FN2261-S Chr1 12270135 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os01g21870 expressed protein FN2261-S Chr1 18496044 18496046 0 0 Deletion 2 HET FN2261-S Chr1 20492104 20492105 0 0 Deletion 1 Homo FN2261-S Chr1 3190274 3190280 0 0 Deletion 6 Homo FN2261-S Chr1 37613657 G-T 0 0 Single Base Substitution 0 HET FN2261-S Chr1 40906064 A-G 0 0 Single Base Substitution 0 HET FN2261-S Chr10 12594051 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g24540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2261-S Chr10 16057586 T-C 0 0 Single Base Substitution 0 HET FN2261-S Chr10 6927113 6927202 0 0 Deletion 89 splice_acceptor_variant&splice_donor_variant&disruptive_inframe_deletion&splice_region_variant&intro HET LOC_Os10g12450 expressed protein FN2261-S Chr11 1829593 G-A 0 0 Single Base Substitution 0 HET FN2261-S Chr11 4794341 4794343 0 0 Deletion 2 HET FN2261-S Chr12 10398967 A-G 0 0 Single Base Substitution 0 Homo FN2261-S Chr12 13226471 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g23374 retrotransposon protein, putative, unclassified FN2261-S Chr12 15364715 15364716 0 0 Insertion 1 frameshift_variant HET LOC_Os12g26320 retrotransposon, putative, centromere-specific, expressed FN2261-S Chr12 17942171 A-G 0 0 Single Base Substitution 0 Homo FN2261-S Chr12 20335437 T-A 0 0 Single Base Substitution 0 HET FN2261-S Chr12 20923807 20923808 0 0 Deletion 1 HET FN2261-S Chr12 26251806 A-G 0 0 Single Base Substitution 0 HET FN2261-S Chr12 2884418 2884419 0 0 Deletion 1 Homo FN2261-S Chr12 7776666 C-T 0 0 Single Base Substitution 0 HET FN2261-S Chr2 22000307 T-C 0 0 Single Base Substitution 0 HET FN2261-S Chr2 26109426 C-T 0 0 Single Base Substitution 0 Homo FN2261-S Chr2 6943497 T-C 0 0 Single Base Substitution 0 HET FN2261-S Chr3 11592898 A-C 0 0 Single Base Substitution 0 Homo FN2261-S Chr3 13604221 13604223 0 0 Insertion 2 HET FN2261-S Chr3 15775735 G-T 0 0 Single Base Substitution 0 HET FN2261-S Chr3 22893988 22893989 0 0 Deletion 1 frameshift_variant HET LOC_Os03g41170 expressed protein FN2261-S Chr3 29562610 29562621 0 0 Deletion 11 Homo FN2261-S Chr3 35788386 G-A 0 0 Single Base Substitution 0 HET FN2261-S Chr3 5455879 G-T 0 0 Single Base Substitution 0 HET FN2261-S Chr3 6163756 6163776 0 0 Deletion 20 Homo FN2261-S Chr4 13888214 G-A 0 0 Single Base Substitution 0 Homo FN2261-S Chr4 19315220 19315230 0 0 Deletion 10 frameshift_variant Homo LOC_Os04g32220 expressed protein FN2261-S Chr4 27441010 G-T 0 0 Single Base Substitution 0 HET FN2261-S Chr4 30059354 30059372 0 0 Deletion 18 inframe_deletion HET LOC_Os04g50810 expressed protein FN2261-S Chr4 30520708 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g51520 glycosyl hydrolases family 16, putative, expressed FN2261-S Chr4 31558428 Chr3 34149121 0 Translocation 0 FN2261-S Chr4 31887631 31887632 0 0 Insertion 1 HET FN2261-S Chr5 16733296 16733304 0 0 Deletion 8 HET FN2261-S Chr5 18746217 G-A 0 0 Single Base Substitution 0 HET FN2261-S Chr5 22674086 22674105 0 0 Deletion 19 Homo FN2261-S Chr5 24802386 G-A 0 0 Single Base Substitution 0 HET FN2261-S Chr5 28162447 T-A 0 0 Single Base Substitution 0 Homo FN2261-S Chr5 28219216 C-T 0 0 Single Base Substitution 0 HET FN2261-S Chr5 29753370 29753378 0 0 Deletion 8 Homo FN2261-S Chr5 5608378 5608386 0 0 Deletion 8 Homo FN2261-S Chr6 21903887 C-A 0 0 Single Base Substitution 0 Homo FN2261-S Chr7 16427001 16449000 0 0 Deletion 21999 LOC_Os07g28140 cytochrome P450, putative, expressed FN2261-S Chr7 16427001 16449000 0 0 Deletion 21999 LOC_Os07g28150 hAT dimerisation domain containing protein, putative, expressed FN2261-S Chr7 16427001 16449000 0 0 Deletion 21999 LOC_Os07g28160 cytochrome P450 51, putative, expressed FN2261-S Chr7 16427001 16449000 0 0 Deletion 21999 LOC_Os07g28170 expressed protein FN2261-S Chr7 16450001 16484000 0 0 Deletion 33999 LOC_Os07g28170 expressed protein FN2261-S Chr7 16450001 16484000 0 0 Deletion 33999 LOC_Os07g28180 expressed protein FN2261-S Chr7 16450001 16484000 0 0 Deletion 33999 LOC_Os07g28190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2261-S Chr7 16450001 16484000 0 0 Deletion 33999 LOC_Os07g28200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2261-S Chr7 16450001 16484000 0 0 Deletion 33999 LOC_Os07g28210 retrotransposon protein, putative, unclassified, expressed FN2261-S Chr7 16450001 16484000 0 0 Deletion 33999 LOC_Os07g28220 transposon protein, putative, CACTA, En/Spm sub-class FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28480 glutathione S-transferase, putative, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28490 retrotransposon protein, putative, unclassified, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28500 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28530 retrotransposon protein, putative, unclassified, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28540 retrotransposon protein, putative, unclassified, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28550 hypothetical protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28570 leucine rich repeat protein, putative, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28580 hypothetical protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28590 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28600 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28610 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28614 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28620 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28630 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28640 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28644 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28650 transposon protein, putative, unclassified, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28660 ice-structuring glycoprotein precursor, putative, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28670 retrotransposon protein, putative, unclassified, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28680 retrotransposon, putative, centromere-specific FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28690 hypothetical protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28700 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28710 60S acidic ribosomal protein, putative, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28720 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28730 retrotransposon protein, putative, unclassified FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28760 transposon protein, putative, unclassified, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28770 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28780 transposon protein, putative, CACTA, En/Spm sub-class FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28790 PAP fibrillin family domain containing protein, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28800 heat shock protein DnaJ, putative, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28810 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28820 ribonuclease 2-5A family protein, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28830 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28840 SET domain containing protein, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28850 retrotransposon protein, putative, unclassified, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28860 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28870 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28880 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28890 ethylene-responsive protein related, putative, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28900 PPR repeat domain containing protein, putative, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28910 LSD1 zinc finger domain containing protein, expressed FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28920 expressed protein FN2261-S Chr7 16671001 16971000 0 0 Deletion 299999 LOC_Os07g28930 expressed protein FN2261-S Chr7 16928313 Chr4 6466726 0 Translocation 0 FN2261-S Chr7 9896984 G-A 0 0 Single Base Substitution 0 Homo FN2261-S Chr7 9897014 9897017 0 0 Deletion 3 Homo FN2261-S Chr8 104399 104400 0 0 Deletion 1 HET FN2261-S Chr8 12135624 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g20220 retrotransposon protein, putative, unclassified, expressed FN2261-S Chr8 12440875 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g20700 retrotransposon protein, putative, unclassified FN2261-S Chr8 17134730 17134732 0 0 Deletion 2 HET FN2261-S Chr8 17936246 A-T 0 0 Single Base Substitution 0 HET FN2261-S Chr8 19020673 19020677 0 0 Deletion 4 HET FN2261-S Chr8 26965948 G-A 0 0 Single Base Substitution 0 Homo FN2261-S Chr8 8359394 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g13950 transposon protein, putative, CACTA, En/Spm sub-class FN2261-S Chr9 11031372 C-T 0 0 Single Base Substitution 0 HET FN2261-S Chr9 11307386 Chr6 22141205 0 Translocation 0 FN2261-S Chr9 17927308 A-G 0 0 Single Base Substitution 0 HET FN2261-S Chr9 21613564 21613565 0 0 Deletion 1 HET