FN2344 Chr1 13013520 C-G 0 0 Single Base Substitution 0 HET FN2344 Chr1 30459598 30459606 0 0 Deletion 8 HET FN2344 Chr1 31479258 31479260 0 0 Insertion 2 Homo FN2344 Chr1 31718971 31718979 0 0 Deletion 8 frameshift_variant HET LOC_Os01g55120 expressed protein FN2344 Chr10 12026661 12026668 0 0 Deletion 7 Homo FN2344 Chr10 12823768 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g24910 retrotransposon protein, putative, unclassified, expressed FN2344 Chr10 13471033 G-A 0 0 Single Base Substitution 0 HET FN2344 Chr10 17201357 17201363 0 0 Deletion 6 Homo FN2344 Chr10 94869 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g01100 receptor-like protein kinase, putative, expressed FN2344 Chr11 1127846 A-T 0 0 Single Base Substitution 0 HET FN2344 Chr11 15445916 15445918 0 0 Insertion 2 HET FN2344 Chr11 1626220 T-C 0 0 Single Base Substitution 0 HET FN2344 Chr11 20195553 G-A 0 0 Single Base Substitution 0 HET FN2344 Chr11 21334766 C-A 0 0 Single Base Substitution 0 Homo FN2344 Chr11 21336215 21577990 0 0 Inversion 0 LOC_Os11g36240 pectinesterase, putative, expressed FN2344 Chr11 21336234 21585656 0 0 Inversion 0 LOC_Os11g36240 pectinesterase, putative, expressed FN2344 Chr11 21578004 22428696 0 0 Inversion 0 FN2344 Chr11 21578004 22428696 0 0 Inversion 0 LOC_Os11g37860 stripe rust resistance protein Yr10, putative, expressed FN2344 Chr11 21578762 22120447 0 0 Inversion 0 FN2344 Chr11 21906503 22127646 0 0 Inversion 0 LOC_Os11g37100 expressed protein FN2344 Chr11 21906512 22120447 0 0 Inversion 0 LOC_Os11g37100 expressed protein FN2344 Chr12 18251797 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g30410 retrotransposon protein, putative, Ty3-gypsy subclass FN2344 Chr12 20982105 C-T 0 0 Single Base Substitution 0 HET FN2344 Chr2 11277000 C-T 0 0 Single Base Substitution 0 HET FN2344 Chr2 14716243 C-G 0 0 Single Base Substitution 0 Homo FN2344 Chr2 4353505 G-A 0 0 Single Base Substitution 0 Homo FN2344 Chr2 4540175 T-A 0 0 Single Base Substitution 0 Homo FN2344 Chr3 3110517 3110520 0 0 Deletion 3 HET FN2344 Chr3 633001 642000 0 0 Deletion 8999 LOC_Os03g02010 DNA methyltransferase protein, putative, expressed FN2344 Chr3 633001 642000 0 0 Deletion 8999 LOC_Os03g02020 stress responsive A/B Barrel domain containing protein, expressed FN2344 Chr3 633001 642000 0 0 Deletion 8999 LOC_Os03g02030 folylpolyglutamate synthase, mitochondrial precursor, putative, expressed FN2344 Chr4 11301287 11301292 0 0 Deletion 5 HET FN2344 Chr4 13532525 A-C 0 0 Single Base Substitution 0 Homo FN2344 Chr4 6583001 6600000 0 0 Deletion 16999 LOC_Os04g12000 retrotransposon protein, putative, unclassified, expressed FN2344 Chr4 6583001 6600000 0 0 Deletion 16999 LOC_Os04g12010 glycosyltransferase, putative, expressed FN2344 Chr4 6583001 6600000 0 0 Deletion 16999 LOC_Os04g12020 hypothetical protein FN2344 Chr4 6603353 G-T 0 0 Single Base Substitution 0 HET FN2344 Chr5 11809515 11809517 0 0 Deletion 2 frameshift_variant Homo LOC_Os05g20170 retrotransposon protein, putative, Ty3-gypsy subclass FN2344 Chr5 25268172 25631740 0 0 Inversion 0 LOC_Os05g43470 outer membrane protein, OMP85 family, putative, expressed FN2344 Chr5 25268172 25631740 0 0 Inversion 0 LOC_Os05g44080 transmembrane protein, putative, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43470 outer membrane protein, OMP85 family, putative, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43480 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43490 OsFBX169 - F-box domain containing protein, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43510 decarboxylase, putative, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43520 BSD, putative, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43530 CSLC7 - cellulose synthase-like family C, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43540 transmembrane protein 56, putative, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43550 Eukaryotic aspartyl protease domain containing protein, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43560 AGAP007115-PA, putative, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43570 AGC_AGC_other_NDRh_TRCd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43576 radical SAM enzyme, putative, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43582 tRNA methyltran, putative, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43590 serpin domain containing protein, putative, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43595 expressed protein FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43600 expressed protein FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43610 ATBARD1/BARD1, putative, expressed FN2344 Chr5 25271001 25372000 0 0 Deletion 100999 LOC_Os05g43630 transposon protein, putative, Pong sub-class, expressed FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43640 retrotransposon, putative, centromere-specific, expressed FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43650 expressed protein FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43660 expressed protein FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43670 IQ calmodulin-binding motif family protein, putative, expressed FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43680 expressed protein FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43690 glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43700 expressed protein FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43720 transposon protein, putative, unclassified FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43730 retrotransposon protein, putative, unclassified, expressed FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43740 retrotransposon protein, putative, unclassified, expressed FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43750 hypothetical protein FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43760 TCP family transcription factor, putative, expressed FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43770 NLI interacting factor-like phosphatase, putative, expressed FN2344 Chr5 25377001 25457000 0 0 Deletion 79999 LOC_Os05g43780 ESP1, putative, expressed FN2344 Chr5 25631747 25707016 0 0 Inversion 0 LOC_Os05g44080 transmembrane protein, putative, expressed FN2344 Chr5 728583 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g02270 retrotransposon protein, putative, unclassified FN2344 Chr5 8654875 C-T 0 0 Single Base Substitution 0 HET FN2344 Chr6 17290100 17290103 0 0 Deletion 3 Homo FN2344 Chr6 17423157 17423159 0 0 Deletion 2 HET FN2344 Chr6 24106892 24106897 0 0 Deletion 5 frameshift_variant Homo LOC_Os06g40460 expressed protein FN2344 Chr6 30465964 30465976 0 0 Deletion 12 Homo FN2344 Chr6 7519485 A-C 0 0 Single Base Substitution 0 HET FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13780 expressed protein FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13800 expressed protein FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13810 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13820 dynamin, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13830 endoglucanase, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13839 RNA recognition motif containing protein, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13850 OsFBX193 - F-box domain containing protein, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13860 RCD1, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13870 U-box protein CMPG1, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13880 expressed protein FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13890 expressed protein FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13900 transposon protein, putative, unclassified, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13910 expressed protein FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13940 expressed protein FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13950 pentatricopeptide, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13960 OsFBX194 - F-box domain containing protein, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13970 retrotransposon protein, putative, unclassified, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13980 hypothetical protein FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13990 OsFBX195 - F-box domain containing protein, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g13999 RNA recognition motif containing protein, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g14010 myb-like DNA-binding domain containing protein, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g14020 expressed protein FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g14030 potassium channel SKOR, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g14040 ThiF family domain containing protein, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g14050 membrane attack complex component/perforin/complement C9, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g14060 MBTB10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g14070 DUF581 domain containing protein, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g14080 ATMAP70 protein, putative, expressed FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g14090 expressed protein FN2344 Chr6 7639001 7863000 0 0 Deletion 223999 LOC_Os06g14100 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN2344 Chr6 7879001 7902000 0 0 Deletion 22999 LOC_Os06g14130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2344 Chr6 7879001 7902000 0 0 Deletion 22999 LOC_Os06g14140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2344 Chr6 7879001 7902000 0 0 Deletion 22999 LOC_Os06g14150 retrotransposon protein, putative, unclassified, expressed FN2344 Chr6 7879001 7902000 0 0 Deletion 22999 LOC_Os06g14160 retrotransposon protein, putative, unclassified, expressed FN2344 Chr7 28969172 28969174 0 0 Deletion 2 HET FN2344 Chr7 29111957 T-A 0 0 Single Base Substitution 0 HET FN2344 Chr7 4649205 G-T 0 0 Single Base Substitution 0 HET FN2344 Chr7 975658 A-G 0 0 Single Base Substitution 0 HET FN2344 Chr8 14198665 14198669 0 0 Deletion 4 Homo FN2344 Chr8 25836888 G-A 0 0 Single Base Substitution 0 HET FN2344 Chr8 27919722 A-T 0 0 Single Base Substitution 0 HET FN2344 Chr8 5638985 5638993 0 0 Deletion 8 Homo FN2344 Chr8 7142565 7142572 0 0 Deletion 7 Homo FN2344 Chr8 8049933 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os08g13540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN2344 Chr9 7415894 C-T 0 0 Single Base Substitution 0 HET