FN2279-S Chr1 11129884 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os01g19630 expressed protein FN2279-S Chr1 13277001 13283000 0 0 Deletion 5999 LOC_Os01g23610 dihydrolipoyl dehydrogenase, putative, expressed FN2279-S Chr1 20256603 T-C 0 0 Single Base Substitution 0 HET FN2279-S Chr1 22051332 C-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr1 23097603 A-C 0 0 Single Base Substitution 0 Homo FN2279-S Chr1 23097608 C-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr1 24126767 24126769 0 0 Insertion 2 HET FN2279-S Chr1 26749343 C-T 0 0 Single Base Substitution 0 HET FN2279-S Chr1 31854812 31854814 0 0 Deletion 2 HET FN2279-S Chr1 34586345 G-A 0 0 Single Base Substitution 0 HET FN2279-S Chr1 37140758 37140759 0 0 Insertion 1 HET FN2279-S Chr1 6381555 6381566 0 0 Deletion 11 HET FN2279-S Chr10 13860456 A-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr10 13882001 13891000 0 0 Deletion 8999 LOC_Os10g26620 dof zinc finger domain containing protein, putative, expressed FN2279-S Chr10 1395228 A-C 0 0 Single Base Substitution 0 Homo FN2279-S Chr10 15484871 15484873 0 0 Deletion 2 HET FN2279-S Chr10 16833793 A-C 0 0 Single Base Substitution 0 HET FN2279-S Chr10 20329618 T-C 0 0 Single Base Substitution 0 HET FN2279-S Chr10 5175766 C-G 0 0 Single Base Substitution 0 HET FN2279-S Chr11 10912014 Chr8 4491757 0 Translocation 0 LOC_Os08g07950 NB-ARC domain containing protein, expressed FN2279-S Chr11 10912014 Chr8 4491757 0 Translocation 0 LOC_Os11g19130 expressed protein FN2279-S Chr11 10912037 Chr8 4465398 0 Translocation 0 LOC_Os11g19130 expressed protein FN2279-S Chr11 13231450 13231453 0 0 Deletion 3 HET FN2279-S Chr11 17876829 C-T 0 0 Single Base Substitution 0 HET FN2279-S Chr11 18408479 G-A 0 0 Single Base Substitution 0 HET FN2279-S Chr11 18456697 T-G 0 0 Single Base Substitution 0 HET FN2279-S Chr11 217467 T-C 0 0 Single Base Substitution 0 HET FN2279-S Chr11 22342001 22393000 0 0 Deletion 50999 LOC_Os11g37774 stripe rust resistance protein Yr10, putative, expressed FN2279-S Chr11 22342001 22393000 0 0 Deletion 50999 LOC_Os11g37780 stripe rust resistance protein Yr10, putative, expressed FN2279-S Chr11 22342001 22393000 0 0 Deletion 50999 LOC_Os11g37790 mla, putative, expressed FN2279-S Chr11 22342001 22393000 0 0 Deletion 50999 LOC_Os11g37800 mla1, putative, expressed FN2279-S Chr11 25727919 25727922 0 0 Deletion 3 inframe_deletion HET LOC_Os11g42710 retrotransposon protein, putative, unclassified, expressed FN2279-S Chr11 6303871 C-T 0 0 Single Base Substitution 0 HET FN2279-S Chr11 6303872 C-T 0 0 Single Base Substitution 0 HET FN2279-S Chr11 778173 C-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr12 10976062 T-A 0 0 Single Base Substitution 0 HET FN2279-S Chr12 10986986 C-T 0 0 Single Base Substitution 0 HET FN2279-S Chr12 13628389 13628395 0 0 Deletion 6 HET FN2279-S Chr12 147021 C-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr12 16357001 16384000 0 0 Deletion 26999 LOC_Os12g27740 expressed protein FN2279-S Chr12 16357001 16384000 0 0 Deletion 26999 LOC_Os12g27750 OsFBX441 - F-box domain containing protein, expressed FN2279-S Chr12 16357001 16384000 0 0 Deletion 26999 LOC_Os12g27760 OsFBX442 - F-box domain containing protein, expressed FN2279-S Chr12 16357001 16384000 0 0 Deletion 26999 LOC_Os12g27770 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2279-S Chr12 16357001 16384000 0 0 Deletion 26999 LOC_Os12g27780 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2279-S Chr12 16357001 16384000 0 0 Deletion 26999 LOC_Os12g27790 OsFBX443 - F-box domain containing protein, expressed FN2279-S Chr12 4295588 Chr7 7885934 0 Translocation 0 LOC_Os12g08450 retrotransposon protein, putative, unclassified, expressed FN2279-S Chr12 4435112 Chr7 7875864 0 Translocation 0 LOC_Os07g13719 hypothetical protein FN2279-S Chr12 4435112 Chr7 7875864 0 Translocation 0 LOC_Os12g08710 expressed protein FN2279-S Chr12 8928036 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g15630 retrotransposon protein, putative, unclassified, expressed FN2279-S Chr2 107957 284982 0 0 Inversion 0 FN2279-S Chr2 107957 284982 0 0 Inversion 0 LOC_Os02g01490 expressed protein FN2279-S Chr2 109776 284983 0 0 Inversion 0 FN2279-S Chr2 109776 284983 0 0 Inversion 0 LOC_Os02g01490 expressed protein FN2279-S Chr2 20394886 20394892 0 0 Deletion 6 HET FN2279-S Chr2 2585902 C-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr2 2585903 G-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr2 2999868 2999881 0 0 Deletion 13 Homo FN2279-S Chr3 14316094 14316096 0 0 Insertion 2 HET FN2279-S Chr3 16309531 C-T 0 0 Single Base Substitution 0 HET FN2279-S Chr3 24425352 A-T 0 0 Single Base Substitution 0 HET FN2279-S Chr3 30215260 T-C 0 0 Single Base Substitution 0 HET FN2279-S Chr3 32731431 32731432 0 0 Deletion 1 frameshift_variant HET LOC_Os03g57390 hypothetical protein FN2279-S Chr3 34948540 34948544 0 0 Deletion 4 frameshift_variant HET LOC_Os03g61660 retrotransposon protein, putative, unclassified, expressed FN2279-S Chr4 11579539 11579543 0 0 Deletion 4 Homo FN2279-S Chr4 17054916 17168566 0 0 Inversion 0 FN2279-S Chr4 17054922 17168574 0 0 Inversion 0 FN2279-S Chr4 18422998 G-A 0 0 Single Base Substitution 0 HET FN2279-S Chr4 19938193 G-T 0 0 Single Base Substitution 0 HET FN2279-S Chr4 24825895 C-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr4 27339915 A-G 0 0 Single Base Substitution 0 HET FN2279-S Chr5 11725086 11725095 0 0 Deletion 9 Homo FN2279-S Chr5 12122345 C-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr5 14041055 T-A 0 0 Single Base Substitution 0 Homo FN2279-S Chr5 15329665 15829347 0 0 Inversion 0 FN2279-S Chr5 19279454 19279455 0 0 Deletion 1 Homo FN2279-S Chr5 20494055 C-T 0 0 Single Base Substitution 0 HET FN2279-S Chr5 21336043 T-C 0 0 Single Base Substitution 0 Homo FN2279-S Chr5 7611148 G-A 0 0 Single Base Substitution 0 HET FN2279-S Chr6 10103741 T-C 0 0 Single Base Substitution 0 HET FN2279-S Chr6 10419568 10419571 0 0 Deletion 3 HET FN2279-S Chr6 13234457 G-A 0 0 Single Base Substitution 0 HET FN2279-S Chr6 13416046 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g22980 CSLD5 - cellulose synthase-like family D, expressed FN2279-S Chr6 14988154 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g25640 retrotransposon protein, putative, unclassified FN2279-S Chr6 15736816 C-T 0 0 Single Base Substitution 0 HET FN2279-S Chr6 19717550 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g33890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2279-S Chr6 23150806 23150807 0 0 Deletion 1 HET FN2279-S Chr6 23166144 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g39020 retrotransposon protein, putative, unclassified, expressed FN2279-S Chr6 23166160 G-A 0 0 Single Base Substitution 0 HET FN2279-S Chr6 2719032 G-T 0 0 Single Base Substitution 0 HET FN2279-S Chr6 27465124 C-T 0 0 Single Base Substitution 0 HET FN2279-S Chr6 30822879 G-A 0 0 Single Base Substitution 0 HET FN2279-S Chr6 4429682 4429683 0 0 Deletion 1 Homo FN2279-S Chr6 6959951 C-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr6 9794993 Chr4 17545681 0 Translocation 0 FN2279-S Chr6 9794993 Chr4 17545681 0 Translocation 0 LOC_Os04g29530 retrotransposon protein, putative, unclassified, expressed FN2279-S Chr7 10486765 11372466 0 0 Inversion 0 FN2279-S Chr7 10486765 11372466 0 0 Inversion 0 LOC_Os07g19200 retrotransposon protein, putative, unclassified, expressed FN2279-S Chr7 10486767 11372468 0 0 Inversion 0 FN2279-S Chr7 10486767 11372468 0 0 Inversion 0 LOC_Os07g19200 retrotransposon protein, putative, unclassified, expressed FN2279-S Chr7 11598160 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g19570 expressed protein FN2279-S Chr7 19941630 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g33360 expressed protein FN2279-S Chr7 24259100 T-C 0 0 Single Base Substitution 0 Homo FN2279-S Chr7 6959001 6988000 0 0 Deletion 28999 LOC_Os07g12330 tryptophan/tyrosine permease family protein, putative, expressed FN2279-S Chr7 6959001 6988000 0 0 Deletion 28999 LOC_Os07g12340 NAC domain-containing protein 67, putative, expressed FN2279-S Chr7 8388856 8388858 0 0 Deletion 2 Homo FN2279-S Chr8 13609442 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g22620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2279-S Chr8 1727982 1727987 0 0 Deletion 5 Homo FN2279-S Chr8 18808807 C-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr8 19172575 C-T 0 0 Single Base Substitution 0 HET FN2279-S Chr8 20660875 G-T 0 0 Single Base Substitution 0 HET FN2279-S Chr8 20998792 20998809 0 0 Deletion 17 Homo FN2279-S Chr8 25361005 25361006 0 0 Insertion 1 frameshift_variant HET LOC_Os08g40050 retrotransposon protein, putative, unclassified, expressed FN2279-S Chr8 26066163 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g41270 endonuclease/exonuclease/phosphatase family domain containing protein, expressed FN2279-S Chr8 2871634 2871636 0 0 Insertion 2 HET FN2279-S Chr8 3347906 3347908 0 0 Insertion 2 HET FN2279-S Chr8 3454627 A-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr8 844605 844613 0 0 Deletion 8 Homo FN2279-S Chr8 9191549 C-T 0 0 Single Base Substitution 0 Homo FN2279-S Chr9 17469763 G-A 0 0 Single Base Substitution 0 Homo FN2279-S Chr9 17469764 G-C 0 0 Single Base Substitution 0 Homo FN2279-S Chr9 18290035 18290036 0 0 Deletion 1 Homo FN2279-S Chr9 20204810 20204814 0 0 Deletion 4 Homo FN2279-S Chr9 21019259 C-T 0 0 Single Base Substitution 0 Homo