FN2308 Chr1 1785716 1785720 0 0 Deletion 4 HET FN2308 Chr1 21204751 T-C 0 0 Single Base Substitution 0 HET FN2308 Chr1 29718367 29946688 0 0 Inversion 0 FN2308 Chr1 29718367 29946688 0 0 Inversion 0 LOC_Os01g52070 potassium channel AKT1, putative, expressed FN2308 Chr1 29946697 29969693 0 0 Inversion 0 LOC_Os01g52070 potassium channel AKT1, putative, expressed FN2308 Chr1 29946697 29969693 0 0 Inversion 0 LOC_Os01g52110 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed FN2308 Chr1 34402673 34402687 0 0 Deletion 14 HET FN2308 Chr1 40148264 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g69080 acyl-desaturase, chloroplast precursor, putative, expressed FN2308 Chr1 40148660 T-A 0 0 Single Base Substitution 0 HET FN2308 Chr1 9431200 T-C 0 0 Single Base Substitution 0 Homo FN2308 Chr10 12896380 C-T 0 0 Single Base Substitution 0 HET FN2308 Chr10 15697533 15697705 0 0 Inversion 0 FN2308 Chr10 19240969 19240982 0 0 Deletion 13 Homo FN2308 Chr10 19418877 C-T 0 0 Single Base Substitution 0 HET FN2308 Chr10 21860273 T-A 0 0 Single Base Substitution 0 HET FN2308 Chr10 7998828 G-A 0 0 Single Base Substitution 0 HET FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22560 retrotransposon protein, putative, Ty3-gypsy subclass FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22580 retrotransposon protein, putative, unclassified, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22590 retrotransposon protein, putative, Ty1-copia subclass FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22600 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22610 retrotransposon, putative, centromere-specific, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22620 retrotransposon protein, putative, LINE subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22630 expressed protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22640 retrotransposon protein, putative, unclassified, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22650 expressed protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22660 expressed protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22670 retrotransposon protein, putative, unclassified, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22690 retrotransposon protein, putative, unclassified, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22700 retrotransposon protein, putative, unclassified, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22710 retrotransposon protein, putative, unclassified, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22720 retrotransposon protein, putative, Ty3-gypsy subclass FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22730 retrotransposon protein, putative, unclassified FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22740 retrotransposon protein, putative, Ty3-gypsy subclass FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22750 retrotransposon protein, putative, Ty3-gypsy subclass FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22760 hypothetical protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22770 expressed protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22780 retrotransposon, putative, centromere-specific, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22800 expressed protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22820 retrotransposon protein, putative, unclassified FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22840 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22860 expressed protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22880 retrotransposon, putative, centromere-specific FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22890 expressed protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22920 retrotransposon protein, putative, unclassified, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22950 retrotransposon, putative, centromere-specific, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22960 expressed protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22970 expressed protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g22980 transposon protein, putative, CACTA, En/Spm sub-class FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g23000 expressed protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g23010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g23020 transposon protein, putative, CACTA, En/Spm sub-class FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g23030 expressed protein FN2308 Chr11 12955001 13254000 0 0 Deletion 298999 LOC_Os11g23040 retrotransposon protein, putative, unclassified, expressed FN2308 Chr11 14457576 G-T 0 0 Single Base Substitution 0 HET FN2308 Chr11 26258817 Chr4 6929825 0 Translocation 0 LOC_Os11g43490 expressed protein FN2308 Chr11 7428539 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g13540 serpin domain containing protein, putative, expressed FN2308 Chr12 22800257 Chr8 3875843 0 Translocation 0 LOC_Os12g37180 transposon protein, putative, CACTA, En/Spm sub-class FN2308 Chr12 3295135 T-A 0 0 Single Base Substitution 0 HET FN2308 Chr2 29978106 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g49030 tyrosyl-tRNA synthetase, putative, expressed FN2308 Chr2 315333 G-C 0 0 Single Base Substitution 0 HET FN2308 Chr2 7117342 G-A 0 0 Single Base Substitution 0 Homo FN2308 Chr3 16116354 16826813 0 0 Inversion 0 FN2308 Chr3 16116354 16826813 0 0 Inversion 0 LOC_Os03g29520 retrotransposon protein, putative, unclassified, expressed FN2308 Chr3 16116383 16826837 0 0 Inversion 0 FN2308 Chr3 16116383 16826837 0 0 Inversion 0 LOC_Os03g29520 retrotransposon protein, putative, unclassified, expressed FN2308 Chr3 1623245 A-T 0 0 Single Base Substitution 0 HET FN2308 Chr3 19705327 T-C 0 0 Single Base Substitution 0 Homo FN2308 Chr3 26358561 A-T 0 0 Single Base Substitution 0 Homo FN2308 Chr3 26885577 26885585 0 0 Deletion 8 Homo FN2308 Chr3 28461453 28461454 0 0 Deletion 1 frameshift_variant HET LOC_Os03g49910 retrotransposon protein, putative, Ty1-copia subclass, expressed FN2308 Chr3 29778509 29778513 0 0 Insertion 4 HET FN2308 Chr3 6781105 C-A 0 0 Single Base Substitution 0 HET FN2308 Chr3 9525515 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g17150 ZOS3-09 - C2H2 zinc finger protein, expressed FN2308 Chr4 18298741 18298759 0 0 Deletion 18 disruptive_inframe_deletion Homo LOC_Os04g30640 retrotransposon protein, putative, Ty3-gypsy subclass FN2308 Chr4 2085649 C-G 0 0 Single Base Substitution 0 Homo FN2308 Chr4 23297364 A-T 0 0 Single Base Substitution 0 HET FN2308 Chr4 24854595 24854597 0 0 Insertion 2 HET FN2308 Chr4 7085170 7085185 0 0 Deletion 15 inframe_deletion Homo LOC_Os04g12830 expressed protein FN2308 Chr4 7317870 7317872 0 0 Deletion 2 frameshift_variant Homo LOC_Os04g13220 ABC transporter family protein, putative, expressed FN2308 Chr4 8903454 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g16380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2308 Chr5 12758792 12758793 0 0 Insertion 1 HET FN2308 Chr5 14939115 C-T 0 0 Single Base Substitution 0 HET FN2308 Chr5 19126989 C-T 0 0 Single Base Substitution 0 HET FN2308 Chr5 26243767 26243768 0 0 Deletion 1 Homo FN2308 Chr5 28762688 A-G 0 0 Single Base Substitution 0 Homo FN2308 Chr5 3930840 3930845 0 0 Deletion 5 HET FN2308 Chr5 4248823 G-A 0 0 Single Base Substitution 0 HET FN2308 Chr5 6933730 A-T 0 0 Single Base Substitution 0 HET FN2308 Chr5 8028565 C-T 0 0 Single Base Substitution 0 HET FN2308 Chr6 21683045 A-T 0 0 Single Base Substitution 0 Homo FN2308 Chr6 24953148 C-A 0 0 Single Base Substitution 0 HET FN2308 Chr6 7649538 Chr5 27086121 0 Translocation 0 LOC_Os05g46770 expressed protein FN2308 Chr6 7649538 Chr5 27086121 0 Translocation 0 LOC_Os06g13810 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed FN2308 Chr6 7661730 Chr5 27086104 0 Translocation 0 LOC_Os05g46770 expressed protein FN2308 Chr6 7661730 Chr5 27086104 0 Translocation 0 LOC_Os06g13820 dynamin, putative, expressed FN2308 Chr7 14966039 C-T 0 0 Single Base Substitution 0 HET FN2308 Chr8 14969694 14969700 0 0 Deletion 6 HET FN2308 Chr8 16036186 G-T 0 0 Single Base Substitution 0 HET FN2308 Chr8 17550670 C-T 0 0 Single Base Substitution 0 HET FN2308 Chr8 19173473 19173475 0 0 Deletion 2 HET FN2308 Chr8 21392562 C-A 0 0 Single Base Substitution 0 HET FN2308 Chr8 28370803 28370807 0 0 Insertion 4 HET FN2308 Chr8 6633947 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g11280 retrotransposon protein, putative, Ty3-gypsy subclass FN2308 Chr8 8233340 A-G 0 0 Single Base Substitution 0 HET FN2308 Chr8 8335318 Chr7 3171880 0 Translocation 0 FN2308 Chr8 8335318 Chr7 3171880 0 Translocation 0 LOC_Os07g06530 expressed protein FN2308 Chr8 9176022 T-C 0 0 Single Base Substitution 0 HET FN2308 Chr9 15275474 T-C 0 0 Single Base Substitution 0 HET FN2308 Chr9 18820774 T-A 0 0 Single Base Substitution 0 HET FN2308 Chr9 5439598 G-A 0 0 Single Base Substitution 0 HET FN2308 Chr9 6132816 A-T 0 0 Single Base Substitution 0 HET FN2308 Chr9 6735634 G-C 0 0 Single Base Substitution 0 HET FN2308 Chr9 8717289 T-G 0 0 Single Base Substitution 0 HET