FN2262-S Chr1 35308496 G-A 0 0 Single Base Substitution 0 Homo FN2262-S Chr1 36315001 36374000 0 0 Deletion 58999 LOC_Os01g62710 transposon protein, putative, unclassified FN2262-S Chr1 36315001 36374000 0 0 Deletion 58999 LOC_Os01g62720 GRF zinc finger family protein FN2262-S Chr1 36315001 36374000 0 0 Deletion 58999 LOC_Os01g62730 expressed protein FN2262-S Chr1 36315001 36374000 0 0 Deletion 58999 LOC_Os01g62740 expressed protein FN2262-S Chr1 36315001 36374000 0 0 Deletion 58999 LOC_Os01g62750 expressed protein FN2262-S Chr1 36315001 36374000 0 0 Deletion 58999 LOC_Os01g62760 protein phosphatase 2C, putative, expressed FN2262-S Chr1 36315001 36374000 0 0 Deletion 58999 LOC_Os01g62770 expressed protein FN2262-S Chr1 36315001 36374000 0 0 Deletion 58999 LOC_Os01g62780 expressed protein FN2262-S Chr1 36315001 36374000 0 0 Deletion 58999 LOC_Os01g62790 expressed protein FN2262-S Chr1 36315001 36374000 0 0 Deletion 58999 LOC_Os01g62800 methyltransferase, putative, expressed FN2262-S Chr1 38688153 39217473 0 0 Inversion 0 FN2262-S Chr1 38688153 39217473 0 0 Inversion 0 LOC_Os01g67490 OTU-like cysteine protease family protein, putative, expressed FN2262-S Chr1 38688168 39217489 0 0 Inversion 0 FN2262-S Chr1 38688168 39217489 0 0 Inversion 0 LOC_Os01g67490 OTU-like cysteine protease family protein, putative, expressed FN2262-S Chr10 13496673 T-C 0 0 Single Base Substitution 0 Homo FN2262-S Chr10 19783025 T-C 0 0 Single Base Substitution 0 HET FN2262-S Chr11 10015545 G-A 0 0 Single Base Substitution 0 HET FN2262-S Chr11 12007097 T-C 0 0 Single Base Substitution 0 HET FN2262-S Chr11 18758358 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g31910 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr11 27393764 27393767 0 0 Deletion 3 HET FN2262-S Chr11 805086 T-A 0 0 Single Base Substitution 0 HET FN2262-S Chr12 10582899 10582915 0 0 Deletion 16 HET FN2262-S Chr12 15460409 A-G 0 0 Single Base Substitution 0 HET FN2262-S Chr12 1839001 1858000 0 0 Deletion 18999 LOC_Os12g04350 sulfotransferase domain containing protein, expressed FN2262-S Chr12 1839001 1858000 0 0 Deletion 18999 LOC_Os12g04360 calmodulin-like protein 1, putative, expressed FN2262-S Chr12 1839001 1858000 0 0 Deletion 18999 LOC_Os12g04370 GRAS family transcription factor containing protein, expressed FN2262-S Chr12 19555602 19555603 0 0 Deletion 1 frameshift_variant HET LOC_Os12g32420 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14030 hypothetical protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14040 retrotransposon protein, putative, Ty3-gypsy subclass FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14059 expressed protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14070 DnaK family protein, putative, expressed FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14080 expressed protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14090 hypothetical protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14100 amino acid transporter, putative, expressed FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14110 expressed protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14120 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14126 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14132 expressed protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14140 expressed protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14150 expressed protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14160 expressed protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14170 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14180 transposon protein, putative, CACTA, En/Spm sub-class FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14200 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14210 expressed protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14220 expressed protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14224 expressed protein FN2262-S Chr12 7964001 8092000 0 0 Deletion 127999 LOC_Os12g14230 expressed protein FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14250 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14270 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14310 expressed protein FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14320 expressed protein FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14330 disease resistance protein RPM1, putative, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14340 hypothetical protein FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14350 transposon protein, putative, CACTA, En/Spm sub-class FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14360 transposon protein, putative, unclassified, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14374 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14420 retrotransposon protein, putative, Ty3-gypsy subclass FN2262-S Chr12 8095001 8234000 0 0 Deletion 138999 LOC_Os12g14430 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr12 8237001 8260000 0 0 Deletion 22999 LOC_Os12g14440 Jacalin-like lectin domain containing protein, putative, expressed FN2262-S Chr12 8237001 8260000 0 0 Deletion 22999 LOC_Os12g14450 expressed protein FN2262-S Chr12 8237001 8260000 0 0 Deletion 22999 LOC_Os12g14460 retrotransposon protein, putative, Ty3-gypsy subclass FN2262-S Chr12 8237001 8260000 0 0 Deletion 22999 LOC_Os12g14470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14480 cysteine-rich receptor-like protein kinase 23 precursor, putative, expressed FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14490 retrotransposon protein, putative, unclassified FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14500 expressed protein FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14510 expressed protein FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14520 expressed protein FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14530 retrotransposon protein, putative, unclassified FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14540 expressed protein FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14550 expressed protein FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14570 hypothetical protein FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14580 tetraspanin family protein, putative, expressed FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14590 retrotransposon protein, putative, unclassified FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14610 cysteine-rich receptor-like protein kinase 32 precursor, putative, expressed FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14630 retrotransposon protein, putative, LINE subclass, expressed FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14640 transposon protein, putative, CACTA, En/Spm sub-class FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14650 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14660 expressed protein FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14670 hypothetical protein FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14680 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14699 protein kinase domain containing protein, expressed FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14720 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14730 hypothetical protein FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14740 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2262-S Chr12 8268001 8441000 0 0 Deletion 172999 LOC_Os12g14750 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2262-S Chr12 9115534 9115536 0 0 Deletion 2 frameshift_variant HET LOC_Os12g16000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2262-S Chr2 18839936 18839945 0 0 Deletion 9 disruptive_inframe_deletion Homo LOC_Os02g31890 ZOS2-08 - C2H2 zinc finger protein, expressed FN2262-S Chr2 21882567 A-T 0 0 Single Base Substitution 0 HET FN2262-S Chr2 22461580 22461585 0 0 Insertion 5 HET FN2262-S Chr2 5300004 5300005 0 0 Deletion 1 HET FN2262-S Chr2 9271024 G-C 0 0 Single Base Substitution 0 HET FN2262-S Chr3 19955001 19970000 0 0 Deletion 14999 LOC_Os03g35970 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr3 19955001 19970000 0 0 Deletion 14999 LOC_Os03g35980 hypothetical protein FN2262-S Chr3 19955001 19970000 0 0 Deletion 14999 LOC_Os03g35990 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr3 19955001 19970000 0 0 Deletion 14999 LOC_Os03g36000 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36020 retrotransposon protein, putative, Ty3-gypsy subclass FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36050 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36060 hypothetical protein FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36070 retrotransposon protein, putative, unclassified FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36080 expressed protein FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36100 retrotransposon protein, putative, Ty3-gypsy subclass FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36110 expressed protein FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36120 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36130 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36140 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr3 19981001 20060000 0 0 Deletion 78999 LOC_Os03g36150 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr3 29440814 29440816 0 0 Insertion 2 HET FN2262-S Chr3 917028 917029 0 0 Deletion 1 HET FN2262-S Chr4 31972778 31972779 0 0 Deletion 1 frameshift_variant HET LOC_Os04g53640 peroxidase precursor, putative, expressed FN2262-S Chr4 3844939 Chr3 13382505 0 Translocation 0 FN2262-S Chr4 4458238 4458245 0 0 Deletion 7 HET FN2262-S Chr5 11050555 G-T 0 0 Single Base Substitution 0 Homo FN2262-S Chr5 13536625 13536630 0 0 Deletion 5 Homo FN2262-S Chr5 15182701 15182712 0 0 Deletion 11 Homo FN2262-S Chr5 27279583 T-G 0 0 Single Base Substitution 0 Homo FN2262-S Chr5 5122040 C-T 0 0 Single Base Substitution 0 HET FN2262-S Chr5 9028919 9028940 0 0 Deletion 21 inframe_deletion HET LOC_Os05g15990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2262-S Chr6 14903696 14903707 0 0 Deletion 11 HET FN2262-S Chr7 13579336 13579337 0 0 Insertion 1 HET FN2262-S Chr7 5627678 C-T 0 0 Single Base Substitution 0 HET FN2262-S Chr7 9825035 9825036 0 0 Deletion 1 splice_acceptor_variant&intron_variant HET LOC_Os07g16750 retrotransposon protein, putative, unclassified, expressed FN2262-S Chr8 11962951 T-C 0 0 Single Base Substitution 0 HET FN2262-S Chr8 17260960 17260962 0 0 Deletion 2 HET FN2262-S Chr8 2120671 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g04320 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2262-S Chr8 24565869 24565870 0 0 Deletion 1 HET FN2262-S Chr8 6782385 G-A 0 0 Single Base Substitution 0 Homo FN2262-S Chr9 1561055 1561056 0 0 Deletion 1 Homo FN2262-S Chr9 19935482 G-A 0 0 Single Base Substitution 0 HET