2254-S Chr6 29169784 A-G 0 0 Single Base Substitution 0 HET FN2254-S Chr7 12534275 Chr6 18214712 0 Translocation 0 FN2254-S Chr7 18779157 G-A 0 0 Single Base Substitution 0 HET FN2254-S Chr7 25461510 G-A 0 0 Single Base Substitution 0 HET FN2254-S Chr7 28487349 Chr2 32873287 0 Translocation 0 FN2254-S Chr7 9804610 C-T 0 0 Single Base Substitution 0 HET FN2254-S Chr8 28366463 28366464 0 0 Insertion 1 HET FN2254-S Chr8 4629631 A-G 0 0 Single Base Substitution 0 HET FN2254-S Chr8 6761552 Chr4 3220843 0 Translocation 0 FN2254-S Chr8 8807498 C-T 0 0 Single Base Substitution 0 Homo FN2254-S Chr8 9335286 Chr2 19023541 0 Translocation 0 FN2254-S Chr8 9335286 Chr2 19023541 0 Translocation 0 LOC_Os02g32200 thioesterase family protein, putative, expressed FN2254-S Chr9 7499428 Chr6 18640340 0 Translocation 0 FN2254-S Chr9 840483 T-A 0 0 Single Base Substitution 0 HET